RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 TMEM206Q9H813 350 aa9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 SEPT9Q9UHD8 586 aaPredicted RBP9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 HPCAL4Q9UM19 191 aa9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 PIK3C2AO00443 1686 aa9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 WNT7AO00755 349 aa9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 ACSL3O95573 720 aa9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 CALRP27797 417 aaKnown RBP9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 MAGEA9P43362 315 aa9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 USP11P51784 963 aa9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 GRB10Q13322 594 aa9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 CCDC93Q567U6 631 aa9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 PPP1R18Q6NYC8 613 aa9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 CCDC89Q8N998 374 aa9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 TCP11Q8WWU5 503 aa9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 TBC1D31Q96DN5 1066 aa9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 DNAJC7Q99615 494 aa9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 REEP2Q9BRK0 252 aa9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 AZI2Q9H6S1 392 aa9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 ANKZF1Q9H8Y5 726 aa9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 TRPC5Q9UL62 973 aaPredicted RBP9.09□□□□□ -0.95
HNRNPU-222ENST00000639880 ECEL1O95672 775 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 UCHL3P15374 230 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 HERVK_113P62684 666 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 ATP11AP98196 1134 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 E2F5Q15329 346 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 TRAPPC11Q7Z392 1133 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 CCDC197Q8NCU1 140 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 FERMT1Q9BQL6 677 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 EDEM3Q9BZQ6 932 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 SEMA6BQ9H3T3 888 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 TAF1DQ9H5J8 278 aaPredicted RBP9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 DMGDHQ9UI17 866 aaKnown RBP9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 NOC2LQ9Y3T9 749 aaKnown RBP9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 UBR1Q8IWV7 1749 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 SSU72P8A0A1W2PR75 194 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 SART1O43290 800 aaKnown RBP9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 CACNA1FO60840 1977 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 MAGOHP61326 146 aaKnown RBP9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 GNPTABQ3T906 1256 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 RIC1Q4ADV7 1423 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 PADI6Q6TGC4 694 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 TADA2BQ86TJ2 420 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 DNAI2Q9GZS0 605 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 RAB20Q9NX57 234 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 KLHL14Q9P2G3 628 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 PLEKHG2Q9H7P9 1386 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 GPR75-ASB3A0A0A6YYF3 556 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 PIK3CAP42336 1068 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 EZH2Q15910 746 aaKnown RBP9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 AOC3Q16853 763 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 PODNQ7Z5L7 613 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 SRLQ86TD4 932 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 DDX42Q86XP3 938 aaKnown RBP eCLIP9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 CTAGE3PQ8IX95 158 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 RUNDC3BQ96NL0 473 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.08□□□□□ -0.963e-8■■■■□ 19.5
HNRNPU-222ENST00000639880 TXNDC16Q9P2K2 825 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 PCDHB4Q9Y5E5 795 aa9.08□□□□□ -0.96
HNRNPU-222ENST00000639880 ABCB11O95342 1321 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 A0A087X0T9 212 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 FAM237AA0A1B0GTK4 181 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 RASGRF2O14827 1237 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 C21orf2O43822 256 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 FTLP02792 175 aaPredicted RBP9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 FAM228BP0C875 321 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 MYBP10242 640 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 HOXA7P31268 230 aaPredicted RBP9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 MAP2K2P36507 400 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 SMC6Q96SB8 1091 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 VIPAS39Q9H9C1 493 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.07□□□□□ -0.961e-6■□□□□ 10.4
HNRNPU-222ENST00000639880 COL5A2P05997 1499 aaPredicted RBP9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 CLNS1AP54105 237 aaKnown RBP9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 MKRN4PQ13434 485 aaPredicted RBP9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 ZC2HC1CQ53FD0 456 aaPredicted RBP9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 FAM133BQ5BKY9 247 aaKnown RBP9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 FYB2Q5VWT5 728 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 ANKRD35Q8N283 1001 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 METTL13Q8N6R0 699 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 OR2W6PQ8NHA6 318 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 GRK7Q8WTQ7 553 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 ARHGEF2Q92974 986 aaKnown RBP9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 ZNF341Q9BYN7 854 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 ARHGAP20Q9P2F6 1191 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 FBXL5Q9UKA1 691 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 IPO5O00410 1097 aaKnown RBP9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 SLC16A4O15374 487 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 CYTH3O43739 400 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 ABL1P00519 1130 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 PRELPP51888 382 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 PPP4CP60510 307 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 KRT27Q7Z3Y8 459 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 DNAAF5Q86Y56 855 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 RHOT2Q8IXI1 618 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 MASTLQ96GX5 879 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 PAGR1Q9BTK6 254 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 HEMGNQ9BXL5 484 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 MLXIPLQ9NP71 852 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms