RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 CTAGE6Q86UF2 777 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 HOOK3Q86VS8 718 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 CTAGE4Q8IX94 777 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 TRMT44Q8IYL2 757 aaKnown RBP6.03□□□□□ -1.44
CHD2-227ENST00000637572 CERS5Q8N5B7 392 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 FTOQ9C0B1 505 aaKnown RBP eCLIP6.03□□□□□ -1.44
CHD2-227ENST00000637572 SMARCAD1Q9H4L7 1026 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 FANCLQ9NW38 375 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 TMEM260Q9NX78 707 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 H3BRB1 525 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 ASAP2O43150 1006 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 DTNBO60941 627 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 GH1P01241 217 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 SREBF1P36956 1147 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 MFAP3P55082 362 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 PPIL2Q13356 520 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 TAF12Q16514 161 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 PUS10Q3MIT2 529 aaKnown RBP6.03□□□□□ -1.44
CHD2-227ENST00000637572 CCDC122Q5T0U0 273 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 ZNF746Q6NUN9 644 aaPredicted RBP6.03□□□□□ -1.44
CHD2-227ENST00000637572 TMCO3Q6UWJ1 677 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 NIPA1Q7RTP0 329 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 TTC39CQ8N584 583 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 IPO4Q8TEX9 1081 aaKnown RBP6.03□□□□□ -1.44
CHD2-227ENST00000637572 ATG4CQ96DT6 458 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 NT5C1BQ96P26 610 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 RPS6KC1Q96S38 1066 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 MTRQ99707 1265 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 NUDT12Q9BQG2 462 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 EIF2AK1Q9BQI3 630 aaKnown RBP6.03□□□□□ -1.44
CHD2-227ENST00000637572 TUT1Q9H6E5 874 aaKnown RBP6.03□□□□□ -1.44
CHD2-227ENST00000637572 C17orf75Q9HAS0 396 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 FAM198AQ9UFP1 575 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 UBE4BO95155 1302 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 KIF28PB7ZC32 967 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 TLR3O15455 904 aaKnown RBP6.03□□□□□ -1.44
CHD2-227ENST00000637572 LPXNO60711 386 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 TDP2O95551 362 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 FERP16591 822 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 VCAM1P19320 739 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 POLR2BP30876 1174 aaKnown RBP6.03□□□□□ -1.44
CHD2-227ENST00000637572 AP3M2P53677 418 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 CTTNQ14247 550 aaKnown RBP6.03□□□□□ -1.44
CHD2-227ENST00000637572 NTRK3Q16288 839 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 MAPK6Q16659 721 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 CEP128Q6ZU80 1094 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 GJA10Q969M2 543 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 LXNQ9BS40 222 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 CRACR2AQ9BSW2 395 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 POLR3CQ9BUI4 534 aaPredicted RBP6.03□□□□□ -1.44
CHD2-227ENST00000637572 CCDC94Q9BW85 323 aaPredicted RBP6.03□□□□□ -1.44
CHD2-227ENST00000637572 DDX4Q9NQI0 724 aaKnown RBP6.03□□□□□ -1.44
CHD2-227ENST00000637572 ANKEF1Q9NU02 776 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 PRKAG2Q9UGJ0 569 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 ZDHHC9Q9Y397 364 aa6.03□□□□□ -1.44
CHD2-227ENST00000637572 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.03□□□□□ -1.44
CHD2-227ENST00000637572 POTEMA6NI47 508 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 ZNF233A6NK53 670 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 MAGEA1P43355 309 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 FCGRTP55899 365 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 KCNH2Q12809 1159 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 LAMC2Q13753 1193 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 TATDN1Q6P1N9 297 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 ACER1Q8TDN7 264 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 MAIP1Q8WWC4 291 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 HVCN1Q96D96 273 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 TRIM11Q96F44 468 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 DYDC2Q96IM9 177 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 SPATA33Q96N06 139 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 TOPORSQ9NS56 1045 aaPredicted RBP6.02□□□□□ -1.45
CHD2-227ENST00000637572 GJB4Q9NTQ9 266 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 NKRFO15226 690 aaKnown RBP eCLIP6.02□□□□□ -1.45
CHD2-227ENST00000637572 KRT19P08727 400 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 TXNP10599 105 aaKnown RBP6.02□□□□□ -1.45
CHD2-227ENST00000637572 TGFB3P10600 412 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 RPA1P27694 616 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 GBP2P32456 591 aaPredicted RBP6.02□□□□□ -1.45
CHD2-227ENST00000637572 RGS2P41220 211 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 SLC26A2P50443 739 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 STAT5BP51692 787 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 ZNF280AP59817 542 aaPredicted RBP6.02□□□□□ -1.45
CHD2-227ENST00000637572 IGBP1P78318 339 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 PRPF4BQ13523 1007 aaKnown RBP6.02□□□□□ -1.45
CHD2-227ENST00000637572 MXD4Q14582 209 aaPredicted RBP6.02□□□□□ -1.45
CHD2-227ENST00000637572 DPCR1Q3MIW9 517 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 SARM1Q6SZW1 724 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 EEPD1Q7L9B9 569 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 CCDC155Q8N6L0 562 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 UBL4BQ8N7F7 174 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 FAM193BQ96PV7 902 aaPredicted RBP6.02□□□□□ -1.45
CHD2-227ENST00000637572 UIMC1Q96RL1 719 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 TMUB1Q9BVT8 246 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 LSM14BQ9BX40 385 aaKnown RBP6.02□□□□□ -1.45
CHD2-227ENST00000637572 TYW1Q9NV66 732 aaKnown RBP6.02□□□□□ -1.45
CHD2-227ENST00000637572 GABBR1Q9UBS5 961 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 TAF6LQ9Y6J9 622 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 MEIS1O00470 390 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 CA12O43570 354 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 VEGFBP49765 207 aa6.02□□□□□ -1.45
CHD2-227ENST00000637572 MYL7Q01449 175 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms