RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 TMOD1P28289 359 aa21.4■■□□□ 1.02
CLN6-221ENST00000637494 MOXD1Q6UVY6 613 aa21.4■■□□□ 1.02
CLN6-221ENST00000637494 RDM1Q8NG50 284 aa21.4■■□□□ 1.02
CLN6-221ENST00000637494 AIFM3Q96NN9 605 aa21.4■■□□□ 1.02
CLN6-221ENST00000637494 AGO3Q9H9G7 860 aaKnown RBP21.4■■□□□ 1.02
CLN6-221ENST00000637494 PADI3Q9ULW8 664 aa21.4■■□□□ 1.02
CLN6-221ENST00000637494 SIP14410 1827 aa21.4■■□□□ 1.02
CLN6-221ENST00000637494 EYSQ5T1H1 3165 aa21.4■■□□□ 1.02
CLN6-221ENST00000637494 UNC80Q8N2C7 3258 aa21.39■■□□□ 1.02
CLN6-221ENST00000637494 CYP3A7-CYP3A51PA0A087WV96 503 aa21.39■■□□□ 1.01
CLN6-221ENST00000637494 ATP4AP20648 1035 aa21.39■■□□□ 1.01
CLN6-221ENST00000637494 CYP3A7P24462 503 aa21.39■■□□□ 1.01
CLN6-221ENST00000637494 NFX1Q12986 1120 aaKnown RBP21.39■■□□□ 1.01
CLN6-221ENST00000637494 EPC2Q52LR7 807 aa21.39■■□□□ 1.01
CLN6-221ENST00000637494 MIER3Q7Z3K6 550 aa21.39■■□□□ 1.01
CLN6-221ENST00000637494 TMEM192Q8IY95 271 aa21.39■■□□□ 1.01
CLN6-221ENST00000637494 MAP7D2Q96T17 732 aa21.39■■□□□ 1.01
CLN6-221ENST00000637494 NAP1L4Q99733 375 aaKnown RBP21.39■■□□□ 1.01
CLN6-221ENST00000637494 PHF20Q9BVI0 1012 aa21.39■■□□□ 1.01
CLN6-221ENST00000637494 BRMS1Q9HCU9 246 aa21.39■■□□□ 1.01
CLN6-221ENST00000637494 LRFN2Q9ULH4 789 aa21.39■■□□□ 1.01
CLN6-221ENST00000637494 KCNJ14Q9UNX9 436 aa21.39■■□□□ 1.01
CLN6-221ENST00000637494 COL4A6Q14031 1691 aa21.38■■□□□ 1.01
CLN6-221ENST00000637494 ADGRA3Q8IWK6 1321 aa21.38■■□□□ 1.01
CLN6-221ENST00000637494 RBAK-RBAKDNI3L0D1 243 aa21.38■■□□□ 1.01
CLN6-221ENST00000637494 M0R2N6 131 aa21.38■■□□□ 1.01
CLN6-221ENST00000637494 RPS6KA5O75582 802 aa21.38■■□□□ 1.01
CLN6-221ENST00000637494 TDP2O95551 362 aa21.38■■□□□ 1.01
CLN6-221ENST00000637494 C22orf31O95567 290 aa21.38■■□□□ 1.01
CLN6-221ENST00000637494 OATP04181 439 aa21.38■■□□□ 1.01
CLN6-221ENST00000637494 GPM6BQ13491 265 aa21.38■■□□□ 1.01
CLN6-221ENST00000637494 INF2Q27J81 1249 aa21.38■■□□□ 1.01
CLN6-221ENST00000637494 KIAA0319LQ8IZA0 1049 aa21.38■■□□□ 1.01
CLN6-221ENST00000637494 ZNF710Q8N1W2 664 aa21.38■■□□□ 1.01
CLN6-221ENST00000637494 HLA-CQ95604 372 aa21.38■■□□□ 1.01
CLN6-221ENST00000637494 UNC45AQ9H3U1 944 aa21.38■■□□□ 1.01
CLN6-221ENST00000637494 ORC3Q9UBD5 711 aaPredicted RBP21.38■■□□□ 1.01
CLN6-221ENST00000637494 DDX25Q9UHL0 483 aaKnown RBP21.38■■□□□ 1.01
CLN6-221ENST00000637494 GPR182O15218 404 aa21.37■■□□□ 1.01
CLN6-221ENST00000637494 MARCH6O60337 910 aa21.37■■□□□ 1.01
CLN6-221ENST00000637494 PSMD10O75832 226 aa21.37■■□□□ 1.01
CLN6-221ENST00000637494 PRKCEQ02156 737 aa21.37■■□□□ 1.01
CLN6-221ENST00000637494 BTG3Q14201 252 aaPredicted RBP21.37■■□□□ 1.01
CLN6-221ENST00000637494 LETM2Q2VYF4 491 aa21.37■■□□□ 1.01
CLN6-221ENST00000637494 NPAS4Q8IUM7 802 aa21.37■■□□□ 1.01
CLN6-221ENST00000637494 AKT3Q9Y243 479 aa21.37■■□□□ 1.01
CLN6-221ENST00000637494 MYH9P35579 1960 aaKnown RBP21.37■■□□□ 1.01
CLN6-221ENST00000637494 DENND3A2RUS2 1198 aa21.36■■□□□ 1.01
CLN6-221ENST00000637494 ZBTB42B2RXF5 422 aa21.36■■□□□ 1.01
CLN6-221ENST00000637494 H3BNC9 293 aa21.36■■□□□ 1.01
CLN6-221ENST00000637494 GCFC2P16383 781 aaKnown RBP21.36■■□□□ 1.01
CLN6-221ENST00000637494 CTNNB1P35222 781 aa21.36■■□□□ 1.01
CLN6-221ENST00000637494 NEK4P51957 841 aa21.36■■□□□ 1.01
CLN6-221ENST00000637494 CRYBB1P53674 252 aaPredicted RBP21.36■■□□□ 1.01
CLN6-221ENST00000637494 EFCAB12Q6NXP0 572 aa21.36■■□□□ 1.01
CLN6-221ENST00000637494 NEK8Q86SG6 692 aa21.36■■□□□ 1.01
CLN6-221ENST00000637494 MRPL38Q96DV4 380 aaKnown RBP21.36■■□□□ 1.01
CLN6-221ENST00000637494 CHD7Q9P2D1 2997 aa21.36■■□□□ 1.01
CLN6-221ENST00000637494 EDIL3O43854 480 aa21.35■■□□□ 1.01
CLN6-221ENST00000637494 RB1P06400 928 aa21.35■■□□□ 1.01
CLN6-221ENST00000637494 TBC1D8BQ0IIM8 1120 aa21.35■■□□□ 1.01
CLN6-221ENST00000637494 NPY5RQ15761 445 aa21.35■■□□□ 1.01
CLN6-221ENST00000637494 KIZQ2M2Z5 673 aa21.35■■□□□ 1.01
CLN6-221ENST00000637494 TMEM266Q2M3C6 531 aa21.35■■□□□ 1.01
CLN6-221ENST00000637494 TIGD5Q53EQ6 642 aa21.35■■□□□ 1.01
CLN6-221ENST00000637494 ADAMTS19Q8TE59 1207 aa21.35■■□□□ 1.01
CLN6-221ENST00000637494 MBOAT7Q96N66 472 aa21.35■■□□□ 1.01
CLN6-221ENST00000637494 C11orf84Q9BUA3 381 aaPredicted RBP21.35■■□□□ 1.01
CLN6-221ENST00000637494 NOC2LQ9Y3T9 749 aaKnown RBP21.35■■□□□ 1.01
CLN6-221ENST00000637494 DKC1O60832 514 aaKnown RBP eCLIP21.34■■□□□ 1.01
CLN6-221ENST00000637494 DGKIO75912 1065 aa21.34■■□□□ 1.01
CLN6-221ENST00000637494 VTNP04004 478 aa21.34■■□□□ 1.01
CLN6-221ENST00000637494 CLCN3P51790 818 aa21.34■■□□□ 1.01
CLN6-221ENST00000637494 TRIM29Q14134 588 aa21.34■■□□□ 1.01
CLN6-221ENST00000637494 XKR3Q5GH77 459 aa21.34■■□□□ 1.01
CLN6-221ENST00000637494 LINC01599Q8WXQ3 324 aa21.34■■□□□ 1.01
CLN6-221ENST00000637494 GTF3C6Q969F1 213 aa21.34■■□□□ 1.01
CLN6-221ENST00000637494 GJA10Q969M2 543 aa21.34■■□□□ 1.01
CLN6-221ENST00000637494 FAM20AQ96MK3 541 aa21.34■■□□□ 1.01
CLN6-221ENST00000637494 SCLT1Q96NL6 688 aa21.34■■□□□ 1.01
CLN6-221ENST00000637494 PPP1R16BQ96T49 567 aa21.34■■□□□ 1.01
CLN6-221ENST00000637494 OSMRQ99650 979 aa21.34■■□□□ 1.01
CLN6-221ENST00000637494 C1orf112Q9NSG2 853 aa21.34■■□□□ 1.01
CLN6-221ENST00000637494 SEPT9Q9UHD8 586 aaPredicted RBP21.34■■□□□ 1.01
CLN6-221ENST00000637494 ZNF862O60290 1169 aa21.33■■□□□ 1.01
CLN6-221ENST00000637494 CCNT1O60563 726 aaKnown RBP21.33■■□□□ 1.01
CLN6-221ENST00000637494 IBSPP21815 317 aaPredicted RBP21.33■■□□□ 1.01
CLN6-221ENST00000637494 KRT2P35908 639 aa21.33■■□□□ 1.01
CLN6-221ENST00000637494 BMPR1AP36894 532 aa21.33■■□□□ 1.01
CLN6-221ENST00000637494 TFF2Q03403 129 aa21.33■■□□□ 1.01
CLN6-221ENST00000637494 PPP4R3AQ6IN85 833 aa21.33■■□□□ 1.01
CLN6-221ENST00000637494 PIK3AP1Q6ZUJ8 805 aa21.33■■□□□ 1.01
CLN6-221ENST00000637494 RTN4RL1Q86UN2 441 aaPredicted RBP21.33■■□□□ 1.01
CLN6-221ENST00000637494 CMTR2Q8IYT2 770 aaKnown RBP21.33■■□□□ 1.01
CLN6-221ENST00000637494 NECAB1Q8N987 351 aa21.33■■□□□ 1.01
CLN6-221ENST00000637494 ETNPPLQ8TBG4 499 aa21.33■■□□□ 1.01
CLN6-221ENST00000637494 ZNF689Q96CS4 500 aaPredicted RBP21.33■■□□□ 1.01
CLN6-221ENST00000637494 CDHR5Q9HBB8 845 aa21.33■■□□□ 1.01
CLN6-221ENST00000637494 ERVK-5Q9HDB9 667 aa21.33■■□□□ 1.01
CLN6-221ENST00000637494 ST3GAL5Q9UNP4 418 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms