RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 ITIH3Q06033 890 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 SCRN1Q12765 414 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 PKP1Q13835 747 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 KCNC3Q14003 757 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 GRIK4Q16099 956 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 TPRNQ4KMQ1 711 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 IFIT1BQ5T764 474 aaKnown RBP8.43□□□□□ -1.06
CIITA-214ENST00000636238 NFXL1Q6ZNB6 911 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 CYFIP1Q7L576 1253 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 ZNF710Q8N1W2 664 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 IL31RAQ8NI17 732 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 SEPT1Q8WYJ6 367 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 GTF3C6Q969F1 213 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 NKD2Q969F2 451 aaPredicted RBP8.43□□□□□ -1.06
CIITA-214ENST00000636238 INTS4Q96HW7 963 aaKnown RBP8.43□□□□□ -1.06
CIITA-214ENST00000636238 TMEM87BQ96K49 555 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 RPGRIP1Q96KN7 1286 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 OSBPL7Q9BZF2 842 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 S1PR5Q9H228 398 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 CPVLQ9H3G5 476 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 LY9Q9HBG7 655 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 PUF60Q9UHX1 559 aaKnown RBP8.43□□□□□ -1.06
CIITA-214ENST00000636238 BARX2Q9UMQ3 279 aaPredicted RBP8.43□□□□□ -1.06
CIITA-214ENST00000636238 TRPC6Q9Y210 931 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 IGSF9BQ9UPX0 1349 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 FAM186AA6NE01 2351 aa8.43□□□□□ -1.06
CIITA-214ENST00000636238 MYH15Q9Y2K3 1946 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 GOLGA8BA8MQT2 603 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 HOXA2O43364 376 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 JAK2O60674 1132 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 PPP1R11O60927 126 aaPredicted RBP8.42□□□□□ -1.06
CIITA-214ENST00000636238 PPFIA3O75145 1194 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 LAG3P18627 525 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 RXRAP19793 462 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 SMARCA1P28370 1054 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 GJB2P29033 226 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 HOXA13P31271 388 aaPredicted RBP8.42□□□□□ -1.06
CIITA-214ENST00000636238 ID4P47928 161 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 SARSP49591 514 aaKnown RBP8.42□□□□□ -1.06
CIITA-214ENST00000636238 SLC26A2P50443 739 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 PAK2Q13177 524 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 WTAPQ15007 396 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 ASTLQ6HA08 431 aaPredicted RBP8.42□□□□□ -1.06
CIITA-214ENST00000636238 ANKRD54Q6NXT1 300 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 ADGRD2Q7Z7M1 963 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 ZBTB33Q86T24 672 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 PLCD3Q8N3E9 789 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 FBXL16Q8N461 479 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 MICAL1Q8TDZ2 1067 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 CASP10Q92851 521 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 CUL5Q93034 780 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 ZNF274Q96GC6 653 aaPredicted RBP8.42□□□□□ -1.06
CIITA-214ENST00000636238 BORCS6Q96GS4 357 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 MYL10Q9BUA6 226 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 ELAC1Q9H777 363 aaKnown RBP8.42□□□□□ -1.06
CIITA-214ENST00000636238 VAT1LQ9HCJ6 419 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 MAD2L2Q9UI95 211 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 LRFN2Q9ULH4 789 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 CIZ1Q9ULV3 898 aaPredicted RBP8.42□□□□□ -1.06
CIITA-214ENST00000636238 USTQ9Y2C2 406 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.42□□□□□ -1.06
CIITA-214ENST00000636238 PCDHA2Q9Y5H9 948 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 TRPV2Q9Y5S1 764 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 CDY2AQ9Y6F7 541 aa8.42□□□□□ -1.06
CIITA-214ENST00000636238 TRIP12Q14669 1992 aaPredicted RBP8.41□□□□□ -1.06
CIITA-214ENST00000636238 SMIM35A0A1B0GVV1 85 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 ERICH2A1L162 156 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 CCDC69A6NI79 296 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 H0Y858 1186 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 FGF18O76093 207 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 CTDNEP1O95476 244 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 CD52P31358 61 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 TCF7P36402 384 aaPredicted RBP8.41□□□□□ -1.06
CIITA-214ENST00000636238 MTHFRP42898 656 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 FOSBP53539 338 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 EVCP57679 992 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 SEMA3FQ13275 785 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 BMS1Q14692 1282 aaKnown RBP8.41□□□□□ -1.06
CIITA-214ENST00000636238 GRM4Q14833 912 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 SEC23AQ15436 765 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 MARCH8Q5T0T0 291 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 UTP14CQ5TAP6 766 aaKnown RBP8.41□□□□□ -1.06
CIITA-214ENST00000636238 CES5AQ6NT32 575 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 RUFY4Q6ZNE9 571 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 ASCL5Q7RTU5 278 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 PLPPR4Q7Z2D5 763 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 TRIM50Q86XT4 487 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 ZDHHC14Q8IZN3 488 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 KREMEN2Q8NCW0 462 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 DNAJB3Q8WWF6 145 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 LINC01599Q8WXQ3 324 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 MAP3K14Q99558 947 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 AGO3Q9H9G7 860 aaKnown RBP8.41□□□□□ -1.06
CIITA-214ENST00000636238 FAM86C1Q9NVL1 165 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 PADI3Q9ULW8 664 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 ZDHHC9Q9Y397 364 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 PCDHB7Q9Y5E2 793 aa8.41□□□□□ -1.06
CIITA-214ENST00000636238 ZBTB43O43298 467 aa8.4□□□□□ -1.06
CIITA-214ENST00000636238 KCNA2P16389 499 aa8.4□□□□□ -1.06
CIITA-214ENST00000636238 ADD1P35611 737 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms