RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 C11orf74Q86VG3 221 aa8.68□□□□□ -1.02
SMARCA2-244ENST00000635659 KSR1Q8IVT5 923 aa8.68□□□□□ -1.02
SMARCA2-244ENST00000635659 CCDC103Q8IW40 242 aa8.68□□□□□ -1.02
SMARCA2-244ENST00000635659 DNAJC10Q8IXB1 793 aa8.68□□□□□ -1.02
SMARCA2-244ENST00000635659 ZNF655Q8N720 491 aaPredicted RBP8.68□□□□□ -1.02
SMARCA2-244ENST00000635659 GIMAP7Q8NHV1 300 aa8.68□□□□□ -1.02
SMARCA2-244ENST00000635659 DIO2Q92813 273 aa8.68□□□□□ -1.02
SMARCA2-244ENST00000635659 FCRL3Q96P31 734 aaPredicted RBP8.68□□□□□ -1.02
SMARCA2-244ENST00000635659 SLC13A1Q9BZW2 595 aa8.68□□□□□ -1.02
SMARCA2-244ENST00000635659 TCF7L1Q9HCS4 588 aa8.68□□□□□ -1.02
SMARCA2-244ENST00000635659 THG1LQ9NWX6 298 aaKnown RBP8.68□□□□□ -1.02
SMARCA2-244ENST00000635659 SOS1Q07889 1333 aaPredicted RBP8.68□□□□□ -1.02
SMARCA2-244ENST00000635659 USP42Q9H9J4 1324 aaKnown RBP8.68□□□□□ -1.02
SMARCA2-244ENST00000635659 COL15A1P39059 1388 aa8.68□□□□□ -1.02
SMARCA2-244ENST00000635659 SBF1O95248 1867 aa8.68□□□□□ -1.02
SMARCA2-244ENST00000635659 SHISA3A0PJX4 238 aa8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 GNAT3A8MTJ3 354 aa8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 PRPF3O43395 683 aaKnown RBP8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 U2AF1L5P0DN76 240 aaPredicted RBP8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 CYP19A1P11511 503 aaPredicted RBP8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 PLS3P13797 630 aa8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 YBX3P16989 372 aaKnown RBP eCLIP8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 YY1P25490 414 aa8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 U2AF1Q01081 240 aaKnown RBP eCLIP8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 FAM47CQ5HY64 1035 aa8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 SAMD3Q8N6K7 520 aa8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 PIWIL2Q8TC59 973 aaKnown RBP8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 CHTF18Q8WVB6 975 aa8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 LENG1Q96BZ8 264 aaPredicted RBP8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 SLC39A13Q96H72 371 aa8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 UBL7Q96S82 380 aaPredicted RBP8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 ZNF700Q9H0M5 742 aa8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 SPTLC3Q9NUV7 552 aa8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 NOP53Q9NZM5 478 aaKnown RBP8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 MKL2Q9ULH7 1088 aa8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 HEG1Q9ULI3 1381 aa8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 COMMD10Q9Y6G5 202 aa8.67□□□□□ -1.02
SMARCA2-244ENST00000635659 NUP98P52948 1817 aa8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 ADCY9O60503 1353 aa8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 LEFTY1O75610 366 aa8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 CBX7O95931 251 aa8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 MMP10P09238 476 aa8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 ZNF865P0CJ78 1059 aaPredicted RBP8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 SRGAP2CP0DJJ0 459 aa8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 ATP2A2P16615 1042 aaKnown RBP8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 MAP4P27816 1152 aaKnown RBP8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 KPNA1P52294 538 aaPredicted RBP8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 GRIK4Q16099 956 aa8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 CLEC16AQ2KHT3 1053 aa8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 EEF1DP3Q658K8 133 aa8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 FAM214BQ7L5A3 538 aa8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 FUBP3Q96I24 572 aaKnown RBP eCLIP8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 MYRFLQ96LU7 910 aa8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 SLC12A9Q9BXP2 914 aa8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 GPR62Q9BZJ7 368 aa8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 CLEC1BQ9P126 229 aa8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 SRP68Q9UHB9 627 aaKnown RBP8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 ZBTB1Q9Y2K1 713 aa8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 LUC7L2Q9Y383 392 aaKnown RBP8.66□□□□□ -1.02
SMARCA2-244ENST00000635659 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 FAM95CA0A1B0GW59 222 aa8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 RBAK-RBAKDNI3L0D1 243 aa8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 GSTA4O15217 222 aa8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 MYBL2P10244 700 aa8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 LCP1P13796 627 aa8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 IARSP41252 1262 aaKnown RBP8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 SESN3P58005 492 aa8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 DDR1Q08345 913 aa8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 KLF1Q13351 362 aaPredicted RBP8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 OS9Q13438 667 aaPredicted RBP8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 ZNF385CQ66K41 422 aaPredicted RBP8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 PPP4R4Q6NUP7 873 aa8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 ZNF790Q6PG37 636 aa8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 OVCH1Q7RTY7 1134 aa8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 DGKHQ86XP1 1220 aa8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 PANK1Q8TE04 598 aa8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 AHCYL2Q96HN2 611 aaKnown RBP8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 ZNF496Q96IT1 587 aaPredicted RBP8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 PLEKHF1Q96S99 279 aa8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 MMP19Q99542 508 aa8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 IP6K2Q9UHH9 426 aa8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 NUDCQ9Y266 331 aa8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 CCDC88AQ3V6T2 1871 aa8.65□□□□□ -1.02
SMARCA2-244ENST00000635659 ANKRD36CQ5JPF3 1778 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 TRBV23OR9-2A0A075B6M9 112 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 CCDC66A2RUB6 948 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 FZD9O00144 591 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 KCNQ3O43525 872 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 SNUPNO95149 360 aaKnown RBP8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 ZNF205O95201 554 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 SOD2P04179 222 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 SRFP11831 508 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 BMP3P12645 472 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 VAV1P15498 845 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 KRT85P78386 507 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 NRG1Q02297 640 aaPredicted RBP8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 TNK2Q07912 1038 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 TEFQ10587 303 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 TMEM240Q5SV17 173 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 PAOXQ6QHF9 649 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms