RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 BANK1Q8NDB2 785 aa16.49■□□□□ 0.23
PNKP-221ENST00000627317 FAM167AQ96KS9 214 aa16.49■□□□□ 0.23
PNKP-221ENST00000627317 EIF2AK1Q9BQI3 630 aaKnown RBP16.49■□□□□ 0.23
PNKP-221ENST00000627317 MYH9P35579 1960 aaKnown RBP16.49■□□□□ 0.23
PNKP-221ENST00000627317 GRXCR1A8MXD5 290 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 RBAK-RBAKDNI3L0D1 243 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 SPTLC2O15270 562 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 NBNO60934 754 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 CXCL10P02778 98 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 DNAJB2P25686 324 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 QARSP47897 775 aaKnown RBP16.48■□□□□ 0.23
PNKP-221ENST00000627317 PSMC5P62195 406 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 PRKCEQ02156 737 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 PDIA5Q14554 519 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 IL17AQ16552 155 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 HAUS3Q68CZ6 603 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 IGSF22Q8N9C0 903 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 RETREG2Q8NC44 543 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 LINC00301Q8NCQ3 95 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 ATP8B4Q8TF62 1192 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 LMBR1Q8WVP7 490 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 TNPO1Q92973 898 aaKnown RBP16.48■□□□□ 0.23
PNKP-221ENST00000627317 DYDC2Q96IM9 177 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 LXNQ9BS40 222 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 PBX4Q9BYU1 374 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 RNPEPQ9H4A4 650 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 RGL1Q9NZL6 768 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 MAFBQ9Y5Q3 323 aaPredicted RBP16.48■□□□□ 0.23
PNKP-221ENST00000627317 STK24Q9Y6E0 443 aa16.48■□□□□ 0.23
PNKP-221ENST00000627317 SCN5AQ14524 2016 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 POTEB3A0JP26 581 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 C17orf102A2RUQ5 167 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 ZNF862O60290 1169 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 OATP04181 439 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 PBX2P40425 430 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 PPFIA1Q13136 1202 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 PLCB4Q15147 1175 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 TCTN1Q2MV58 587 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 ZNF618Q5T7W0 954 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 ZNF697Q5TEC3 545 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 KRT79Q5XKE5 535 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 POTEBQ6S5H4 581 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 TRMT1LQ7Z2T5 733 aaKnown RBP16.47■□□□□ 0.23
PNKP-221ENST00000627317 DEFB128Q7Z7B8 93 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 TPH2Q8IWU9 490 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 KRI1Q8N9T8 703 aaKnown RBP16.47■□□□□ 0.23
PNKP-221ENST00000627317 KCNG4Q8TDN1 519 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 SNX29Q8TEQ0 813 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 AK8Q96MA6 479 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 SEMA6BQ9H3T3 888 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 ZSWIM4Q9H7M6 989 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 FBXO2Q9UK22 296 aaPredicted RBP16.47■□□□□ 0.23
PNKP-221ENST00000627317 STXBP5LQ9Y2K9 1186 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 MORC2Q9Y6X9 1032 aaPredicted RBP16.47■□□□□ 0.23
PNKP-221ENST00000627317 WDR81Q562E7 1941 aa16.47■□□□□ 0.23
PNKP-221ENST00000627317 PP2D1A8MPX8 630 aa16.46■□□□□ 0.23
PNKP-221ENST00000627317 TREHO43280 583 aa16.46■□□□□ 0.23
PNKP-221ENST00000627317 HBP1O60381 514 aa16.46■□□□□ 0.23
PNKP-221ENST00000627317 LONP1P36776 959 aaKnown RBP16.46■□□□□ 0.23
PNKP-221ENST00000627317 CCT6AP40227 531 aaKnown RBP16.46■□□□□ 0.23
PNKP-221ENST00000627317 MKRN4PQ13434 485 aaPredicted RBP16.46■□□□□ 0.23
PNKP-221ENST00000627317 CTTNQ14247 550 aaKnown RBP16.46■□□□□ 0.23
PNKP-221ENST00000627317 MTIF3Q9H2K0 278 aaKnown RBP16.46■□□□□ 0.23
PNKP-221ENST00000627317 TUFT1Q9NNX1 390 aa16.46■□□□□ 0.23
PNKP-221ENST00000627317 NRBP2Q9NSY0 501 aa16.46■□□□□ 0.23
PNKP-221ENST00000627317 SETD4Q9NVD3 440 aa16.46■□□□□ 0.23
PNKP-221ENST00000627317 SEPT9Q9UHD8 586 aaPredicted RBP16.46■□□□□ 0.23
PNKP-221ENST00000627317 SRPRBQ9Y5M8 271 aaKnown RBP16.46■□□□□ 0.23
PNKP-221ENST00000627317 TRANK1O15050 2925 aa16.45■□□□□ 0.22
PNKP-221ENST00000627317 MBLAC1A4D2B0 266 aaPredicted RBP16.45■□□□□ 0.22
PNKP-221ENST00000627317 PPP6R2O75170 966 aa16.45■□□□□ 0.22
PNKP-221ENST00000627317 PARNO95453 639 aaKnown RBP16.45■□□□□ 0.22
PNKP-221ENST00000627317 GNAT1P11488 350 aa16.45■□□□□ 0.22
PNKP-221ENST00000627317 ATP4AP20648 1035 aa16.45■□□□□ 0.22
PNKP-221ENST00000627317 IGBP1P78318 339 aa16.45■□□□□ 0.22
PNKP-221ENST00000627317 GRIN1Q05586 938 aa16.45■□□□□ 0.22
PNKP-221ENST00000627317 GRIK4Q16099 956 aa16.45■□□□□ 0.22
PNKP-221ENST00000627317 XKR3Q5GH77 459 aa16.45■□□□□ 0.22
PNKP-221ENST00000627317 MARCH8Q5T0T0 291 aa16.45■□□□□ 0.22
PNKP-221ENST00000627317 BBXQ8WY36 941 aaPredicted RBP16.45■□□□□ 0.22
PNKP-221ENST00000627317 CHAMP1Q96JM3 812 aa16.45■□□□□ 0.22
PNKP-221ENST00000627317 SPATA32Q96LK8 384 aa16.45■□□□□ 0.22
PNKP-221ENST00000627317 CCDC43Q96MW1 224 aaKnown RBP16.45■□□□□ 0.22
PNKP-221ENST00000627317 FAM161BQ96MY7 647 aa16.45■□□□□ 0.22
PNKP-221ENST00000627317 HSD17B14Q9BPX1 270 aa16.45■□□□□ 0.22
PNKP-221ENST00000627317 POLR3CQ9BUI4 534 aaPredicted RBP16.45■□□□□ 0.22
PNKP-221ENST00000627317 YBX2Q9Y2T7 364 aaKnown RBP16.45■□□□□ 0.22
PNKP-221ENST00000627317 NRCAMQ92823 1304 aa16.45■□□□□ 0.22
PNKP-221ENST00000627317 KDM3AQ9Y4C1 1321 aa16.45■□□□□ 0.22
PNKP-221ENST00000627317 COL1A2P08123 1366 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 RRN3P2A6NIE6 340 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 DDX11L8A8MPP1 907 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 CAND2O75155 1236 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 MED24O75448 989 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 SLITRK3O94933 977 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 INSRRP14616 1297 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 RPA1P27694 616 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 CDC25AP30304 524 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 UBA7P41226 1012 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 ME1P48163 572 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms