RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 PFKLP17858 780 aa4.58□□□□□ -1.68
CDKL5-208ENST00000624953 THBS2P35442 1172 aa4.58□□□□□ -1.68
CDKL5-208ENST00000624953 LACTBP83111 547 aaPredicted RBP4.58□□□□□ -1.68
CDKL5-208ENST00000624953 FOXO4P98177 505 aa4.58□□□□□ -1.68
CDKL5-208ENST00000624953 BMS1Q14692 1282 aaKnown RBP4.58□□□□□ -1.68
CDKL5-208ENST00000624953 CHRNA2Q15822 529 aa4.58□□□□□ -1.68
CDKL5-208ENST00000624953 FNDC3BQ53EP0 1204 aaKnown RBP4.58□□□□□ -1.68
CDKL5-208ENST00000624953 ARRDC4Q8NCT1 418 aa4.58□□□□□ -1.68
CDKL5-208ENST00000624953 PIP4K2CQ8TBX8 421 aa4.58□□□□□ -1.68
CDKL5-208ENST00000624953 ALG3Q92685 438 aa4.58□□□□□ -1.68
CDKL5-208ENST00000624953 AP5M1Q9H0R1 490 aa4.58□□□□□ -1.68
CDKL5-208ENST00000624953 BCAS3Q9H6U6 928 aa4.58□□□□□ -1.68
CDKL5-208ENST00000624953 PCDH18Q9HCL0 1135 aa4.58□□□□□ -1.68
CDKL5-208ENST00000624953 TRPC5Q9UL62 973 aaPredicted RBP4.58□□□□□ -1.68
CDKL5-208ENST00000624953 RGPD3A6NKT7 1758 aaPredicted RBP4.58□□□□□ -1.68
CDKL5-208ENST00000624953 COL14A1Q05707 1796 aaKnown RBP4.58□□□□□ -1.68
CDKL5-208ENST00000624953 RGPD4Q7Z3J3 1758 aa4.58□□□□□ -1.68
CDKL5-208ENST00000624953 GOLGB1Q14789 3259 aaKnown RBP4.57□□□□□ -1.68
CDKL5-208ENST00000624953 A0A1W2PQJ5 194 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 FAM83GA6ND36 823 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 FFAR3O14843 346 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 EFCAB14O75071 495 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 AMY2AP04746 511 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 INHBBP09529 407 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 AMY2BP19961 511 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 ZNF385BQ569K4 471 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 STEAP3Q658P3 488 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 ETV3LQ6ZN32 361 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 SH3TC2Q8TF17 1288 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 KCNC2Q96PR1 638 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 GORASP1Q9BQQ3 440 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 JAM3Q9BX67 310 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 ZSWIM4Q9H7M6 989 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 IPPKQ9H8X2 491 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 SPATA6Q9NWH7 488 aaPredicted RBP4.57□□□□□ -1.68
CDKL5-208ENST00000624953 DTLQ9NZJ0 730 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 RAPGEFL1Q9UHV5 662 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 CNOT6Q9ULM6 557 aaKnown RBP4.57□□□□□ -1.68
CDKL5-208ENST00000624953 COA3Q9Y2R0 106 aaPredicted RBP4.57□□□□□ -1.68
CDKL5-208ENST00000624953 RGPD5Q99666 1765 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 PEAK1Q9H792 1746 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 MYOM1P52179 1685 aa4.57□□□□□ -1.68
CDKL5-208ENST00000624953 TCRBV16S1A1N1A0A5B0 115 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 ZNF561-AS1K7EIQ3 104 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 NKRFO15226 690 aaKnown RBP eCLIP4.56□□□□□ -1.68
CDKL5-208ENST00000624953 DGKIO75912 1065 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 NAT1P18440 290 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 LIMS1P48059 325 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 ITGA1P56199 1179 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 PAK1Q13153 545 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 ADAM9Q13443 819 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 RTP5Q14D33 572 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 TMEM132EQ6IEE7 984 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 CNKSR3Q6P9H4 555 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 ABHD17CQ6PCB6 329 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 FGD2Q7Z6J4 655 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 JAZF1Q86VZ6 243 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 TMEM151BQ8IW70 566 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 LINC01356Q8N9X3 169 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.56□□□□□ -1.68
CDKL5-208ENST00000624953 SMARCC2Q8TAQ2 1214 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 USP33Q8TEY7 942 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 MRFAP1L1Q96HT8 127 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 C20orf173Q96LM9 149 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 CLUHP3Q96NS8 147 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 NOX5Q96PH1 765 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 CDC6Q99741 560 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 ORAI3Q9BRQ5 295 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 SMURF1Q9HCE7 757 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 MYOTQ9UBF9 498 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 PPP1R1BQ9UD71 204 aaPredicted RBP4.56□□□□□ -1.68
CDKL5-208ENST00000624953 PCDHB4Q9Y5E5 795 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 ADGRB2O60241 1585 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 TUBGCP6Q96RT7 1819 aa4.56□□□□□ -1.68
CDKL5-208ENST00000624953 AKAP12Q02952 1782 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 FAM47E-STBD1D6RA91 191 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 RFXAPO00287 272 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 ENPP3O14638 875 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 TRIM13O60858 407 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 CRTAMO95727 393 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 MECP2P51608 486 aaKnown RBP4.55□□□□□ -1.68
CDKL5-208ENST00000624953 CIAPIN1Q6FI81 312 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 TEPPQ6URK8 271 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 HHIPL2Q6UWX4 724 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 C16orf59Q7L2K0 433 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 OTOP1Q7RTM1 612 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 BRAPQ7Z569 592 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 MILR1Q7Z6M3 343 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 SYNPOQ8N3V7 929 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 FAM26EQ8N5C1 309 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 CLEC4DQ8WXI8 215 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 C11orf84Q9BUA3 381 aaPredicted RBP4.55□□□□□ -1.68
CDKL5-208ENST00000624953 CELF4Q9BZC1 486 aaKnown RBP4.55□□□□□ -1.68
CDKL5-208ENST00000624953 NGRNQ9NPE2 291 aaKnown RBP4.55□□□□□ -1.68
CDKL5-208ENST00000624953 BTG4Q9NY30 223 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 CBLCQ9ULV8 474 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 SRPK3Q9UPE1 567 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 COL24A1Q17RW2 1714 aa4.55□□□□□ -1.68
CDKL5-208ENST00000624953 PARP4Q9UKK3 1724 aaKnown RBP4.55□□□□□ -1.68
CDKL5-208ENST00000624953 DISP2A7MBM2 1401 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms