RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 C7orf61Q8IZ16 206 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 OTUD6BQ8N6M0 293 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 BEST2Q8NFU1 509 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 C7orf43Q8WVR3 580 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 GRPEL1Q9HAV7 217 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 TRAPPC3O43617 180 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 KIF5CO60282 957 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 BRD1O95696 1058 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 PRKCBP05771 671 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 PTPREP23469 700 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 CDR1P51861 262 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 NDUFA8P51970 172 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 FMNL3Q8IVF7 1028 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 LRRC4Q9HBW1 653 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 METTL14Q9HCE5 456 aaKnown RBP9.92□□□□□ -0.82
HDAC9-229ENST00000622668 IFNKQ9P0W0 207 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 USTQ9Y2C2 406 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 FAM205CA6NFA0 338 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 TSPY1Q01534 308 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 METTL7BQ6UX53 244 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 DDX12PQ92771 950 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 TYW5A2RUC4 315 aaKnown RBP9.92□□□□□ -0.82
HDAC9-229ENST00000622668 NPM3O75607 178 aaKnown RBP9.92□□□□□ -0.82
HDAC9-229ENST00000622668 CD2BP2O95400 341 aaKnown RBP9.92□□□□□ -0.82
HDAC9-229ENST00000622668 ITGA4P13612 1032 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 MXD4Q14582 209 aaPredicted RBP9.92□□□□□ -0.82
HDAC9-229ENST00000622668 TMC7Q7Z402 723 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 SFR1Q86XK3 245 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 RPUSD2Q8IZ73 545 aaKnown RBP9.92□□□□□ -0.82
HDAC9-229ENST00000622668 KIF12Q96FN5 646 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 FAM213AQ9BRX8 229 aa9.92□□□□□ -0.82
HDAC9-229ENST00000622668 TRMT1Q9NXH9 659 aaKnown RBP9.92□□□□□ -0.82
HDAC9-229ENST00000622668 PABPN1LA6NDY0 278 aaKnown RBP9.91□□□□□ -0.82
HDAC9-229ENST00000622668 PAFAH1B1P43034 410 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 IFI16Q16666 785 aaKnown RBP9.91□□□□□ -0.82
HDAC9-229ENST00000622668 SCYL2Q6P3W7 929 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 LUZP1Q86V48 1076 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 COPS5Q92905 334 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 NT5C1BQ96P26 610 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 RIT2Q99578 217 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 TSPYL2Q9H2G4 693 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-229ENST00000622668 MAGEF1Q9HAY2 307 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 MSRAQ9UJ68 235 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 GOLGA6L9A6NEM1 432 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 GADD45BO75293 160 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-229ENST00000622668 ARP10275 920 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 BTG3Q14201 252 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-229ENST00000622668 SURF1Q15526 300 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 PTGISQ16647 500 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 SMYD4Q8IYR2 804 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-229ENST00000622668 TMEM199Q8N511 208 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 L3MBTL3Q96JM7 780 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-229ENST00000622668 MAK16Q9BXY0 300 aaKnown RBP9.91□□□□□ -0.82
HDAC9-229ENST00000622668 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.91□□□□□ -0.82
HDAC9-229ENST00000622668 PCDHA5Q9Y5H7 936 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 CNTNAP5Q8WYK1 1306 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 PTPRZ1P23471 2315 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-229ENST00000622668 ZSCAN12O43309 604 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 N4BP1O75113 896 aaKnown RBP9.91□□□□□ -0.82
HDAC9-229ENST00000622668 LDHAP00338 332 aaKnown RBP9.91□□□□□ -0.82
HDAC9-229ENST00000622668 TGFB3P10600 412 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 EFNA5P52803 228 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 EVX2Q03828 476 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 VEPH1Q14D04 833 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 EMC2Q15006 297 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 ZNF394Q53GI3 561 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 LINC00301Q8NCQ3 95 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 PURBQ96QR8 312 aaKnown RBP9.91□□□□□ -0.82
HDAC9-229ENST00000622668 PCDHB4Q9Y5E5 795 aa9.91□□□□□ -0.82
HDAC9-229ENST00000622668 PPFIA4O75335 1185 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 GNA14O95837 355 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 SMARCA1P28370 1054 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 PSMC2P35998 433 aaKnown RBP9.9□□□□□ -0.82
HDAC9-229ENST00000622668 MXI1P50539 228 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 PRMT2P55345 433 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 ZSCAN23Q3MJ62 389 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 ZNF667Q5HYK9 610 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 ZNF296Q8WUU4 475 aaPredicted RBP9.9□□□□□ -0.82
HDAC9-229ENST00000622668 OSMRQ99650 979 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 MAGED2Q9UNF1 606 aaPredicted RBP9.9□□□□□ -0.82
HDAC9-229ENST00000622668 SRPRBQ9Y5M8 271 aaKnown RBP9.9□□□□□ -0.82
HDAC9-229ENST00000622668 GPR182O15218 404 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 SPOPO43791 374 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 VTNP04004 478 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 OATP04181 439 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 INSRRP14616 1297 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 TSGA10IPQ3SY00 556 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 IQCEQ6IPM2 695 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 DNAJB3Q8WWF6 145 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 ACAP3Q96P50 834 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 MAP3K14Q99558 947 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 ZMYND12Q9H0C1 365 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 PRRG1O14668 218 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 ZC3H11AO75152 810 aaKnown RBP eCLIP9.9□□□□□ -0.82
HDAC9-229ENST00000622668 PPP6R2O75170 966 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 CSDE1O75534 798 aaKnown RBP9.9□□□□□ -0.82
HDAC9-229ENST00000622668 DNAJB2P25686 324 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 MFSD10Q14728 455 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 GBP6Q6ZN66 633 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 HAUS6Q7Z4H7 955 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms