RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 EPHA7Q15375 998 aa13.12□□□□□ -0.31
TP53-227ENST00000622645 SPDYE2Q495Y8 402 aa13.12□□□□□ -0.31
TP53-227ENST00000622645 HSP90B2PQ58FF3 399 aa13.12□□□□□ -0.31
TP53-227ENST00000622645 GJB7Q6PEY0 223 aa13.12□□□□□ -0.31
TP53-227ENST00000622645 ZNF572Q7Z3I7 529 aaPredicted RBP13.12□□□□□ -0.31
TP53-227ENST00000622645 LDHDQ86WU2 507 aa13.12□□□□□ -0.31
TP53-227ENST00000622645 ZNF577Q9BSK1 485 aa13.12□□□□□ -0.31
TP53-227ENST00000622645 TUFT1Q9NNX1 390 aa13.12□□□□□ -0.31
TP53-227ENST00000622645 PLCB1Q9NQ66 1216 aa13.12□□□□□ -0.31
TP53-227ENST00000622645 PRELPP51888 382 aa13.12□□□□□ -0.31
TP53-227ENST00000622645 EN1Q05925 392 aaPredicted RBP13.12□□□□□ -0.31
TP53-227ENST00000622645 TRAF1Q13077 416 aa13.12□□□□□ -0.31
TP53-227ENST00000622645 SELENOOQ9BVL4 669 aa13.12□□□□□ -0.31
TP53-227ENST00000622645 UNC45AQ9H3U1 944 aa13.12□□□□□ -0.31
TP53-227ENST00000622645 LUC7LQ9NQ29 371 aaKnown RBP13.12□□□□□ -0.31
TP53-227ENST00000622645 MRPL11Q9Y3B7 192 aaKnown RBP13.12□□□□□ -0.31
TP53-227ENST00000622645 ZMYM2Q9UBW7 1377 aa13.11□□□□□ -0.31
TP53-227ENST00000622645 DDX39AO00148 427 aaKnown RBP13.11□□□□□ -0.31
TP53-227ENST00000622645 GAP43P17677 238 aa13.11□□□□□ -0.31
TP53-227ENST00000622645 PAFAH1B1P43034 410 aa13.11□□□□□ -0.31
TP53-227ENST00000622645 LMAN1P49257 510 aa13.11□□□□□ -0.31
TP53-227ENST00000622645 ITIH3Q06033 890 aa13.11□□□□□ -0.31
TP53-227ENST00000622645 CCDC70Q6NSX1 233 aa13.11□□□□□ -0.31
TP53-227ENST00000622645 TTLL6Q8N841 843 aa13.11□□□□□ -0.31
TP53-227ENST00000622645 AGBL1Q96MI9 1066 aa13.11□□□□□ -0.31
TP53-227ENST00000622645 PARVGQ9HBI0 331 aa13.11□□□□□ -0.31
TP53-227ENST00000622645 METTL14Q9HCE5 456 aaKnown RBP13.11□□□□□ -0.31
TP53-227ENST00000622645 RBM12Q9NTZ6 932 aaKnown RBP13.11□□□□□ -0.31
TP53-227ENST00000622645 PKD2L1Q9P0L9 805 aa13.11□□□□□ -0.31
TP53-227ENST00000622645 HPCAL4Q9UM19 191 aa13.11□□□□□ -0.31
TP53-227ENST00000622645 CAP2P40123 477 aa13.11□□□□□ -0.31
TP53-227ENST00000622645 BANK1Q8NDB2 785 aa13.11□□□□□ -0.31
TP53-227ENST00000622645 RIN2Q8WYP3 895 aaPredicted RBP13.11□□□□□ -0.31
TP53-227ENST00000622645 EXOC4Q96A65 974 aa13.11□□□□□ -0.31
TP53-227ENST00000622645 FIZ1Q96SL8 496 aa13.11□□□□□ -0.31
TP53-227ENST00000622645 SIX2Q9NPC8 291 aa13.11□□□□□ -0.31
TP53-227ENST00000622645 GCNT4Q9P109 453 aa13.11□□□□□ -0.31
TP53-227ENST00000622645 SHTN1A0MZ66 631 aa13.1□□□□□ -0.31
TP53-227ENST00000622645 CCDC66A2RUB6 948 aa13.1□□□□□ -0.31
TP53-227ENST00000622645 SLC16A3O15427 465 aaKnown RBP13.1□□□□□ -0.31
TP53-227ENST00000622645 RNASE9P60153 205 aaKnown RBP13.1□□□□□ -0.31
TP53-227ENST00000622645 GBP6Q6ZN66 633 aa13.1□□□□□ -0.31
TP53-227ENST00000622645 BORCS6Q96GS4 357 aa13.1□□□□□ -0.31
TP53-227ENST00000622645 GOLPH3Q9H4A6 298 aa13.1□□□□□ -0.31
TP53-227ENST00000622645 VIPAS39Q9H9C1 493 aa13.1□□□□□ -0.31
TP53-227ENST00000622645 PCDHGC5Q9Y5F6 944 aa13.1□□□□□ -0.31
TP53-227ENST00000622645 ZC3H4Q9UPT8 1303 aaKnown RBP13.1□□□□□ -0.31
TP53-227ENST00000622645 IPO5O00410 1097 aaKnown RBP13.1□□□□□ -0.31
TP53-227ENST00000622645 SYF2O95926 243 aaKnown RBP13.1□□□□□ -0.31
TP53-227ENST00000622645 ITGB5P18084 799 aa13.1□□□□□ -0.31
TP53-227ENST00000622645 INPP5BP32019 993 aa13.1□□□□□ -0.31
TP53-227ENST00000622645 ZNF720Q7Z2F6 126 aa13.1□□□□□ -0.31
TP53-227ENST00000622645 FAM71BQ8TC56 605 aa13.1□□□□□ -0.31
TP53-227ENST00000622645 ACBD3Q9H3P7 528 aa13.1□□□□□ -0.31
TP53-227ENST00000622645 PLEKHA4Q9H4M7 779 aa13.1□□□□□ -0.31
TP53-227ENST00000622645 COL4A5P29400 1685 aa13.1□□□□□ -0.31
TP53-227ENST00000622645 GRID2IPA4D2P6 1211 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 PTPROQ16827 1216 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 NBPF9Q3BBW0 867 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 CFAP221Q4G0U5 840 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 ODR4Q5SWX8 454 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 MAEAQ7L5Y9 396 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 FAM178BQ8IXR5 827 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 FAM186BQ8IYM0 893 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 RTKN2Q8IZC4 609 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 KCTD17Q8N5Z5 321 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 NACC1Q96RE7 527 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 LXNQ9BS40 222 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 STK32BQ9NY57 414 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 TSKSQ9UJT2 592 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 NAGPAQ9UK23 515 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 A0A0U1RQG5 324 aaPredicted RBP13.09□□□□□ -0.31
TP53-227ENST00000622645 EIF3DO15371 548 aaKnown RBP eCLIP13.09□□□□□ -0.31
TP53-227ENST00000622645 RXRBP28702 533 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 PSMC2P35998 433 aaKnown RBP13.09□□□□□ -0.31
TP53-227ENST00000622645 CYP2J2P51589 502 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 PLS1Q14651 629 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 MEI1Q5TIA1 1274 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 TAF3Q5VWG9 929 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 ALKBH5Q6P6C2 394 aaKnown RBP13.09□□□□□ -0.31
TP53-227ENST00000622645 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.09□□□□□ -0.31
TP53-227ENST00000622645 FAM160B2Q86V87 743 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 AENQ8WTP8 325 aaKnown RBP13.09□□□□□ -0.31
TP53-227ENST00000622645 WDR11Q9BZH6 1224 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 MED4Q9NPJ6 270 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 COL20A1Q9P218 1284 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 UTRNP46939 3433 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 FRMPD4Q14CM0 1322 aa13.09□□□□□ -0.31
TP53-227ENST00000622645 NFIBO00712 420 aa13.08□□□□□ -0.31
TP53-227ENST00000622645 AARSP49588 968 aaKnown RBP eCLIP13.08□□□□□ -0.31
TP53-227ENST00000622645 HNRNPH2P55795 449 aaKnown RBP13.08□□□□□ -0.31
TP53-227ENST00000622645 DGKZQ13574 1117 aa13.08□□□□□ -0.31
TP53-227ENST00000622645 B3GNT9Q6UX72 402 aa13.08□□□□□ -0.31
TP53-227ENST00000622645 SND1Q7KZF4 910 aaKnown RBP eCLIP13.08□□□□□ -0.31
TP53-227ENST00000622645 TEKT3Q9BXF9 490 aa13.08□□□□□ -0.31
TP53-227ENST00000622645 ZNF341Q9BYN7 854 aa13.08□□□□□ -0.31
TP53-227ENST00000622645 EHMT1Q9H9B1 1298 aa13.08□□□□□ -0.31
TP53-227ENST00000622645 STIM2Q9P246 746 aa13.08□□□□□ -0.31
TP53-227ENST00000622645 FEM1BQ9UK73 627 aa13.08□□□□□ -0.31
TP53-227ENST00000622645 CCPG1Q9ULG6 757 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms