RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 LMBR1Q8WVP7 490 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 CASKIN2Q8WXE0 1202 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 SLC5A5Q92911 643 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 SLC35C1Q96A29 364 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 AKT1S1Q96B36 256 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 CALR3Q96L12 384 aaKnown RBP10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 SPAG5Q96R06 1193 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 UIMC1Q96RL1 719 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 PSMB7Q99436 277 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 HSD17B14Q9BPX1 270 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 RUSC1Q9BVN2 902 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 NAGPAQ9UK23 515 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 RABGAP1Q9Y3P9 1069 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 PCDHAC2Q9Y5I4 1007 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 PSME4Q14997 1843 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 RSPH10B2B2RC85 870 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 ECE2O60344 883 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 PSMD10O75832 226 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 FLOT1O75955 427 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 H2AFZP0C0S5 128 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 RSPH10BP0C881 870 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 PSMC2P35998 433 aaKnown RBP10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 ZNF76P36508 570 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 HSPA9P38646 679 aaKnown RBP10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 STAT1P42224 750 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 CARSP49589 748 aaKnown RBP10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 ZNF131P52739 623 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 CACNB3P54284 484 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 SNAP25P60880 206 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 JAG1P78504 1218 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 ARID5AQ03989 594 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 CFAP58Q5T655 872 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 ALKBH5Q6P6C2 394 aaKnown RBP10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 C1orf186Q6ZWK4 172 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 H2AFVQ71UI9 128 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 VPS36Q86VN1 386 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 COL23A1Q86Y22 540 aaPredicted RBP10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 KIAA0825Q8IV33 1275 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 FLAD1Q8NFF5 587 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 TPCN2Q8NHX9 752 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 SLC30A5Q8TAD4 765 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 OLIG1Q8TAK6 271 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 RBM46Q8TBY0 533 aaKnown RBP10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 ZIM3Q96PE6 472 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 KRT12Q99456 494 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 ISCUQ9H1K1 167 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 BHMT2Q9H2M3 363 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 DBNDD1Q9H9R9 158 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 EPB41L5Q9HCM4 733 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 DMAC2Q9NW81 257 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 SUCLA2Q9P2R7 463 aaPredicted RBP10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 LCMT1Q9UIC8 334 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 AJAP1Q9UKB5 411 aaPredicted RBP10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 PRR12Q9ULL5 1215 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 NCANO14594 1321 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 ZMYM2Q9UBW7 1377 aa10.51□□□□□ -0.73
IGHV3-54-201ENST00000622166 CCDC188H7C350 402 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 DDX3XO00571 662 aaKnown RBP eCLIP10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 RAD51CO43502 376 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 RAD21O60216 631 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 PLA2G6O60733 806 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 SLITRK3O94933 977 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 FAM13AO94988 1023 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 GDF11O95390 407 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 GCNT3O95395 438 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 GH2P01242 217 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 CASP4P49662 377 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 PRELPP51888 382 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 RBM5P52756 815 aaKnown RBP eCLIP10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 MRPS25P82663 173 aaKnown RBP10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 GUCY2DQ02846 1103 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 MYBPC2Q14324 1141 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 RRP1BQ14684 758 aaKnown RBP10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 USH1GQ495M9 461 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 TTMPQ5BVD1 217 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 LRIG3Q6UXM1 1119 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 STXBP4Q6ZWJ1 553 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 OTOP1Q7RTM1 612 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 KRT27Q7Z3Y8 459 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 FMNL3Q8IVF7 1028 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 SYCE1Q8N0S2 351 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 PIK3R5Q8WYR1 880 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 ARL8AQ96BM9 186 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 ZBTB9Q96C00 473 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 DYDC2Q96IM9 177 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 CCDC43Q96MW1 224 aaKnown RBP10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 RUFY1Q96T51 708 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 SYT11Q9BT88 431 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 WDR18Q9BV38 432 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 CAPS2Q9BXY5 557 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 STK33Q9BYT3 514 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 EHMT1Q9H9B1 1298 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 KCND2Q9NZV8 630 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 HERC5Q9UII4 1024 aaKnown RBP10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 ODF2LQ9ULJ1 636 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 TTC7AQ9ULT0 858 aaPredicted RBP10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 NFU1Q9UMS0 254 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 FRMPD4Q14CM0 1322 aa10.5□□□□□ -0.73
IGHV3-54-201ENST00000622166 A0A1W2PRG0 241 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms