RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 RTFDC1Q9BY42 306 aaPredicted RBP10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 TMEM60Q9H2L4 133 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 ADARB2Q9NS39 739 aaKnown RBP10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 CPA4Q9UI42 421 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 PTPN22Q9Y2R2 807 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 PCDHAC2Q9Y5I4 1007 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 FER1L4A9Z1Z3 1794 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 SOWAHDA6NJG2 315 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 ASB14A6NK59 587 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 PLSCR1O15162 318 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 STAMBPO95630 424 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 BPIFB4P59827 614 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 PPP4CP60510 307 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 ZNF746Q6NUN9 644 aaPredicted RBP10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 SCYL3Q8IZE3 742 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 ZDHHC15Q96MV8 337 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 GBA2Q9HCG7 927 aaPredicted RBP10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 RWDD2AQ9UIY3 292 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 DISP2A7MBM2 1401 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 WDR19Q8NEZ3 1342 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 GNAT1P11488 350 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 NT5C2P49902 561 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 ETF1P62495 437 aaKnown RBP10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 GRIK5Q16478 980 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 TICAM2Q86XR7 235 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 FBF1Q8TES7 1133 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 TCP11Q8WWU5 503 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 TAAR1Q96RJ0 339 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 HIP1RO75146 1068 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 CAPN2P17655 700 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 KRT15P19012 456 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 MAPK4P31152 587 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 ADCY8P40145 1251 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 TSGA10IPQ3SY00 556 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 HAUS6Q7Z4H7 955 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 CPLX4Q7Z7G2 160 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 SLC35F6Q8N357 371 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 RYBPQ8N488 228 aaPredicted RBP10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 GPRC5AQ8NFJ5 357 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 HAUS4Q9H6D7 363 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 ZFYVE28Q9HCC9 887 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 TOPORSQ9NS56 1045 aaPredicted RBP10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 FAM184BQ9ULE4 1060 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 ZBTB24O43167 697 aaPredicted RBP10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 FDX1P10109 184 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 SNX1Q13596 522 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 DNAJC24Q6P3W2 148 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 ZFPM1Q8IX07 1006 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 SLC17A8Q8NDX2 589 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 ERO1AQ96HE7 468 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 A6NJR5 290 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 ZMYND10O75800 440 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 FDPSP14324 419 aaKnown RBP10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 SFNP31947 248 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 CASP7P55210 303 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 MRPS25P82663 173 aaKnown RBP10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 PPFIA1Q13136 1202 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 SKIV2LQ15477 1246 aaKnown RBP10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 ERCC6LQ2NKX8 1250 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 PPP1R18Q6NYC8 613 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 FMR1NBQ8N0W7 255 aaPredicted RBP10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 SIX6OS1Q8N1H7 587 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 RSPH14Q9UHP6 348 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 PIN4Q9Y237 131 aaKnown RBP10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 IKBKBO14920 756 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 USP11P51784 963 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 RCAN1P53805 252 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 TMEM270Q6UE05 265 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 GIMAP8Q8ND71 665 aaPredicted RBP10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 SLC38A10Q9HBR0 1119 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 DDX4Q9NQI0 724 aaKnown RBP10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 MAD1L1Q9Y6D9 718 aa10.98□□□□□ -0.65
SMARCA1-205ENST00000617310 CETPP11597 493 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 YWHABP31946 246 aaKnown RBP10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 ACOT2P49753 483 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 ATP2C1P98194 919 aaPredicted RBP10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 TBC1D31Q96DN5 1066 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 VIMP08670 466 aaKnown RBP10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 GRIN1Q05586 938 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 LRRC63Q05C16 580 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 CLUL1Q15846 466 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 KRT71Q3SY84 523 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 SLFN12LQ6IEE8 588 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 IFT20Q8IY31 132 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 SEPT1Q8WYJ6 367 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 NKIRAS1Q9NYS0 192 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 DNAJC12Q9UKB3 198 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 MYOM1P52179 1685 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 MAP1BP46821 2468 aaKnown RBP10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 LRRD1A4D1F6 860 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 STXBP3O00186 592 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 BUB1BO60566 1050 aaPredicted RBP10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 MYL1P05976 194 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 KCNH2Q12809 1159 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 PSMD2Q13200 908 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 EPHA7Q15375 998 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 GLYCTKQ8IVS8 523 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 HYOU1Q9Y4L1 999 aa10.97□□□□□ -0.65
SMARCA1-205ENST00000617310 HDLBPQ00341 1268 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms