RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 ZBBXA8MT70 800 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 ARL4AP40617 200 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 RCAN1P53805 252 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 KCNH2Q12809 1159 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 PLCB4Q15147 1175 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 DLGAP5Q15398 846 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 HNRNPLLQ8WVV9 542 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 RBM41Q96IZ5 413 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 ANAPC7Q9UJX3 599 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 HPCAL4Q9UM19 191 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 NOC2LQ9Y3T9 749 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 GOLGA8CPA6NN73 597 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 STXBP3O00186 592 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 MED7O43513 233 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 DIAPH2O60879 1101 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 ZBED1O96006 694 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 PDE6BP35913 854 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 C16orf87Q6PH81 154 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 NYAP1Q6ZVC0 841 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 SPATA21Q7Z572 469 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 STAG2Q8N3U4 1231 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 MTA3Q9BTC8 594 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 CNOT8Q9UFF9 292 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 TRPC5Q9UL62 973 aaPredicted RBP11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 ZNF804BA4D1E1 1349 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 ABCD1P33897 745 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 DHX34Q14147 1143 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 LRIG3Q6UXM1 1119 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 RGS9BPQ6ZS82 235 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 LCA5Q86VQ0 697 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 DTNBP1Q96EV8 351 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 PIH1D3Q9NQM4 214 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 IVNS1ABPQ9Y6Y0 642 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 RFX7Q2KHR2 1363 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 HNRNPCL1O60812 293 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 LSP1P33241 339 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 HSPA9P38646 679 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 EPHB1P54762 984 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 KRT39Q6A163 491 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 USP17L2Q6R6M4 530 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 TRIM15Q9C019 465 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 FIS1Q9Y3D6 152 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 SYNJ2BP-COX16A0A087WUM0 186 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 AGTP01019 485 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 KLC1Q07866 573 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 SESTD1Q86VW0 696 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 METTL16Q86W50 562 aaKnown RBP11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 MB21D2Q8IYB1 491 aaPredicted RBP11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 ZNF710Q8N1W2 664 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 TTC13Q8NBP0 860 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 BHMT2Q9H2M3 363 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 COX16Q9P0S2 106 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 LIMA1Q9UHB6 759 aaKnown RBP11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 ATP7BP35670 1465 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 EIF4G3O43432 1585 aaKnown RBP11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 CFAP69A5D8W1 941 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 FOXN1O15353 648 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 PRPSAP2O60256 369 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 IFRD2Q12894 506 aaPredicted RBP11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 ZNF211Q13398 564 aaPredicted RBP11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 TEDDM1Q5T9Z0 273 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 GUF1Q8N442 669 aaKnown RBP11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 ICA1LQ8NDH6 482 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 RIN2Q8WYP3 895 aaPredicted RBP11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 FAM149B1Q96BN6 582 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 MLH3Q9UHC1 1453 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 GSTA4O15217 222 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 OCRLQ01968 901 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 SLC7A3Q8WY07 619 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 ANKRD36BP1Q96IX9 119 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 MRPL40Q9NQ50 206 aaKnown RBP11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 AMACRQ9UHK6 382 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 CCPG1Q9ULG6 757 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 HNRNPCP07910 306 aaKnown RBP eCLIP11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 ABCB5Q2M3G0 1257 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 TBC1D10CQ8IV04 446 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 OXER1Q8TDS5 423 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 ATP6V1E2Q96A05 226 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 IRAK4Q9NWZ3 460 aa11.41□□□□□ -0.58
CLTCL1-209ENST00000617103 PLEKHG1Q9ULL1 1385 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 PRAMEF22A3QJZ6 481 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 ENO4A6NNW6 628 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 WDR64B1ANS9 1081 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 TOM1O60784 492 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 PCYT1AP49585 367 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 STAT2P52630 851 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 PFKFB3Q16875 520 aaPredicted RBP11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 CCDC137Q6PK04 289 aaKnown RBP11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 C8orf37Q96NL8 207 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 CHP1Q99653 195 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 KIFC3Q9BVG8 833 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 HEMGNQ9BXL5 484 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 L2HGDHQ9H9P8 463 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 WARS2Q9UGM6 360 aaKnown RBP11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 NOD1Q9Y239 953 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 ABCA5Q8WWZ7 1642 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 ITIH6Q6UXX5 1313 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 S100BP04271 92 aaPredicted RBP11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 CCND1P24385 295 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 HNRNPH1P31943 449 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms