RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 UTYO14607 1347 aa19.05■□□□□ 0.64
ATXN2-227ENST00000616825 PADI6Q6TGC4 694 aa19.05■□□□□ 0.64
ATXN2-227ENST00000616825 PARD6BQ9BYG5 372 aa19.05■□□□□ 0.64
ATXN2-227ENST00000616825 CPVLQ9H3G5 476 aa19.05■□□□□ 0.64
ATXN2-227ENST00000616825 ZNF335Q9H4Z2 1342 aaPredicted RBP19.05■□□□□ 0.64
ATXN2-227ENST00000616825 KIF9Q9HAQ2 790 aa19.05■□□□□ 0.64
ATXN2-227ENST00000616825 LMCD1Q9NZU5 365 aa19.05■□□□□ 0.64
ATXN2-227ENST00000616825 CPSF1Q10570 1443 aaKnown RBP19.04■□□□□ 0.64
ATXN2-227ENST00000616825 TRIP13Q15645 432 aaPredicted RBP19.04■□□□□ 0.64
ATXN2-227ENST00000616825 ENAHQ8N8S7 591 aaPredicted RBP19.04■□□□□ 0.64
ATXN2-227ENST00000616825 PMLP29590 882 aa19.04■□□□□ 0.64
ATXN2-227ENST00000616825 ZNF394Q53GI3 561 aa19.04■□□□□ 0.64
ATXN2-227ENST00000616825 PDCD7Q8N8D1 485 aaKnown RBP19.04■□□□□ 0.64
ATXN2-227ENST00000616825 SLC44A5Q8NCS7 719 aa19.04■□□□□ 0.64
ATXN2-227ENST00000616825 GDAP1Q8TB36 358 aa19.04■□□□□ 0.64
ATXN2-227ENST00000616825 ZNF526Q8TF50 670 aaPredicted RBP19.04■□□□□ 0.64
ATXN2-227ENST00000616825 WRNIP1Q96S55 665 aa19.04■□□□□ 0.64
ATXN2-227ENST00000616825 EFHD1Q9BUP0 239 aa19.04■□□□□ 0.64
ATXN2-227ENST00000616825 ATP6V0A4Q9HBG4 840 aa19.04■□□□□ 0.64
ATXN2-227ENST00000616825 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.04■□□□□ 0.64
ATXN2-227ENST00000616825 PPME1Q9Y570 386 aa19.04■□□□□ 0.64
ATXN2-227ENST00000616825 SFR1Q86XK3 245 aa19.04■□□□□ 0.64
ATXN2-227ENST00000616825 PSPC1Q8WXF1 523 aaKnown RBP19.04■□□□□ 0.64
ATXN2-227ENST00000616825 ALX1Q15699 326 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 PPP6R3Q5H9R7 873 aaPredicted RBP19.03■□□□□ 0.64
ATXN2-227ENST00000616825 WDR19Q8NEZ3 1342 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 FGGP02679 453 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 GNAT1P11488 350 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 PSMA2P25787 234 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 CASP2P42575 452 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 PRELPP51888 382 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 SPP2Q13103 211 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 TOB2Q14106 344 aaPredicted RBP19.03■□□□□ 0.64
ATXN2-227ENST00000616825 CEP95Q96GE4 821 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 FGD4Q96M96 766 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 LGALS16A8MUM7 142 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 F5H6K3 240 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 NR3C1P04150 777 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 NFKBIAP25963 317 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 KLRC3Q07444 240 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 ALS2CLQ60I27 953 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 EMBQ6PCB8 327 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 SPDL1Q96EA4 605 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 RNF146Q9NTX7 359 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 CDHR2Q9BYE9 1310 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 USP17L10C9JJH3 530 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 F8W8V4 182 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 CLGNO14967 610 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 SMIM24O75264 130 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 RASIP1Q5U651 963 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 AP1M1Q9BXS5 423 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 CNOT8Q9UFF9 292 aaKnown RBP19.03■□□□□ 0.64
ATXN2-227ENST00000616825 FEM1BQ9UK73 627 aa19.03■□□□□ 0.64
ATXN2-227ENST00000616825 NOVA2Q9UNW9 492 aaKnown RBP19.03■□□□□ 0.64
ATXN2-227ENST00000616825 PODXLO00592 558 aa19.02■□□□□ 0.64
ATXN2-227ENST00000616825 NNTQ13423 1086 aa19.02■□□□□ 0.64
ATXN2-227ENST00000616825 CDO1Q16878 200 aa19.02■□□□□ 0.64
ATXN2-227ENST00000616825 SNRNP48Q6IEG0 339 aaKnown RBP19.02■□□□□ 0.64
ATXN2-227ENST00000616825 SYNE4Q8N205 404 aa19.02■□□□□ 0.64
ATXN2-227ENST00000616825 PRPF38AQ8NAV1 312 aaKnown RBP19.02■□□□□ 0.64
ATXN2-227ENST00000616825 ANAPC7Q9UJX3 599 aa19.02■□□□□ 0.64
ATXN2-227ENST00000616825 NCAPD2Q15021 1401 aa19.02■□□□□ 0.64
ATXN2-227ENST00000616825 VGLL3A8MV65 326 aa19.02■□□□□ 0.64
ATXN2-227ENST00000616825 TJP3O95049 919 aa19.02■□□□□ 0.64
ATXN2-227ENST00000616825 GPSM2P81274 684 aa19.02■□□□□ 0.64
ATXN2-227ENST00000616825 TOM1L1O75674 476 aa19.02■□□□□ 0.63
ATXN2-227ENST00000616825 CIITAP33076 1130 aa19.02■□□□□ 0.63
ATXN2-227ENST00000616825 PHKA2P46019 1235 aa19.02■□□□□ 0.63
ATXN2-227ENST00000616825 GCLMP48507 274 aa19.02■□□□□ 0.63
ATXN2-227ENST00000616825 CUL1Q13616 776 aa19.02■□□□□ 0.63
ATXN2-227ENST00000616825 DDX27Q96GQ7 796 aaKnown RBP19.02■□□□□ 0.63
ATXN2-227ENST00000616825 SLITRK6Q9H5Y7 841 aa19.02■□□□□ 0.63
ATXN2-227ENST00000616825 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.02■□□□□ 0.632e-7■■■□□ 16.3
ATXN2-227ENST00000616825 FAM196BA6NMK8 535 aa19.01■□□□□ 0.63
ATXN2-227ENST00000616825 KRT37O76014 449 aa19.01■□□□□ 0.63
ATXN2-227ENST00000616825 ORC2Q13416 577 aaPredicted RBP19.01■□□□□ 0.63
ATXN2-227ENST00000616825 SLFNL1Q499Z3 407 aa19.01■□□□□ 0.63
ATXN2-227ENST00000616825 C2orf69Q8N8R5 385 aa19.01■□□□□ 0.63
ATXN2-227ENST00000616825 RAVER2Q9HCJ3 691 aaKnown RBP19.01■□□□□ 0.63
ATXN2-227ENST00000616825 PPARGP37231 505 aaPredicted RBP19.01■□□□□ 0.63
ATXN2-227ENST00000616825 PPP1R18Q6NYC8 613 aa19.01■□□□□ 0.63
ATXN2-227ENST00000616825 ZMYND12Q9H0C1 365 aa19.01■□□□□ 0.63
ATXN2-227ENST00000616825 BNIP3LO60238 219 aa19.01■□□□□ 0.63
ATXN2-227ENST00000616825 MYCP01106 439 aaPredicted RBP19.01■□□□□ 0.63
ATXN2-227ENST00000616825 SLC12A1Q13621 1099 aa19.01■□□□□ 0.63
ATXN2-227ENST00000616825 SEL1LQ9UBV2 794 aa19.01■□□□□ 0.63
ATXN2-227ENST00000616825 PTCH1Q13635 1447 aa19.01■□□□□ 0.63
ATXN2-227ENST00000616825 QARSP47897 775 aaKnown RBP19.01■□□□□ 0.63
ATXN2-227ENST00000616825 TNFAIP2Q03169 654 aa19.01■□□□□ 0.63
ATXN2-227ENST00000616825 TTC13Q8NBP0 860 aa19.01■□□□□ 0.63
ATXN2-227ENST00000616825 RBM41Q96IZ5 413 aaKnown RBP19.01■□□□□ 0.63
ATXN2-227ENST00000616825 GCNAQ96QF7 691 aa19.01■□□□□ 0.63
ATXN2-227ENST00000616825 FAM8A1Q9UBU6 413 aa19.01■□□□□ 0.63
ATXN2-227ENST00000616825 TTI1O43156 1089 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 PPFIA2O75334 1257 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 HSPA8P11142 646 aaKnown RBP19■□□□□ 0.63
ATXN2-227ENST00000616825 C6orf118Q5T5N4 469 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 TWF2Q6IBS0 349 aaKnown RBP19■□□□□ 0.63
ATXN2-227ENST00000616825 ELMSAN1Q6PJG2 1045 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 DHX38Q92620 1227 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms