RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 FRMD3A2A2Y4 597 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 TESPA1A2RU30 521 aaPredicted RBP7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 RSPH10B2B2RC85 870 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 RPSAP08865 295 aaKnown RBP7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 RSPH10BP0C881 870 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 LSP1P33241 339 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 ADCY8P40145 1251 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 CORO7P57737 925 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 ACTN3Q08043 901 aaPredicted RBP7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 CUL1Q13616 776 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 NAB2Q15742 525 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 MEA1Q16626 185 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 XKR9Q5GH70 373 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 PPP4R3CPQ6ZMV5 832 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 NLRP14Q86W24 1093 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 FMNL3Q8IVF7 1028 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 TSEN2Q8NCE0 465 aaKnown RBP7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 DAGLBQ8NCG7 672 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 KIFAP3Q92845 792 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 ZNF653Q96CK0 615 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 DYDC2Q96IM9 177 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 EDEM3Q9BZQ6 932 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 SYNCQ9H7C4 482 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 TDRD3Q9H7E2 651 aaKnown RBP7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 EFCC1Q9HA90 598 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 PI4KBQ9UBF8 816 aa7.45□□□□□ -1.22
SYNPO2-206ENST00000610556 TNS2Q63HR2 1409 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 ABCA3Q99758 1704 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 ACSL3O95573 720 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 SYF2O95926 243 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 TNNI1P19237 187 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 FXR2P51116 673 aaKnown RBP eCLIP7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 GALCP54803 685 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 SEMA3FQ13275 785 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 HIBCHQ6NVY1 386 aaPredicted RBP7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 MIGA2Q7L4E1 593 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 TAOK1Q7L7X3 1001 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 TBC1D16Q8TBP0 767 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 NEK9Q8TD19 979 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 CASKIN2Q8WXE0 1202 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 CCT8L2Q96SF2 557 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 STX2P32856 288 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 CASP4P49662 377 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 CCDC38Q502W7 563 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 WDR44Q5JSH3 913 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 MIIPQ5JXC2 388 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 C10orf76Q5T2E6 689 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 KLHDC7AQ5VTJ3 777 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 PPP4R3AQ6IN85 833 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 PRR5LQ6MZQ0 368 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 CYP4F22Q6NT55 531 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 C4orf32Q8N8J7 132 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 BANK1Q8NDB2 785 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 ZNF384Q8TF68 577 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 ELAC2Q9BQ52 826 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 TEKT3Q9BXF9 490 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 PLCB1Q9NQ66 1216 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 ATRNO75882 1429 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 GPR75-ASB3A0A0A6YYF3 556 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 CCDC188H7C350 402 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 PPIP5K2O43314 1243 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 TRIM37O94972 964 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 KRT15P19012 456 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 CYP11B2P19099 503 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 CRKP46108 304 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 CLNS1AP54105 237 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 PPP4CP60510 307 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 ZBTB16Q05516 673 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 FIGNQ5HY92 759 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 KAZNQ674X7 775 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 PTF1AQ7RTS3 328 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 VSIG1Q86XK7 387 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 SPATS2Q86XZ4 545 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 CCDC197Q8NCU1 140 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 CHURC1Q8WUH1 139 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 EIF2AK1Q9BQI3 630 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 IMPG2Q9BZV3 1241 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 COA1Q9GZY4 146 aa7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 TYW1Q9NV66 732 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-206ENST00000610556 ALS2Q96Q42 1657 aa7.43□□□□□ -1.22
SYNPO2-206ENST00000610556 GMNCA6NCL1 334 aa7.43□□□□□ -1.22
SYNPO2-206ENST00000610556 MYO1FO00160 1098 aa7.43□□□□□ -1.22
SYNPO2-206ENST00000610556 ZNF263O14978 683 aa7.43□□□□□ -1.22
SYNPO2-206ENST00000610556 THAP12O43422 761 aa7.43□□□□□ -1.22
SYNPO2-206ENST00000610556 EVI5O60447 810 aa7.43□□□□□ -1.22
SYNPO2-206ENST00000610556 MED24O75448 989 aa7.43□□□□□ -1.22
SYNPO2-206ENST00000610556 GAS8O95995 478 aa7.43□□□□□ -1.22
SYNPO2-206ENST00000610556 GAP43P17677 238 aa7.43□□□□□ -1.22
SYNPO2-206ENST00000610556 MDH1P40925 334 aaKnown RBP7.43□□□□□ -1.22
SYNPO2-206ENST00000610556 INTS8Q75QN2 995 aaKnown RBP7.43□□□□□ -1.22
SYNPO2-206ENST00000610556 CATSPER3Q86XQ3 398 aa7.43□□□□□ -1.22
SYNPO2-206ENST00000610556 METTL13Q8N6R0 699 aa7.43□□□□□ -1.22
SYNPO2-206ENST00000610556 USP38Q8NB14 1042 aa7.43□□□□□ -1.22
SYNPO2-206ENST00000610556 THOC1Q96FV9 657 aaKnown RBP7.43□□□□□ -1.22
SYNPO2-206ENST00000610556 NACC1Q96RE7 527 aa7.43□□□□□ -1.22
SYNPO2-206ENST00000610556 RTFDC1Q9BY42 306 aaPredicted RBP7.43□□□□□ -1.22
SYNPO2-206ENST00000610556 HOMER3Q9NSC5 361 aa7.43□□□□□ -1.22
SYNPO2-206ENST00000610556 STK24Q9Y6E0 443 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms