RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 CTAGE6Q86UF2 777 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 CTAGE4Q8IX94 777 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 CPXCR1Q8N123 301 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 RNF10Q8N5U6 811 aaKnown RBP13.13□□□□□ -0.31
USP6NL-206ENST00000609853 SLC17A8Q8NDX2 589 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 RDM1Q8NG50 284 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 SECISBP2LQ93073 1101 aaKnown RBP13.13□□□□□ -0.31
USP6NL-206ENST00000609853 TRERF1Q96PN7 1200 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 TCEAL9Q9UHQ7 104 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 DICER1Q9UPY3 1922 aaKnown RBP13.12□□□□□ -0.31
USP6NL-206ENST00000609853 PTPRAP18433 802 aa13.12□□□□□ -0.31
USP6NL-206ENST00000609853 QARSP47897 775 aaKnown RBP13.12□□□□□ -0.31
USP6NL-206ENST00000609853 JAK3P52333 1124 aa13.12□□□□□ -0.31
USP6NL-206ENST00000609853 POLR2FP61218 127 aaKnown RBP13.12□□□□□ -0.31
USP6NL-206ENST00000609853 RPS6P62753 249 aaKnown RBP13.12□□□□□ -0.31
USP6NL-206ENST00000609853 SPP2Q13103 211 aa13.12□□□□□ -0.31
USP6NL-206ENST00000609853 TEX35Q5T0J7 233 aa13.12□□□□□ -0.31
USP6NL-206ENST00000609853 C10orf76Q5T2E6 689 aa13.12□□□□□ -0.31
USP6NL-206ENST00000609853 HGSNATQ68CP4 663 aa13.12□□□□□ -0.31
USP6NL-206ENST00000609853 RNF207Q6ZRF8 634 aa13.12□□□□□ -0.31
USP6NL-206ENST00000609853 SLC9A9Q8IVB4 645 aa13.12□□□□□ -0.31
USP6NL-206ENST00000609853 FMNL3Q8IVF7 1028 aa13.12□□□□□ -0.31
USP6NL-206ENST00000609853 LACRTQ9GZZ8 138 aa13.12□□□□□ -0.31
USP6NL-206ENST00000609853 LARSQ9P2J5 1176 aaKnown RBP13.12□□□□□ -0.31
USP6NL-206ENST00000609853 JRKLQ9Y4A0 524 aa13.12□□□□□ -0.31
USP6NL-206ENST00000609853 SAR1BQ9Y6B6 198 aa13.12□□□□□ -0.31
USP6NL-206ENST00000609853 ATP2A1O14983 1001 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 TGFB1I1O43294 461 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 AKAP3O75969 853 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 PRLRP16471 622 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 MAGEA1P43355 309 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 CLCN6P51797 869 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 SNRPFP62306 86 aaKnown RBP13.11□□□□□ -0.31
USP6NL-206ENST00000609853 MRPS9P82933 396 aaKnown RBP13.11□□□□□ -0.31
USP6NL-206ENST00000609853 KRT76Q01546 638 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 CKAP4Q07065 602 aaKnown RBP13.11□□□□□ -0.31
USP6NL-206ENST00000609853 BRD3Q15059 726 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 PGM5Q15124 567 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 EXOC3L4Q17RC7 722 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 MUM1L1Q5H9M0 696 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 ODR4Q5SWX8 454 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 GBP6Q6ZN66 633 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 CCDC155Q8N6L0 562 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 ALS2CR12Q96Q35 445 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 FIZ1Q96SL8 496 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 RMDN3Q96TC7 470 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 GBP3Q9H0R5 595 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 GANQ9H2C0 597 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 PXMP2Q9NR77 195 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 ADAMTS5Q9UNA0 930 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 PHIPQ8WWQ0 1821 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 RLFQ13129 1914 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 MYPNQ86TC9 1320 aa13.11□□□□□ -0.31
USP6NL-206ENST00000609853 ZNF263O14978 683 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 PLEKP08567 350 aaPredicted RBP13.1□□□□□ -0.31
USP6NL-206ENST00000609853 CYP27A1Q02318 531 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 PPP2R5AQ15172 486 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 SUPT20HL1Q3ZLR7 823 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 NOL9Q5SY16 702 aaKnown RBP13.1□□□□□ -0.31
USP6NL-206ENST00000609853 PADI6Q6TGC4 694 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 C4orf19Q8IY42 314 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 BANK1Q8NDB2 785 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 IL31RAQ8NI17 732 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 GPRASP2Q96D09 838 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 BORCS6Q96GS4 357 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 WRNIP1Q96S55 665 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 IWS1Q96ST2 819 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 PDCD2LQ9BRP1 358 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 STRA6Q9BX79 667 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 TMEM206Q9H813 350 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 DMAC2Q9NW81 257 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 WRAP73Q9P2S5 460 aaPredicted RBP13.1□□□□□ -0.31
USP6NL-206ENST00000609853 TRIM10Q9UDY6 481 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 FRMD4BQ9Y2L6 1034 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 ATP8B3O60423 1300 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 ZMYM2Q9UBW7 1377 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 CCDC151A5D8V7 595 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 RCCD1A6NED2 376 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 WDR64B1ANS9 1081 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 DKC1O60832 514 aaKnown RBP eCLIP13.1□□□□□ -0.31
USP6NL-206ENST00000609853 PPP1R37O75864 691 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 STAM2O75886 525 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 ERCC3P19447 782 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 CCND2P30279 289 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 NMT1P30419 496 aaKnown RBP13.1□□□□□ -0.31
USP6NL-206ENST00000609853 DSG3P32926 999 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 RASSF7Q02833 373 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 ITGB3BPQ13352 177 aaPredicted RBP13.1□□□□□ -0.31
USP6NL-206ENST00000609853 COG2Q14746 738 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 ASIC2Q16515 512 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 TDRD12Q587J7 1177 aaKnown RBP13.1□□□□□ -0.31
USP6NL-206ENST00000609853 ANGEL2Q5VTE6 544 aaKnown RBP13.1□□□□□ -0.31
USP6NL-206ENST00000609853 KLHDC7AQ5VTJ3 777 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 ARHGEF16Q5VV41 709 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 IQCEQ6IPM2 695 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 NLRX1Q86UT6 975 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 FAM186BQ8IYM0 893 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 GPC2Q8N158 579 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 MSANTD4Q8NCY6 345 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 SLC35C1Q96A29 364 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms