RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 NKX1-1Q15270 411 aaPredicted RBP15.38■□□□□ 0.05
PCDHB16-201ENST00000609684 EXOC4Q96A65 974 aa15.38■□□□□ 0.05
PCDHB16-201ENST00000609684 SUN1O94901 812 aa15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 FDPSP14324 419 aaKnown RBP15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 RWDD2BP57060 319 aa15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 SLC27A3Q5K4L6 730 aa15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 ALS2CLQ60I27 953 aa15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 SLFN12LQ6IEE8 588 aa15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 CCDC197Q8NCU1 140 aa15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 FAM193BQ96PV7 902 aaPredicted RBP15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 TBC1D22BQ9NU19 505 aa15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 PIM2Q9P1W9 311 aa15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 NOL3O60936 208 aaKnown RBP15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 OR6B2Q6IFH4 312 aa15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 SNX25Q9H3E2 840 aa15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 CCDC188H7C350 402 aa15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 SLC16A4O15374 487 aa15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 IREB2P48200 963 aaKnown RBP15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 BASP1P80723 227 aaKnown RBP15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 SLMAPQ14BN4 828 aa15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 TMED2Q15363 201 aa15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 MCPH1Q8NEM0 835 aa15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 DDX23Q9BUQ8 820 aaKnown RBP15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 NOVA2Q9UNW9 492 aaKnown RBP15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 THNSL1Q8IYQ7 743 aa15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 TBC1D16Q8TBP0 767 aa15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 RAB3IPQ96QF0 476 aaPredicted RBP15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 DAGLAQ9Y4D2 1042 aa15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 ZHX2Q9Y6X8 837 aa15.37■□□□□ 0.05
PCDHB16-201ENST00000609684 IQGAP1P46940 1657 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 ARHGAP42A6NI28 874 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 CTDNEP1O95476 244 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 CLTAP09496 248 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 PDE1BQ01064 536 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 SNRNP48Q6IEG0 339 aaKnown RBP15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 ATP6V0A4Q9HBG4 840 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 TBK1Q9UHD2 729 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 DMTNQ08495 405 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 MTF1Q14872 753 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 SBK1Q52WX2 424 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 ARMC9Q7Z3E5 817 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 IFT122Q9HBG6 1241 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 NR1D1P20393 614 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 FMR1Q06787 632 aaKnown RBP eCLIP15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 CUL1Q13616 776 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 KCNB1Q14721 858 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 SURF1Q15526 300 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 SCYL1Q96KG9 808 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 WRNIP1Q96S55 665 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 AP5M1Q9H0R1 490 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 RPF1Q9H9Y2 349 aaKnown RBP15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 RNF146Q9NTX7 359 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 TXNDC9O14530 226 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 NTSR2O95665 410 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 USP11P51784 963 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 KRT76Q01546 638 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 CCDC38Q502W7 563 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 GJD4Q96KN9 370 aaPredicted RBP15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 TRIM9Q9C026 710 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 FLT1P17948 1338 aa15.36■□□□□ 0.05
PCDHB16-201ENST00000609684 A0A1W2PQC6 194 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 IPO5O00410 1097 aaKnown RBP15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 RASGRF2O14827 1237 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 NAALADL2Q58DX5 795 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 NXNQ6DKJ4 435 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 CC2D1AQ6P1N0 951 aaPredicted RBP15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 KCTD6Q8NC69 237 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 CCNYQ8ND76 341 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 CCSER1Q9C0I3 900 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 EFCC1Q9HA90 598 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 MTMR4Q9NYA4 1195 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 KIAA1210Q9ULL0 1709 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 ANKRD40Q6AI12 368 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 USP49Q70CQ1 688 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 ZMYND12Q9H0C1 365 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 KCNF1Q9H3M0 494 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 SLC38A10Q9HBR0 1119 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 DNAJC17Q9NVM6 304 aaKnown RBP15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 CNOT8Q9UFF9 292 aaKnown RBP15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 NRXN1Q9ULB1 1477 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 HIP1RO75146 1068 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 P4HBP07237 508 aaKnown RBP15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 ACTN1P12814 892 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 SPP2Q13103 211 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 ZNF394Q53GI3 561 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 DARS2Q6PI48 645 aaKnown RBP15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 MARCH10Q8NA82 808 aaPredicted RBP15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 HPS3Q969F9 1004 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 LXNQ9BS40 222 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 HDAC6Q9UBN7 1215 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 ANAPC7Q9UJX3 599 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 TACC3Q9Y6A5 838 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 LDHAP00338 332 aaKnown RBP15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 QARSP47897 775 aaKnown RBP15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 MYO1EQ12965 1108 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 STXBP2Q15833 593 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 NFRKBQ6P4R8 1299 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 CLEC10AQ8IUN9 316 aa15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 HEXIM2Q96MH2 286 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms