RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 CBFA2T2O43439 604 aa11.81□□□□□ -0.52
LINC01001-203ENST00000607448 DEXIO95424 95 aa11.81□□□□□ -0.52
LINC01001-203ENST00000607448 ARP10275 920 aa11.81□□□□□ -0.52
LINC01001-203ENST00000607448 SKILP12757 684 aa11.81□□□□□ -0.52
LINC01001-203ENST00000607448 DNAJB2P25686 324 aa11.81□□□□□ -0.52
LINC01001-203ENST00000607448 HOXC8P31273 242 aa11.81□□□□□ -0.52
LINC01001-203ENST00000607448 TCTN1Q2MV58 587 aa11.81□□□□□ -0.52
LINC01001-203ENST00000607448 TRIM71Q2Q1W2 868 aaKnown RBP11.81□□□□□ -0.52
LINC01001-203ENST00000607448 UTP14CQ5TAP6 766 aaKnown RBP11.81□□□□□ -0.52
LINC01001-203ENST00000607448 TRAF7Q6Q0C0 670 aa11.81□□□□□ -0.52
LINC01001-203ENST00000607448 CRYGNQ8WXF5 182 aa11.81□□□□□ -0.52
LINC01001-203ENST00000607448 UIMC1Q96RL1 719 aa11.81□□□□□ -0.52
LINC01001-203ENST00000607448 MXRA8Q9BRK3 442 aa11.81□□□□□ -0.52
LINC01001-203ENST00000607448 RNF26Q9BY78 433 aaPredicted RBP11.81□□□□□ -0.52
LINC01001-203ENST00000607448 PBX4Q9BYU1 374 aa11.81□□□□□ -0.52
LINC01001-203ENST00000607448 ZMYND12Q9H0C1 365 aa11.81□□□□□ -0.52
LINC01001-203ENST00000607448 RNPEPQ9H4A4 650 aa11.81□□□□□ -0.52
LINC01001-203ENST00000607448 KCNH7Q9NS40 1196 aa11.81□□□□□ -0.52
LINC01001-203ENST00000607448 CEP131Q9UPN4 1083 aa11.81□□□□□ -0.52
LINC01001-203ENST00000607448 XIRP2A4UGR9 3374 aa11.81□□□□□ -0.52
LINC01001-203ENST00000607448 MYH9P35579 1960 aaKnown RBP11.81□□□□□ -0.52
LINC01001-203ENST00000607448 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.8□□□□□ -0.52
LINC01001-203ENST00000607448 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.8□□□□□ -0.52
LINC01001-203ENST00000607448 FAM86B1E9PN63 330 aa11.8□□□□□ -0.52
LINC01001-203ENST00000607448 TREHO43280 583 aa11.8□□□□□ -0.52
LINC01001-203ENST00000607448 MMP1P03956 469 aa11.8□□□□□ -0.52
LINC01001-203ENST00000607448 FAM86B2P0C5J1 330 aa11.8□□□□□ -0.52
LINC01001-203ENST00000607448 SMIM10L2AP0DMW4 78 aa11.8□□□□□ -0.52
LINC01001-203ENST00000607448 SMIM10L2BP0DMW5 78 aa11.8□□□□□ -0.52
LINC01001-203ENST00000607448 CKBP12277 381 aa11.8□□□□□ -0.52
LINC01001-203ENST00000607448 TCF7P36402 384 aaPredicted RBP11.8□□□□□ -0.52
LINC01001-203ENST00000607448 SREBF1P36956 1147 aa11.8□□□□□ -0.52
LINC01001-203ENST00000607448 CCZ1BP86790 482 aa11.8□□□□□ -0.52
LINC01001-203ENST00000607448 CCZ1P86791 482 aaPredicted RBP11.8□□□□□ -0.52
LINC01001-203ENST00000607448 ITGB3BPQ13352 177 aaPredicted RBP11.8□□□□□ -0.52
LINC01001-203ENST00000607448 RILPL1Q5EBL4 403 aa11.8□□□□□ -0.52
LINC01001-203ENST00000607448 ZNF697Q5TEC3 545 aa11.8□□□□□ -0.52
LINC01001-203ENST00000607448 SHC4Q6S5L8 630 aa11.8□□□□□ -0.52
LINC01001-203ENST00000607448 NOSTRINQ8IVI9 506 aa11.8□□□□□ -0.52
LINC01001-203ENST00000607448 KRI1Q8N9T8 703 aaKnown RBP11.8□□□□□ -0.52
LINC01001-203ENST00000607448 AIFM3Q96NN9 605 aa11.8□□□□□ -0.52
LINC01001-203ENST00000607448 OSBPL7Q9BZF2 842 aa11.8□□□□□ -0.52
LINC01001-203ENST00000607448 SEMA6BQ9H3T3 888 aa11.8□□□□□ -0.52
LINC01001-203ENST00000607448 GJB4Q9NTQ9 266 aa11.8□□□□□ -0.52
LINC01001-203ENST00000607448 ESYT2A0FGR8 921 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 CCP110O43303 1012 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 EDIL3O43854 480 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 NBNO60934 754 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 MARCKSP29966 332 aaPredicted RBP11.79□□□□□ -0.52
LINC01001-203ENST00000607448 RBL2Q08999 1139 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 AP3B2Q13367 1082 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 BFSP2Q13515 415 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 MBTPS1Q14703 1052 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 ZNF618Q5T7W0 954 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 LRRC8DQ7L1W4 858 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 ZNF579Q8NAF0 562 aaKnown RBP11.79□□□□□ -0.52
LINC01001-203ENST00000607448 CCDC112Q8NEF3 446 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 CAGE1Q8TC20 777 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 ANKRD7Q92527 254 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 C16orf45Q96MC5 204 aaPredicted RBP11.79□□□□□ -0.52
LINC01001-203ENST00000607448 PCYT2Q99447 389 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 CCDC94Q9BW85 323 aaPredicted RBP11.79□□□□□ -0.52
LINC01001-203ENST00000607448 SETD4Q9NVD3 440 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 TRANK1O15050 2925 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 IGLV3-22A0A075B6J6 115 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 C17orf102A2RUQ5 167 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 ZBBXA8MT70 800 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 SMC2O95347 1197 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 FOSP01100 380 aaPredicted RBP11.79□□□□□ -0.52
LINC01001-203ENST00000607448 MYOGP15173 224 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 SELPP16109 830 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 XBP1P17861 261 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 MARK3P27448 753 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 RABGGTBP53611 331 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 ARHGAP4P98171 946 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 MYL5Q02045 173 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 PTK7Q13308 1070 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 NCAPHQ15003 741 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 PTPN14Q15678 1187 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 CEP55Q53EZ4 464 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 CEP135Q66GS9 1140 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 KANK3Q6NY19 840 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 KRBA2Q6ZNG9 492 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 NYAP1Q6ZVC0 841 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 FILIP1Q7Z7B0 1213 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 SERINC5Q86VE9 423 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 RPUSD2Q8IZ73 545 aaKnown RBP11.79□□□□□ -0.52
LINC01001-203ENST00000607448 ZNF710Q8N1W2 664 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 RETREG2Q8NC44 543 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 AFAP1L1Q8TED9 768 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 ZBTB10Q96DT7 871 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 CDHR1Q96JP9 859 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 CDX2Q99626 313 aaPredicted RBP11.79□□□□□ -0.52
LINC01001-203ENST00000607448 EHMT1Q9H9B1 1298 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 AGO4Q9HCK5 861 aaKnown RBP11.79□□□□□ -0.52
LINC01001-203ENST00000607448 IFNKQ9P0W0 207 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 DACH1Q9UI36 760 aa11.79□□□□□ -0.52
LINC01001-203ENST00000607448 YBX2Q9Y2T7 364 aaKnown RBP11.79□□□□□ -0.52
LINC01001-203ENST00000607448 EVPLQ92817 2033 aa11.78□□□□□ -0.52
LINC01001-203ENST00000607448 COL4A4P53420 1690 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms