RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 PRKCEQ02156 737 aa21.61■■□□□ 1.05
SRSF4-206ENST00000605204 MGAT3Q09327 533 aa21.61■■□□□ 1.05
SRSF4-206ENST00000605204 PRDM12Q9H4Q4 367 aa21.61■■□□□ 1.05
SRSF4-206ENST00000605204 YBX2Q9Y2T7 364 aaKnown RBP21.61■■□□□ 1.05
SRSF4-206ENST00000605204 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.61■■□□□ 1.05
SRSF4-206ENST00000605204 KDM3AQ9Y4C1 1321 aa21.61■■□□□ 1.05
SRSF4-206ENST00000605204 TRANK1O15050 2925 aa21.61■■□□□ 1.05
SRSF4-206ENST00000605204 ADGRE1Q14246 886 aa21.61■■□□□ 1.05
SRSF4-206ENST00000605204 CALCRLQ16602 461 aa21.61■■□□□ 1.05
SRSF4-206ENST00000605204 XKR3Q5GH77 459 aa21.61■■□□□ 1.05
SRSF4-206ENST00000605204 POTEDQ86YR6 584 aa21.61■■□□□ 1.05
SRSF4-206ENST00000605204 DBF4BQ8NFT6 615 aa21.61■■□□□ 1.05
SRSF4-206ENST00000605204 HAS1Q92839 578 aa21.61■■□□□ 1.05
SRSF4-206ENST00000605204 IFIH1Q9BYX4 1025 aaKnown RBP21.61■■□□□ 1.05
SRSF4-206ENST00000605204 FAM49AQ9H0Q0 323 aaPredicted RBP21.61■■□□□ 1.05
SRSF4-206ENST00000605204 FAM205CA6NFA0 338 aa21.6■■□□□ 1.05
SRSF4-206ENST00000605204 ZBTB42B2RXF5 422 aa21.6■■□□□ 1.05
SRSF4-206ENST00000605204 ZNF862O60290 1169 aa21.6■■□□□ 1.05
SRSF4-206ENST00000605204 C22orf31O95567 290 aa21.6■■□□□ 1.05
SRSF4-206ENST00000605204 CHRNA1P02708 482 aa21.6■■□□□ 1.05
SRSF4-206ENST00000605204 TMOD1P28289 359 aa21.6■■□□□ 1.05
SRSF4-206ENST00000605204 PSMC5P62195 406 aa21.6■■□□□ 1.05
SRSF4-206ENST00000605204 GUCY1B3Q02153 619 aa21.6■■□□□ 1.05
SRSF4-206ENST00000605204 NOSTRINQ8IVI9 506 aa21.6■■□□□ 1.05
SRSF4-206ENST00000605204 HERC6Q8IVU3 1022 aa21.6■■□□□ 1.05
SRSF4-206ENST00000605204 TRAPPC12Q8WVT3 735 aa21.6■■□□□ 1.05
SRSF4-206ENST00000605204 GJA10Q969M2 543 aa21.6■■□□□ 1.05
SRSF4-206ENST00000605204 NOL7Q9UMY1 257 aaKnown RBP21.6■■□□□ 1.05
SRSF4-206ENST00000605204 PPME1Q9Y570 386 aa21.6■■□□□ 1.05
SRSF4-206ENST00000605204 TRPV2Q9Y5S1 764 aa21.6■■□□□ 1.05
SRSF4-206ENST00000605204 CDY2AQ9Y6F7 541 aa21.6■■□□□ 1.05
SRSF4-206ENST00000605204 AMHP03971 560 aa21.59■■□□□ 1.05
SRSF4-206ENST00000605204 TSHZ1Q6ZSZ6 1077 aa21.59■■□□□ 1.05
SRSF4-206ENST00000605204 NEK9Q8TD19 979 aa21.59■■□□□ 1.05
SRSF4-206ENST00000605204 NKX2-4Q9H2Z4 354 aa21.59■■□□□ 1.05
SRSF4-206ENST00000605204 SLC28A3Q9HAS3 691 aa21.59■■□□□ 1.05
SRSF4-206ENST00000605204 PCDHA12Q9UN75 941 aa21.59■■□□□ 1.05
SRSF4-206ENST00000605204 CD2BP2O95400 341 aaKnown RBP21.58■■□□□ 1.04
SRSF4-206ENST00000605204 P4HBP07237 508 aaKnown RBP21.58■■□□□ 1.04
SRSF4-206ENST00000605204 QARSP47897 775 aaKnown RBP21.58■■□□□ 1.04
SRSF4-206ENST00000605204 MKRN4PQ13434 485 aaPredicted RBP21.58■■□□□ 1.04
SRSF4-206ENST00000605204 EPHA7Q15375 998 aa21.58■■□□□ 1.04
SRSF4-206ENST00000605204 FBXO47Q5MNV8 452 aa21.58■■□□□ 1.04
SRSF4-206ENST00000605204 ODR4Q5SWX8 454 aa21.58■■□□□ 1.04
SRSF4-206ENST00000605204 JPH2Q9BR39 696 aaPredicted RBP21.58■■□□□ 1.04
SRSF4-206ENST00000605204 NIFKQ9BYG3 293 aaKnown RBP21.58■■□□□ 1.04
SRSF4-206ENST00000605204 PTPRSQ13332 1948 aa21.58■■□□□ 1.04
SRSF4-206ENST00000605204 GHRP10912 638 aa21.57■■□□□ 1.04
SRSF4-206ENST00000605204 U2AF2P26368 475 aaKnown RBP eCLIP21.57■■□□□ 1.045e-12■■■□□ 15.3
SRSF4-206ENST00000605204 TBC1D8BQ0IIM8 1120 aa21.57■■□□□ 1.04
SRSF4-206ENST00000605204 UGCGQ16739 394 aa21.57■■□□□ 1.04
SRSF4-206ENST00000605204 EXOC8Q8IYI6 725 aa21.57■■□□□ 1.04
SRSF4-206ENST00000605204 KIAA0319LQ8IZA0 1049 aa21.57■■□□□ 1.04
SRSF4-206ENST00000605204 PPM1EQ8WY54 764 aa21.57■■□□□ 1.04
SRSF4-206ENST00000605204 MAP7D2Q96T17 732 aa21.57■■□□□ 1.04
SRSF4-206ENST00000605204 FTHL17Q9BXU8 183 aa21.57■■□□□ 1.04
SRSF4-206ENST00000605204 CELF4Q9BZC1 486 aaKnown RBP21.57■■□□□ 1.04
SRSF4-206ENST00000605204 COL4A4P53420 1690 aaPredicted RBP21.56■■□□□ 1.04
SRSF4-206ENST00000605204 CDC42EP1Q00587 391 aa21.56■■□□□ 1.04
SRSF4-206ENST00000605204 SPIRE1Q08AE8 756 aa21.56■■□□□ 1.04
SRSF4-206ENST00000605204 LPIN1Q14693 890 aa21.56■■□□□ 1.04
SRSF4-206ENST00000605204 TJAP1Q5JTD0 557 aa21.56■■□□□ 1.04
SRSF4-206ENST00000605204 MTMR9Q96QG7 549 aa21.56■■□□□ 1.04
SRSF4-206ENST00000605204 SEPT9Q9UHD8 586 aaPredicted RBP21.56■■□□□ 1.04
SRSF4-206ENST00000605204 SMC3Q9UQE7 1217 aa21.56■■□□□ 1.04
SRSF4-206ENST00000605204 TRIP12Q14669 1992 aaPredicted RBP21.55■■□□□ 1.04
SRSF4-206ENST00000605204 EML1O00423 815 aa21.55■■□□□ 1.04
SRSF4-206ENST00000605204 GJB5O95377 273 aa21.55■■□□□ 1.04
SRSF4-206ENST00000605204 RABGGTBP53611 331 aa21.55■■□□□ 1.04
SRSF4-206ENST00000605204 TARBP2Q15633 366 aaKnown RBP21.55■■□□□ 1.04
SRSF4-206ENST00000605204 C4orf19Q8IY42 314 aa21.55■■□□□ 1.04
SRSF4-206ENST00000605204 METTL13Q8N6R0 699 aa21.55■■□□□ 1.04
SRSF4-206ENST00000605204 ZBTB10Q96DT7 871 aa21.55■■□□□ 1.04
SRSF4-206ENST00000605204 GAS2L1Q99501 681 aaPredicted RBP21.55■■□□□ 1.04
SRSF4-206ENST00000605204 ZBED2Q9BTP6 218 aa21.55■■□□□ 1.04
SRSF4-206ENST00000605204 ZSWIM4Q9H7M6 989 aa21.55■■□□□ 1.04
SRSF4-206ENST00000605204 TTC12Q9H892 705 aaPredicted RBP21.55■■□□□ 1.04
SRSF4-206ENST00000605204 KAT6AQ92794 2004 aa21.54■■□□□ 1.04
SRSF4-206ENST00000605204 TLL1O43897 1013 aa21.54■■□□□ 1.04
SRSF4-206ENST00000605204 MYOGP15173 224 aa21.54■■□□□ 1.04
SRSF4-206ENST00000605204 GJB2P29033 226 aa21.54■■□□□ 1.04
SRSF4-206ENST00000605204 MCM7P33993 719 aa21.54■■□□□ 1.04
SRSF4-206ENST00000605204 TTC38Q5R3I4 469 aa21.54■■□□□ 1.04
SRSF4-206ENST00000605204 PPP2R2DQ66LE6 453 aa21.54■■□□□ 1.04
SRSF4-206ENST00000605204 NCAPH2Q6IBW4 605 aa21.54■■□□□ 1.04
SRSF4-206ENST00000605204 BANK1Q8NDB2 785 aa21.54■■□□□ 1.04
SRSF4-206ENST00000605204 RAD9AQ99638 391 aa21.54■■□□□ 1.04
SRSF4-206ENST00000605204 LXNQ9BS40 222 aa21.54■■□□□ 1.04
SRSF4-206ENST00000605204 H3BQV1 296 aa21.53■■□□□ 1.04
SRSF4-206ENST00000605204 DNM2P50570 870 aa21.53■■□□□ 1.04
SRSF4-206ENST00000605204 DEFB103AP81534 67 aa21.53■■□□□ 1.04
SRSF4-206ENST00000605204 PAK2Q13177 524 aa21.53■■□□□ 1.04
SRSF4-206ENST00000605204 TCTN1Q2MV58 587 aa21.53■■□□□ 1.04
SRSF4-206ENST00000605204 EFCAB12Q6NXP0 572 aa21.53■■□□□ 1.04
SRSF4-206ENST00000605204 OTUD6AQ7L8S5 288 aa21.53■■□□□ 1.04
SRSF4-206ENST00000605204 TRMT1LQ7Z2T5 733 aaKnown RBP21.53■■□□□ 1.04
SRSF4-206ENST00000605204 LINC01465Q8N7H1 131 aa21.53■■□□□ 1.04
SRSF4-206ENST00000605204 RBAK-RBAKDNI3L0D1 243 aa21.52■■□□□ 1.04
SRSF4-206ENST00000605204 GAS2O43903 313 aaKnown RBP21.52■■□□□ 1.04
SRSF4-206ENST00000605204 LYPLA2O95372 231 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms