RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 MIS18BP1Q6P0N0 1132 aa16.16■□□□□ 0.18
USE1-210ENST00000601662 ZNF365Q70YC5 407 aa16.16■□□□□ 0.18
USE1-210ENST00000601662 CABP7Q86V35 215 aa16.16■□□□□ 0.18
USE1-210ENST00000601662 CCDC155Q8N6L0 562 aa16.16■□□□□ 0.18
USE1-210ENST00000601662 RASSF8Q8NHQ8 419 aa16.16■□□□□ 0.18
USE1-210ENST00000601662 CCDC34Q96HJ3 373 aa16.16■□□□□ 0.18
USE1-210ENST00000601662 EPSTI1Q96J88 318 aa16.16■□□□□ 0.18
USE1-210ENST00000601662 CDK5RAP3Q96JB5 506 aa16.16■□□□□ 0.18
USE1-210ENST00000601662 CTAGE1Q96RT6 745 aa16.16■□□□□ 0.18
USE1-210ENST00000601662 PCYT2Q99447 389 aa16.16■□□□□ 0.18
USE1-210ENST00000601662 NT5C3AQ9H0P0 336 aa16.16■□□□□ 0.18
USE1-210ENST00000601662 TUFT1Q9NNX1 390 aa16.16■□□□□ 0.18
USE1-210ENST00000601662 IL23AQ9NPF7 189 aa16.16■□□□□ 0.18
USE1-210ENST00000601662 DISC1Q9NRI5 854 aa16.16■□□□□ 0.18
USE1-210ENST00000601662 KDM3AQ9Y4C1 1321 aa16.16■□□□□ 0.18
USE1-210ENST00000601662 A0A1B0GVL5 298 aa16.15■□□□□ 0.18
USE1-210ENST00000601662 TREHO43280 583 aa16.15■□□□□ 0.18
USE1-210ENST00000601662 CHMP2AO43633 222 aa16.15■□□□□ 0.18
USE1-210ENST00000601662 ATG7O95352 703 aa16.15■□□□□ 0.18
USE1-210ENST00000601662 P4HBP07237 508 aaKnown RBP16.15■□□□□ 0.18
USE1-210ENST00000601662 PSAPP07602 524 aa16.15■□□□□ 0.18
USE1-210ENST00000601662 PFKFB1P16118 471 aa16.15■□□□□ 0.18
USE1-210ENST00000601662 CCT6AP40227 531 aaKnown RBP16.15■□□□□ 0.18
USE1-210ENST00000601662 SYKP43405 635 aa16.15■□□□□ 0.18
USE1-210ENST00000601662 STAT5BP51692 787 aa16.15■□□□□ 0.18
USE1-210ENST00000601662 IGBP1P78318 339 aa16.15■□□□□ 0.18
USE1-210ENST00000601662 FAM160A1Q05DH4 1040 aa16.15■□□□□ 0.18
USE1-210ENST00000601662 PTK7Q13308 1070 aa16.15■□□□□ 0.18
USE1-210ENST00000601662 TMEM240Q5SV17 173 aa16.15■□□□□ 0.18
USE1-210ENST00000601662 IQUBQ8NA54 791 aa16.15■□□□□ 0.18
USE1-210ENST00000601662 SNX29Q8TEQ0 813 aa16.15■□□□□ 0.18
USE1-210ENST00000601662 DHX38Q92620 1227 aaKnown RBP16.15■□□□□ 0.18
USE1-210ENST00000601662 HSD17B14Q9BPX1 270 aa16.15■□□□□ 0.18
USE1-210ENST00000601662 EIF2AK1Q9BQI3 630 aaKnown RBP16.15■□□□□ 0.18
USE1-210ENST00000601662 ERAP1Q9NZ08 941 aa16.15■□□□□ 0.18
USE1-210ENST00000601662 HPSEQ9Y251 543 aa16.15■□□□□ 0.18
USE1-210ENST00000601662 RBAK-RBAKDNI3L0D1 243 aa16.14■□□□□ 0.17
USE1-210ENST00000601662 EML1O00423 815 aa16.14■□□□□ 0.17
USE1-210ENST00000601662 FGBP02675 491 aa16.14■□□□□ 0.17
USE1-210ENST00000601662 IQCF3P0C7M6 154 aa16.14■□□□□ 0.17
USE1-210ENST00000601662 GNAT1P11488 350 aa16.14■□□□□ 0.17
USE1-210ENST00000601662 CDC25AP30304 524 aa16.14■□□□□ 0.17
USE1-210ENST00000601662 NDUFA8P51970 172 aa16.14■□□□□ 0.17
USE1-210ENST00000601662 PPFIA1Q13136 1202 aa16.14■□□□□ 0.17
USE1-210ENST00000601662 LRIT3Q3SXY7 679 aa16.14■□□□□ 0.17
USE1-210ENST00000601662 HYIQ5T013 277 aa16.14■□□□□ 0.17
USE1-210ENST00000601662 RRAGBQ5VZM2 374 aa16.14■□□□□ 0.17
USE1-210ENST00000601662 SWSAP1Q6NVH7 229 aa16.14■□□□□ 0.17
USE1-210ENST00000601662 USP49Q70CQ1 688 aa16.14■□□□□ 0.17
USE1-210ENST00000601662 TRMT1LQ7Z2T5 733 aaKnown RBP16.14■□□□□ 0.17
USE1-210ENST00000601662 RPUSD2Q8IZ73 545 aaKnown RBP16.14■□□□□ 0.17
USE1-210ENST00000601662 CAGE1Q8TC20 777 aa16.14■□□□□ 0.17
USE1-210ENST00000601662 WNT8BQ93098 351 aa16.14■□□□□ 0.17
USE1-210ENST00000601662 CUEDC2Q9H467 287 aa16.14■□□□□ 0.17
USE1-210ENST00000601662 TRPC6Q9Y210 931 aa16.14■□□□□ 0.17
USE1-210ENST00000601662 KAT6AQ92794 2004 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 PP2D1A8MPX8 630 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 PITPNM1O00562 1244 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 POLR2DO15514 142 aaKnown RBP16.13■□□□□ 0.17
USE1-210ENST00000601662 LGR5O75473 907 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 SLITRK3O94933 977 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 ZNF202O95125 648 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 CKBP12277 381 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 SELPP16109 830 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 THPOP40225 353 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 QARSP47897 775 aaKnown RBP16.13■□□□□ 0.17
USE1-210ENST00000601662 FAM160B1Q5W0V3 765 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 KANK3Q6NY19 840 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 PSRC1Q6PGN9 363 aaPredicted RBP16.13■□□□□ 0.17
USE1-210ENST00000601662 ABHD15Q6UXT9 468 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 LRRC8DQ7L1W4 858 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 OTOP2Q7RTS6 562 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 CATSPER3Q86XQ3 398 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 FMR1NBQ8N0W7 255 aaPredicted RBP16.13■□□□□ 0.17
USE1-210ENST00000601662 ENGASEQ8NFI3 743 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 LMBR1Q8WVP7 490 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 TIGD1Q96MW7 591 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 MMTAG2Q9BU76 263 aaKnown RBP16.13■□□□□ 0.17
USE1-210ENST00000601662 GOLPH3LQ9H4A5 285 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 ZSWIM4Q9H7M6 989 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 EMSYQ7Z589 1322 aa16.13■□□□□ 0.17
USE1-210ENST00000601662 ZBBXA8MT70 800 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 KINO60870 393 aaKnown RBP16.12■□□□□ 0.17
USE1-210ENST00000601662 XRCC6P12956 609 aaKnown RBP eCLIP16.12■□□□□ 0.17
USE1-210ENST00000601662 INSRRP14616 1297 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 LIG1P18858 919 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 PSMC5P62195 406 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 KARSQ15046 597 aaKnown RBP16.12■□□□□ 0.17
USE1-210ENST00000601662 PLCB4Q15147 1175 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 ZRSR1Q15695 479 aaKnown RBP16.12■□□□□ 0.17
USE1-210ENST00000601662 GRIK4Q16099 956 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 KLHL40Q2TBA0 621 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 ZNF618Q5T7W0 954 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 PDXDC2PQ6P474 469 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 PLPPR4Q7Z2D5 763 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 SERINC5Q86VE9 423 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 TPH2Q8IWU9 490 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 CKAP2LQ8IYA6 745 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 AFAP1L1Q8TED9 768 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 SYAP1Q96A49 352 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms