RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 GPM6BQ13491 265 aa13.09□□□□□ -0.31
SOX2-OT-233ENST00000600778 TMEM266Q2M3C6 531 aa13.09□□□□□ -0.31
SOX2-OT-233ENST00000600778 LRCH2Q5VUJ6 765 aa13.09□□□□□ -0.31
SOX2-OT-233ENST00000600778 TMEM192Q8IY95 271 aa13.09□□□□□ -0.31
SOX2-OT-233ENST00000600778 KIAA0319LQ8IZA0 1049 aa13.09□□□□□ -0.31
SOX2-OT-233ENST00000600778 FIBCD1Q8N539 461 aa13.09□□□□□ -0.31
SOX2-OT-233ENST00000600778 METTL13Q8N6R0 699 aa13.09□□□□□ -0.31
SOX2-OT-233ENST00000600778 ADAMTS19Q8TE59 1207 aa13.09□□□□□ -0.31
SOX2-OT-233ENST00000600778 LINC01599Q8WXQ3 324 aa13.09□□□□□ -0.31
SOX2-OT-233ENST00000600778 PPP1R16BQ96T49 567 aa13.09□□□□□ -0.31
SOX2-OT-233ENST00000600778 TEKT3Q9BXF9 490 aa13.09□□□□□ -0.31
SOX2-OT-233ENST00000600778 FTHL17Q9BXU8 183 aa13.09□□□□□ -0.31
SOX2-OT-233ENST00000600778 CDHR5Q9HBB8 845 aa13.09□□□□□ -0.31
SOX2-OT-233ENST00000600778 DISC1Q9NRI5 854 aa13.09□□□□□ -0.31
SOX2-OT-233ENST00000600778 TPCN1Q9ULQ1 816 aa13.09□□□□□ -0.31
SOX2-OT-233ENST00000600778 COG5Q9UP83 839 aa13.09□□□□□ -0.31
SOX2-OT-233ENST00000600778 PRRC2BQ5JSZ5 2229 aaKnown RBP13.09□□□□□ -0.31
SOX2-OT-233ENST00000600778 IGSF9BQ9UPX0 1349 aa13.09□□□□□ -0.31
SOX2-OT-233ENST00000600778 H3BNC9 293 aa13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 PFKFB2O60825 505 aa13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 GAS7O60861 476 aa13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 TDP2O95551 362 aa13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 IBSPP21815 317 aaPredicted RBP13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 KCNQ1P51787 676 aa13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 AK2P54819 239 aa13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 NFX1Q12986 1120 aaKnown RBP13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 NPY5RQ15761 445 aa13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 AAK1Q2M2I8 961 aa13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 Q4G0T1 1027 aa13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 GALNT17Q6IS24 598 aa13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 DAGLBQ8NCG7 672 aa13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 SLC5A5Q92911 643 aa13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 HLA-CQ95604 372 aa13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 ZNF689Q96CS4 500 aaPredicted RBP13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 UHRF1Q96T88 793 aaPredicted RBP13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 RIT2Q99578 217 aa13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 UNC45AQ9H3U1 944 aa13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 KDM3AQ9Y4C1 1321 aa13.08□□□□□ -0.32
SOX2-OT-233ENST00000600778 CYP3A7-CYP3A51PA0A087WV96 503 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 TNFRSF10AO00220 468 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 ZNF862O60290 1169 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 RPS6KA5O75582 802 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 C22orf31O95567 290 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 VTNP04004 478 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 BMP1P13497 986 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 CYP3A7P24462 503 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 CTNNB1P35222 781 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 BTG3Q14201 252 aaPredicted RBP13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 NONOQ15233 471 aaKnown RBP eCLIP13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 ANKRD1Q15327 319 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 PTPROQ16827 1216 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 KIZQ2M2Z5 673 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 FAM177A1Q8N128 213 aaPredicted RBP13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 FAM167AQ96KS9 214 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 PHF20Q9BVI0 1012 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 TMX1Q9H3N1 280 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 NRBP2Q9NSY0 501 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 GJB4Q9NTQ9 266 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 CEP131Q9UPN4 1083 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 NOC2LQ9Y3T9 749 aaKnown RBP13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 LOXHD1Q8IVV2 1947 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 ADGRA3Q8IWK6 1321 aa13.07□□□□□ -0.32
SOX2-OT-233ENST00000600778 CUL9Q8IWT3 2517 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 MAGEB2O15479 319 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 PSMD10O75832 226 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 DGKIO75912 1065 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 OATP04181 439 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 XBP1P17861 261 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 SFNP31947 248 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 CLCN3P51790 818 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 JAK3P52333 1124 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 PRKCEQ02156 737 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 UGCGQ16739 394 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 INF2Q27J81 1249 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 LETM2Q2VYF4 491 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 EFCAB12Q6NXP0 572 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 MIER3Q7Z3K6 550 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 KRT25Q7Z3Z0 450 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 NPAS4Q8IUM7 802 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 LRRC71Q8N4P6 559 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 NECAB1Q8N987 351 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 TMEM40Q8WWA1 233 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 MRPL38Q96DV4 380 aaKnown RBP13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 OSMRQ99650 979 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 RC3H2Q9HBD1 1191 aaKnown RBP13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 ERVK-5Q9HDB9 667 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 ST3GAL5Q9UNP4 418 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 AKT3Q9Y243 479 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 MYH9P35579 1960 aaKnown RBP13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 STK36Q9NRP7 1315 aa13.06□□□□□ -0.32
SOX2-OT-233ENST00000600778 COL4A6Q14031 1691 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 EVPLQ92817 2033 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 CCDC194A0A1B0GVG4 234 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 DENND3A2RUS2 1198 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 GPR182O15218 404 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 MGEA5O60502 916 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 GPR32O75388 356 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 CTDNEP1O95476 244 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 RB1P06400 928 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 LINC00271P0C7V0 271 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms