RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 XRN1Q8IZH2 1706 aaKnown RBP18.52■□□□□ 0.55
SMARCA4-215ENST00000590574 KRT19P08727 400 aa18.52■□□□□ 0.55
SMARCA4-215ENST00000590574 FXR2P51116 673 aaKnown RBP eCLIP18.52■□□□□ 0.555e-7■■■□□ 19.1
SMARCA4-215ENST00000590574 GLYCTKQ8IVS8 523 aa18.52■□□□□ 0.55
SMARCA4-215ENST00000590574 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.52■□□□□ 0.55
SMARCA4-215ENST00000590574 TACO1Q9BSH4 297 aaKnown RBP18.52■□□□□ 0.55
SMARCA4-215ENST00000590574 TMOD4Q9NZQ9 345 aa18.52■□□□□ 0.55
SMARCA4-215ENST00000590574 DAGLAQ9Y4D2 1042 aa18.52■□□□□ 0.55
SMARCA4-215ENST00000590574 APBA3O96018 575 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 AOC3Q16853 763 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 NLRP14Q86W24 1093 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 BANK1Q8NDB2 785 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 SLC37A4O43826 429 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 GRB10Q13322 594 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 FAM133BQ5BKY9 247 aaKnown RBP18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 PAPD7Q5XG87 772 aaKnown RBP18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 STMN2Q93045 179 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 ZNF148Q9UQR1 794 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 GJA3Q9Y6H8 435 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 SLC8A1P32418 973 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 PAF1Q8N7H5 531 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 PROCA1Q8NCQ7 364 aaPredicted RBP18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 ACTR5Q9H9F9 607 aaPredicted RBP18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 KMT5AQ9NQR1 393 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 AMACRQ9UHK6 382 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 PLAGL2Q9UPG8 496 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 SMIM22K7EJ46 135 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 SUN1O94901 812 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 PCK1P35558 622 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 ZKSCAN8Q15776 578 aaPredicted RBP18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 P3H4Q92791 437 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 ARHGEF2Q92974 986 aaKnown RBP18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 TSNARE1Q96NA8 513 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 SPATA31A1Q5TZJ5 1347 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 PALM3A6NDB9 673 aaPredicted RBP18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 PRELPP51888 382 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 MMS22LQ6ZRQ5 1243 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 SH3RF1Q7Z6J0 888 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 BBOF1Q8ND07 529 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 EIF2AK1Q9BQI3 630 aaKnown RBP18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 INTS2Q9H0H0 1204 aaKnown RBP18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 FBXL5Q9UKA1 691 aa18.51■□□□□ 0.55
SMARCA4-215ENST00000590574 MAN1A1P33908 653 aa18.5■□□□□ 0.55
SMARCA4-215ENST00000590574 RPUSD2Q8IZ73 545 aaKnown RBP18.5■□□□□ 0.55
SMARCA4-215ENST00000590574 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.5■□□□□ 0.55
SMARCA4-215ENST00000590574 CAPN6Q9Y6Q1 641 aa18.5■□□□□ 0.55
SMARCA4-215ENST00000590574 ZRANB2O95218 330 aaKnown RBP eCLIP18.5■□□□□ 0.55
SMARCA4-215ENST00000590574 SEMA6BQ9H3T3 888 aa18.5■□□□□ 0.55
SMARCA4-215ENST00000590574 ANAPC5Q9UJX4 755 aa18.5■□□□□ 0.55
SMARCA4-215ENST00000590574 SLIT3O75094 1523 aa18.5■□□□□ 0.55
SMARCA4-215ENST00000590574 ANKFY1Q9P2R3 1169 aa18.5■□□□□ 0.55
SMARCA4-215ENST00000590574 COL5A2P05997 1499 aaPredicted RBP18.5■□□□□ 0.55
SMARCA4-215ENST00000590574 EIF3HO15372 352 aaKnown RBP eCLIP18.5■□□□□ 0.551e-6■□□□□ 8.3
SMARCA4-215ENST00000590574 DAPK3O43293 454 aa18.5■□□□□ 0.55
SMARCA4-215ENST00000590574 GCLMP48507 274 aa18.5■□□□□ 0.55
SMARCA4-215ENST00000590574 TAB3Q8N5C8 712 aaPredicted RBP18.5■□□□□ 0.55
SMARCA4-215ENST00000590574 TCP11Q8WWU5 503 aa18.5■□□□□ 0.55
SMARCA4-215ENST00000590574 RSAD2Q8WXG1 361 aa18.5■□□□□ 0.55
SMARCA4-215ENST00000590574 JPH2Q9BR39 696 aaPredicted RBP18.5■□□□□ 0.55
SMARCA4-215ENST00000590574 F5H6K3 240 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 NPR1P16066 1061 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 PPP2R2AP63151 447 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 KLRC3Q07444 240 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 NIM1KQ8IY84 436 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 SLC17A8Q8NDX2 589 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 TBK1Q9UHD2 729 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 PCDHB4Q9Y5E5 795 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 TRIM49P0CI25 452 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 TRIM49CP0CI26 452 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 CARSP49589 748 aaKnown RBP18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 NAB2Q15742 525 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 C6orf118Q5T5N4 469 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 PPP1R21Q6ZMI0 780 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 DNAJC17Q9NVM6 304 aaKnown RBP18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 GMNCA6NCL1 334 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 POC1B-GALNT4F8VUJ3 575 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 PDXKO00764 312 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 KRT14P02533 472 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 MMEP08473 750 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 UCHL3P15374 230 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 E2F5Q15329 346 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 JMJD4Q9H9V9 463 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 KCNG1Q9UIX4 513 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 SYNGAP1Q96PV0 1343 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 ADCY2Q08462 1091 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 CDAN1Q8IWY9 1227 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 PALM2Q8IXS6 379 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 SREK1Q8WXA9 508 aaKnown RBP18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 REEP2Q9BRK0 252 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 LTN1O94822 1766 aa18.49■□□□□ 0.55
SMARCA4-215ENST00000590574 NDC80O14777 642 aa18.48■□□□□ 0.55
SMARCA4-215ENST00000590574 ACSL3O95573 720 aa18.48■□□□□ 0.55
SMARCA4-215ENST00000590574 KLRC1P26715 233 aa18.48■□□□□ 0.55
SMARCA4-215ENST00000590574 SOX5P35711 763 aa18.48■□□□□ 0.55
SMARCA4-215ENST00000590574 C3orf67Q6ZVT6 689 aa18.48■□□□□ 0.55
SMARCA4-215ENST00000590574 TBC1D16Q8TBP0 767 aa18.48■□□□□ 0.55
SMARCA4-215ENST00000590574 MCUR1Q96AQ8 359 aa18.48■□□□□ 0.55
SMARCA4-215ENST00000590574 ZIM3Q96PE6 472 aa18.48■□□□□ 0.55
SMARCA4-215ENST00000590574 TXNDC16Q9P2K2 825 aa18.48■□□□□ 0.55
SMARCA4-215ENST00000590574 SEPT9Q9UHD8 586 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms