RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 B4DLN1 442 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 CTAGE5O15320 804 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 NR3C2P08235 984 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 ALADP13716 330 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 CCND2P30279 289 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 GNASQ5JWF2 1037 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 TTC38Q5R3I4 469 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 DESI1Q6ICB0 168 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 HFE2Q6ZVN8 426 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 ARMCX2Q7L311 632 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 EEPD1Q7L9B9 569 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 NEK8Q86SG6 692 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 SLC43A3Q8NBI5 491 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 DNERQ8NFT8 737 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 GDPD5Q8WTR4 605 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 TRPV6Q9H1D0 765 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 ZSCAN16Q9H4T2 348 aaPredicted RBP9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 UBE2ZQ9H832 354 aaPredicted RBP9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 RTEL1Q9NZ71 1219 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 TSR3Q9UJK0 312 aaKnown RBP9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 COL4A4P53420 1690 aaPredicted RBP9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 GRIN2DO15399 1336 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 FRMPD4Q14CM0 1322 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 MYH11P35749 1972 aa9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 TRIP12Q14669 1992 aaPredicted RBP9.54□□□□□ -0.88
NEDD4L-218ENST00000587547 ASB14A6NK59 587 aa9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 WNT7AO00755 349 aa9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 DCXO43602 365 aa9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 B4GALT4O60513 344 aa9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 CCNT1O60563 726 aaKnown RBP9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 TDP2O95551 362 aa9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 NCLP19338 710 aaKnown RBP9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 TOB1P50616 345 aaPredicted RBP9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 GJA9P57773 515 aa9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 BEX3Q00994 111 aa9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 CEBPZQ03701 1054 aaKnown RBP9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 VAC14Q08AM6 782 aa9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 ZNF174Q15697 407 aa9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 STXBP2Q15833 593 aa9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 PCNX4Q63HM2 1172 aa9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 WNT2BQ93097 391 aa9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 CHAMP1Q96JM3 812 aa9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 IWS1Q96ST2 819 aa9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 ZDBF2Q9HCK1 2354 aa9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 EVPLQ92817 2033 aa9.53□□□□□ -0.88
NEDD4L-218ENST00000587547 LOXHD1Q8IVV2 1947 aa9.52□□□□□ -0.88
NEDD4L-218ENST00000587547 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 CYP3A4P08684 503 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 KCNA5P22460 613 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 PTGS1P23219 599 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 MCM7P33993 719 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 TRAPPC10P48553 1259 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 USP11P51784 963 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 MRPS9P82933 396 aaKnown RBP9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 ACVR2BQ13705 512 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 CCDC144BQ3MJ40 725 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 LEXMQ3ZCV2 418 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 PRR16Q569H4 304 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 RILPL1Q5EBL4 403 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 BRICD5Q6PL45 260 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 CXCL17Q6UXB2 119 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 SEPT14Q6ZU15 432 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 DEFB128Q7Z7B8 93 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 VSIG10LQ86VR7 867 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 PLA2G4DQ86XP0 818 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 FBXO16Q8IX29 292 aaPredicted RBP9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 RPUSD2Q8IZ73 545 aaKnown RBP9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 PRSS33Q8NF86 280 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 CYP2W1Q8TAV3 490 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 ZNF396Q96N95 335 aaPredicted RBP9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 NAP1L4Q99733 375 aaKnown RBP9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 USB1Q9BQ65 265 aaKnown RBP9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 FTOQ9C0B1 505 aaKnown RBP eCLIP9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 PKD2L1Q9P0L9 805 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 TFIP11Q9UBB9 837 aaKnown RBP9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 PCDHB6Q9Y5E3 794 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 ATP6V1DQ9Y5K8 247 aa9.52□□□□□ -0.89
NEDD4L-218ENST00000587547 LCHNA4D1U4 455 aa9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 FAM86B1E9PN63 330 aa9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 SLC37A4O43826 429 aa9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 EDIL3O43854 480 aa9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 MARCH6O60337 910 aa9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 FAM86B2P0C5J1 330 aa9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 EDNRBP24530 442 aa9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 DNM1Q05193 864 aaKnown RBP9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 ITGA7Q13683 1181 aa9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 CEP55Q53EZ4 464 aa9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 PTCRAQ6ISU1 281 aaPredicted RBP9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 XRRA1Q6P2D8 792 aa9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 LYPD8Q6UX82 237 aa9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 MAMDC4Q6UXC1 1216 aa9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 NLRX1Q86UT6 975 aa9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 HERC6Q8IVU3 1022 aa9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 SCUBE3Q8IX30 993 aa9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 MSL3Q8N5Y2 521 aaKnown RBP9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 CRYGNQ8WXF5 182 aa9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 TNPO1Q92973 898 aaKnown RBP9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 USP28Q96RU2 1077 aa9.51□□□□□ -0.89
NEDD4L-218ENST00000587547 MXRA8Q9BRK3 442 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms