RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 PRCCQ92733 491 aaPredicted RBP11.44□□□□□ -0.58
TOP3A-214ENST00000582981 NOVA2Q9UNW9 492 aaKnown RBP11.44□□□□□ -0.58
TOP3A-214ENST00000582981 TRAPPC3O43617 180 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 SMNDC1O75940 238 aaKnown RBP eCLIP11.44□□□□□ -0.589e-6■■■■□ 24.8
TOP3A-214ENST00000582981 NEFHP12036 1026 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 CTNNA1P35221 906 aaKnown RBP11.44□□□□□ -0.58
TOP3A-214ENST00000582981 RFC4P35249 363 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 ERVK-9P63128 1117 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 PTK2Q05397 1052 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 ADAM9Q13443 819 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 PPP4R3AQ6IN85 833 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 MDM1Q8TC05 714 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 UBLCP1Q8WVY7 318 aaPredicted RBP11.44□□□□□ -0.58
TOP3A-214ENST00000582981 PIK3R5Q8WYR1 880 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 RAPGEF5Q92565 580 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 HAS1Q92839 578 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 AK8Q96MA6 479 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 MTMR9Q96QG7 549 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 TSC22D3Q99576 134 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 SEPT11Q9NVA2 429 aaKnown RBP11.44□□□□□ -0.58
TOP3A-214ENST00000582981 SNED1Q8TER0 1413 aa11.44□□□□□ -0.58
TOP3A-214ENST00000582981 GNAT1P11488 350 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 TM4SF1P30408 202 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 CASP4P49662 377 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 GPSM2P81274 684 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 USH1GQ495M9 461 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 TPTE2Q6XPS3 522 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 CCDC84Q86UT8 332 aaPredicted RBP11.43□□□□□ -0.58
TOP3A-214ENST00000582981 GUF1Q8N442 669 aaKnown RBP11.43□□□□□ -0.58
TOP3A-214ENST00000582981 DAGLBQ8NCG7 672 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 EBF2Q9HAK2 575 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 AMACRQ9UHK6 382 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 PCDHAC2Q9Y5I4 1007 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 CASZ1Q86V15 1759 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 EVI5O60447 810 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 LGR5O75473 907 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 TRIM37O94972 964 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 NR2F2P24468 414 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 GTF2IP78347 998 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 TCP10Q12799 353 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 ASTE1Q2TB18 679 aaPredicted RBP11.43□□□□□ -0.58
TOP3A-214ENST00000582981 SPICE1Q8N0Z3 855 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 ZNF513Q8N8E2 541 aaPredicted RBP11.43□□□□□ -0.58
TOP3A-214ENST00000582981 ARHGEF1Q92888 912 aaKnown RBP11.43□□□□□ -0.58
TOP3A-214ENST00000582981 DNAJC19Q96DA6 116 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 ANKRD2Q9GZV1 360 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 PAPOLBQ9NRJ5 636 aaKnown RBP11.43□□□□□ -0.58
TOP3A-214ENST00000582981 GGA2Q9UJY4 613 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 PCDHA12Q9UN75 941 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 PCDHB13Q9Y5F0 798 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 A0A1W2PQJ5 194 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 CTCFP49711 727 aaPredicted RBP11.43□□□□□ -0.58
TOP3A-214ENST00000582981 KCNH2Q12809 1159 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 PLS1Q14651 629 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 ZNF571Q7Z3V5 609 aaPredicted RBP11.43□□□□□ -0.58
TOP3A-214ENST00000582981 ADGRF4Q8IZF3 695 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 CCT6BQ92526 530 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 SPZ1Q9BXG8 430 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 OSBPL1AQ9BXW6 950 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 NR2E1Q9Y466 385 aa11.43□□□□□ -0.58
TOP3A-214ENST00000582981 SPATA31A1Q5TZJ5 1347 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 LAD1O00515 517 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 POLD1P28340 1107 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 PAPOLAP51003 745 aaKnown RBP11.42□□□□□ -0.58
TOP3A-214ENST00000582981 MAGOHP61326 146 aaKnown RBP11.42□□□□□ -0.58
TOP3A-214ENST00000582981 FKBP3Q00688 224 aaKnown RBP11.42□□□□□ -0.58
TOP3A-214ENST00000582981 ZNF211Q13398 564 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-214ENST00000582981 LAMB3Q13751 1172 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 ASIC2Q16515 512 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 SCFD1Q8WVM8 642 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 MAGOHBQ96A72 148 aaKnown RBP11.42□□□□□ -0.58
TOP3A-214ENST00000582981 ELMO3Q96BJ8 720 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 TRIM51Q9BSJ1 452 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 CUEDC2Q9H467 287 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 DDX4Q9NQI0 724 aaKnown RBP11.42□□□□□ -0.58
TOP3A-214ENST00000582981 HOMER3Q9NSC5 361 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 ATP6V0A2Q9Y487 856 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 UBAP1LF5GYI3 381 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 DAPK3O43293 454 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 CTNND1O60716 968 aaKnown RBP11.42□□□□□ -0.58
TOP3A-214ENST00000582981 MYL1P05976 194 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 PLA2G4BP0C869 781 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 UBXN2AP68543 259 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 USP4Q13107 963 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 ANKS4BQ8N8V4 417 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 RDH13Q8NBN7 331 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 CCDC197Q8NCU1 140 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 NEDD1Q8NHV4 660 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 WDR66Q8TBY9 1149 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 TAF4BQ92750 862 aa11.42□□□□□ -0.58
TOP3A-214ENST00000582981 CNOT8Q9UFF9 292 aaKnown RBP11.42□□□□□ -0.58
TOP3A-214ENST00000582981 ZBTB39O15060 712 aa11.41□□□□□ -0.58
TOP3A-214ENST00000582981 CHMP2AO43633 222 aa11.41□□□□□ -0.58
TOP3A-214ENST00000582981 MED24O75448 989 aa11.41□□□□□ -0.58
TOP3A-214ENST00000582981 MYBP10242 640 aa11.41□□□□□ -0.58
TOP3A-214ENST00000582981 BYSLQ13895 437 aaKnown RBP11.41□□□□□ -0.58
TOP3A-214ENST00000582981 CDC37Q16543 378 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-214ENST00000582981 FIGNQ5HY92 759 aa11.41□□□□□ -0.58
TOP3A-214ENST00000582981 UBAP2Q5T6F2 1119 aaKnown RBP11.41□□□□□ -0.58
TOP3A-214ENST00000582981 AADACL2Q6P093 401 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms