RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 PCDHA2Q9Y5H9 948 aa22.41■■□□□ 1.18
TOP3A-213ENST00000582230 CUTAO60888 179 aa22.4■■□□□ 1.18
TOP3A-213ENST00000582230 BFSP2Q13515 415 aa22.4■■□□□ 1.18
TOP3A-213ENST00000582230 MTERF2Q49AM1 385 aa22.4■■□□□ 1.18
TOP3A-213ENST00000582230 HYIQ5T013 277 aa22.4■■□□□ 1.18
TOP3A-213ENST00000582230 CABP7Q86V35 215 aa22.4■■□□□ 1.18
TOP3A-213ENST00000582230 ZNF579Q8NAF0 562 aaKnown RBP22.4■■□□□ 1.18
TOP3A-213ENST00000582230 CAGE1Q8TC20 777 aa22.4■■□□□ 1.18
TOP3A-213ENST00000582230 CDK5RAP3Q96JB5 506 aa22.4■■□□□ 1.18
TOP3A-213ENST00000582230 CEP170P1Q96L14 293 aa22.4■■□□□ 1.18
TOP3A-213ENST00000582230 SPATA32Q96LK8 384 aa22.4■■□□□ 1.18
TOP3A-213ENST00000582230 CLIC6Q96NY7 704 aa22.4■■□□□ 1.18
TOP3A-213ENST00000582230 HIPK3Q9H422 1215 aa22.4■■□□□ 1.18
TOP3A-213ENST00000582230 DBR1Q9UK59 544 aaKnown RBP22.4■■□□□ 1.18
TOP3A-213ENST00000582230 TRIM43BA6NCK2 446 aa22.39■■□□□ 1.17
TOP3A-213ENST00000582230 PITPNM1O00562 1244 aa22.39■■□□□ 1.17
TOP3A-213ENST00000582230 C22orf31O95567 290 aa22.39■■□□□ 1.17
TOP3A-213ENST00000582230 TXLNAP40222 546 aa22.39■■□□□ 1.17
TOP3A-213ENST00000582230 ME1P48163 572 aa22.39■■□□□ 1.17
TOP3A-213ENST00000582230 RBL2Q08999 1139 aa22.39■■□□□ 1.17
TOP3A-213ENST00000582230 TBC1D8BQ0IIM8 1120 aa22.39■■□□□ 1.17
TOP3A-213ENST00000582230 XKR9Q5GH70 373 aa22.39■■□□□ 1.17
TOP3A-213ENST00000582230 POTEGQ6S5H5 508 aa22.39■■□□□ 1.17
TOP3A-213ENST00000582230 SH3RF1Q7Z6J0 888 aa22.39■■□□□ 1.17
TOP3A-213ENST00000582230 RPAINQ86UA6 219 aa22.39■■□□□ 1.17
TOP3A-213ENST00000582230 RETREG2Q8NC44 543 aa22.39■■□□□ 1.17
TOP3A-213ENST00000582230 PIGOQ8TEQ8 1089 aa22.39■■□□□ 1.17
TOP3A-213ENST00000582230 LEO1Q8WVC0 666 aaPredicted RBP22.39■■□□□ 1.17
TOP3A-213ENST00000582230 TRIM43Q96BQ3 446 aaPredicted RBP22.39■■□□□ 1.17
TOP3A-213ENST00000582230 CALML4Q96GE6 196 aa22.39■■□□□ 1.17
TOP3A-213ENST00000582230 CCDC43Q96MW1 224 aaKnown RBP22.39■■□□□ 1.17
TOP3A-213ENST00000582230 JPH2Q9BR39 696 aaPredicted RBP22.39■■□□□ 1.17
TOP3A-213ENST00000582230 NOC4LQ9BVI4 516 aaKnown RBP22.39■■□□□ 1.17
TOP3A-213ENST00000582230 CCSER1Q9C0I3 900 aa22.39■■□□□ 1.17
TOP3A-213ENST00000582230 DDX19AQ9NUU7 478 aaKnown RBP22.39■■□□□ 1.17
TOP3A-213ENST00000582230 KIAA1024Q9UPX6 916 aa22.39■■□□□ 1.17
TOP3A-213ENST00000582230 SMIM35A0A1B0GVV1 85 aa22.38■■□□□ 1.17
TOP3A-213ENST00000582230 TMEM150BA6NC51 233 aa22.38■■□□□ 1.17
TOP3A-213ENST00000582230 ZBTB39O15060 712 aa22.38■■□□□ 1.17
TOP3A-213ENST00000582230 CAND2O75155 1236 aa22.38■■□□□ 1.17
TOP3A-213ENST00000582230 RAG1P15918 1043 aa22.38■■□□□ 1.17
TOP3A-213ENST00000582230 ECM1Q16610 540 aa22.38■■□□□ 1.17
TOP3A-213ENST00000582230 PLA2G4FQ68DD2 849 aa22.38■■□□□ 1.17
TOP3A-213ENST00000582230 RSPH3Q86UC2 560 aa22.38■■□□□ 1.17
TOP3A-213ENST00000582230 CEP89Q96ST8 783 aa22.38■■□□□ 1.17
TOP3A-213ENST00000582230 DNM3Q9UQ16 869 aa22.38■■□□□ 1.17
TOP3A-213ENST00000582230 TIMP1P01033 207 aa22.37■■□□□ 1.17
TOP3A-213ENST00000582230 TMOD1P28289 359 aa22.37■■□□□ 1.17
TOP3A-213ENST00000582230 RFC5P40937 340 aa22.37■■□□□ 1.17
TOP3A-213ENST00000582230 RARRES1P49788 294 aa22.37■■□□□ 1.17
TOP3A-213ENST00000582230 NPEPPSP55786 919 aa22.37■■□□□ 1.17
TOP3A-213ENST00000582230 RUFY4Q6ZNE9 571 aa22.37■■□□□ 1.17
TOP3A-213ENST00000582230 NME8Q8N427 588 aa22.37■■□□□ 1.17
TOP3A-213ENST00000582230 SLC7A3Q8WY07 619 aa22.37■■□□□ 1.17
TOP3A-213ENST00000582230 DHX38Q92620 1227 aaKnown RBP22.37■■□□□ 1.17
TOP3A-213ENST00000582230 SYMPKQ92797 1274 aaKnown RBP22.37■■□□□ 1.17
TOP3A-213ENST00000582230 CHAMP1Q96JM3 812 aa22.37■■□□□ 1.17
TOP3A-213ENST00000582230 PCDHA7Q9UN72 937 aa22.37■■□□□ 1.17
TOP3A-213ENST00000582230 MYH15Q9Y2K3 1946 aa22.37■■□□□ 1.17
TOP3A-213ENST00000582230 MAFO75444 373 aaPredicted RBP22.36■■□□□ 1.17
TOP3A-213ENST00000582230 THPOP40225 353 aa22.36■■□□□ 1.17
TOP3A-213ENST00000582230 ZRSR1Q15695 479 aaKnown RBP22.36■■□□□ 1.17
TOP3A-213ENST00000582230 TRIM71Q2Q1W2 868 aaKnown RBP22.36■■□□□ 1.17
TOP3A-213ENST00000582230 SPECC1Q5M775 1068 aa22.36■■□□□ 1.17
TOP3A-213ENST00000582230 AXDND1Q5T1B0 1012 aaPredicted RBP22.36■■□□□ 1.17
TOP3A-213ENST00000582230 METTL13Q8N6R0 699 aa22.36■■□□□ 1.17
TOP3A-213ENST00000582230 RASSF8Q8NHQ8 419 aa22.36■■□□□ 1.17
TOP3A-213ENST00000582230 EPSTI1Q96J88 318 aa22.36■■□□□ 1.17
TOP3A-213ENST00000582230 SH2D3AQ9BRG2 576 aa22.36■■□□□ 1.17
TOP3A-213ENST00000582230 CCDC39Q9UFE4 941 aa22.36■■□□□ 1.17
TOP3A-213ENST00000582230 ZMYND8Q9ULU4 1186 aaPredicted RBP22.36■■□□□ 1.17
TOP3A-213ENST00000582230 MKI67P46013 3256 aaKnown RBP22.35■■□□□ 1.17
TOP3A-213ENST00000582230 IGKV6-21A0A0C4DH24 114 aa22.35■■□□□ 1.17
TOP3A-213ENST00000582230 GAS2O43903 313 aaKnown RBP22.35■■□□□ 1.17
TOP3A-213ENST00000582230 CKBP12277 381 aa22.35■■□□□ 1.17
TOP3A-213ENST00000582230 SELPP16109 830 aa22.35■■□□□ 1.17
TOP3A-213ENST00000582230 SYN1P17600 705 aa22.35■■□□□ 1.17
TOP3A-213ENST00000582230 DNM2P50570 870 aa22.35■■□□□ 1.17
TOP3A-213ENST00000582230 POLGP54098 1239 aaPredicted RBP22.35■■□□□ 1.17
TOP3A-213ENST00000582230 GRB10Q13322 594 aa22.35■■□□□ 1.17
TOP3A-213ENST00000582230 TMEM119Q4V9L6 283 aa22.35■■□□□ 1.17
TOP3A-213ENST00000582230 EFCAB12Q6NXP0 572 aa22.35■■□□□ 1.17
TOP3A-213ENST00000582230 DNAJB3Q8WWF6 145 aa22.35■■□□□ 1.17
TOP3A-213ENST00000582230 WNT8BQ93098 351 aa22.35■■□□□ 1.17
TOP3A-213ENST00000582230 ZBTB10Q96DT7 871 aa22.35■■□□□ 1.17
TOP3A-213ENST00000582230 PNMA5Q96PV4 448 aa22.35■■□□□ 1.17
TOP3A-213ENST00000582230 PPP1R12CQ9BZL4 782 aa22.35■■□□□ 1.17
TOP3A-213ENST00000582230 DHX33Q9H6R0 707 aaKnown RBP22.35■■□□□ 1.17
TOP3A-213ENST00000582230 MYH9P35579 1960 aaKnown RBP22.35■■□□□ 1.17
TOP3A-213ENST00000582230 ALPK3Q96L96 1907 aa22.34■■□□□ 1.17
TOP3A-213ENST00000582230 A0A087WWV3 80 aa22.34■■□□□ 1.17
TOP3A-213ENST00000582230 ARHGEF35A5YM69 484 aa22.34■■□□□ 1.17
TOP3A-213ENST00000582230 DGAT1O75907 488 aa22.34■■□□□ 1.17
TOP3A-213ENST00000582230 PARNO95453 639 aaKnown RBP22.34■■□□□ 1.17
TOP3A-213ENST00000582230 EYA4O95677 639 aa22.34■■□□□ 1.17
TOP3A-213ENST00000582230 USP49Q70CQ1 688 aa22.34■■□□□ 1.17
TOP3A-213ENST00000582230 KIAA0319LQ8IZA0 1049 aa22.34■■□□□ 1.17
TOP3A-213ENST00000582230 ZNF710Q8N1W2 664 aa22.34■■□□□ 1.17
TOP3A-213ENST00000582230 LBHD1Q9BQE6 289 aaPredicted RBP22.34■■□□□ 1.17
TOP3A-213ENST00000582230 FAM49AQ9H0Q0 323 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms