RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 ARNTL2Q8WYA1 636 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 C16orf70Q9BSU1 422 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 RTEL1Q9NZ71 1219 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 MTUS1Q9ULD2 1270 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 RBM19Q9Y4C8 960 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 PCDHA11Q9Y5I1 949 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 COL4A6Q14031 1691 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 FRMPD4Q14CM0 1322 aa10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 A0A1W2PRU2 124 aa10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 EIF3JO75822 258 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 CTSHP09668 335 aa10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 SUPT20HL2P0C7V6 817 aa10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 HOXD8P13378 290 aaPredicted RBP10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 UBE2SQ16763 222 aa10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 CELF3Q5SZQ8 465 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 RALYLQ86SE5 291 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 VSIG10LQ86VR7 867 aa10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 SESTD1Q86VW0 696 aa10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 MCF2L2Q86YR7 1114 aa10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 ZNF654Q8IZM8 581 aa10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 SRBD1Q8N5C6 995 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 PPTC7Q8NI37 304 aa10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 MAP4K1Q92918 833 aa10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 SPATA33Q96N06 139 aa10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 IWS1Q96ST2 819 aa10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 RAB6BQ9NRW1 208 aa10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 ZNF358Q9NW07 568 aa10.67□□□□□ -0.7
NPLOC4-210ENST00000572824 WDR81Q562E7 1941 aa10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 SH2B2O14492 632 aaPredicted RBP10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 SLC27A2O14975 620 aa10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 ADAMTS3O15072 1205 aa10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 PRC1O43663 620 aa10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 IL2RAP01589 272 aa10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 LGALS2P05162 132 aa10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 SELPP16109 830 aa10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 PTPN11Q06124 597 aaPredicted RBP10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 GRB10Q13322 594 aa10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 DGKDQ16760 1214 aa10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 BRDTQ58F21 947 aaPredicted RBP10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 CYFIP1Q7L576 1253 aa10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 DHX37Q8IY37 1157 aaKnown RBP10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 RPUSD2Q8IZ73 545 aaKnown RBP10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 CRIPAKQ8N1N5 446 aa10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 NCOA7Q8NI08 942 aa10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 PGBD1Q96JS3 809 aa10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 MPHOSPH6Q99547 160 aaKnown RBP10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 MTIF3Q9H2K0 278 aaKnown RBP10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 ZNF395Q9H8N7 513 aaPredicted RBP10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 THEGQ9P2T0 379 aa10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 PNMA2Q9UL42 364 aa10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 USTQ9Y2C2 406 aa10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 MTCH2Q9Y6C9 303 aa10.66□□□□□ -0.7
NPLOC4-210ENST00000572824 PNMA6FA0A0J9YX94 578 aa10.65□□□□□ -0.7
NPLOC4-210ENST00000572824 GCOM1H8Y6P7 765 aaPredicted RBP10.65□□□□□ -0.7
NPLOC4-210ENST00000572824 MEIS2O14770 477 aa10.65□□□□□ -0.7
NPLOC4-210ENST00000572824 AXIN1O15169 862 aa10.65□□□□□ -0.7
NPLOC4-210ENST00000572824 TREHO43280 583 aa10.65□□□□□ -0.7
NPLOC4-210ENST00000572824 CXCL10P02778 98 aa10.65□□□□□ -0.7
NPLOC4-210ENST00000572824 POLR2MP0CAP2 368 aa10.65□□□□□ -0.7
NPLOC4-210ENST00000572824 SMIM10L2AP0DMW4 78 aa10.65□□□□□ -0.7
NPLOC4-210ENST00000572824 SMIM10L2BP0DMW5 78 aa10.65□□□□□ -0.7
NPLOC4-210ENST00000572824 CASTP20810 708 aaKnown RBP10.65□□□□□ -0.7
NPLOC4-210ENST00000572824 CCND2P30279 289 aa10.65□□□□□ -0.7
NPLOC4-210ENST00000572824 RBL2Q08999 1139 aa10.65□□□□□ -0.7
NPLOC4-210ENST00000572824 TRDNQ13061 729 aa10.65□□□□□ -0.7
NPLOC4-210ENST00000572824 CLN3Q13286 438 aa10.65□□□□□ -0.7
NPLOC4-210ENST00000572824 BFSP2Q13515 415 aa10.65□□□□□ -0.7
NPLOC4-210ENST00000572824 C7orf31Q8N865 590 aa10.65□□□□□ -0.7
NPLOC4-210ENST00000572824 AFAP1L1Q8TED9 768 aa10.65□□□□□ -0.7
NPLOC4-210ENST00000572824 SLC9A7Q96T83 725 aa10.65□□□□□ -0.7
NPLOC4-210ENST00000572824 SEZ6LQ9BYH1 1024 aa10.65□□□□□ -0.7
NPLOC4-210ENST00000572824 CARNS1A5YM72 827 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 B4DLN1 442 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 M0R2N6 131 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 KPNA6O60684 536 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 ATP9AO75110 1047 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 LGR5O75473 907 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 CPA1P15085 419 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 HOXC8P31273 242 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 RFC2P35250 354 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 MRPL12P52815 198 aaKnown RBP10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 LAMC2Q13753 1193 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 UTP14CQ5TAP6 766 aaKnown RBP10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 CREB3L3Q68CJ9 461 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 RUFY4Q6ZNE9 571 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 CATIPQ7Z7H3 387 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 LINC00528Q8N1L1 170 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 CAGE1Q8TC20 777 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 INPP4AQ96PE3 977 aaPredicted RBP10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 ASB2Q96Q27 587 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 UIMC1Q96RL1 719 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 ESYT1Q9BSJ8 1104 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 RNPEPQ9H4A4 650 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 SETD4Q9NVD3 440 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 HRH3Q9Y5N1 445 aa10.64□□□□□ -0.71
NPLOC4-210ENST00000572824 EVPLQ92817 2033 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 CNTNAP5Q8WYK1 1306 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 LINC01553A4QN01 128 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 BACH1O14867 736 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms