RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 MAFBQ9Y5Q3 323 aaPredicted RBP11.03□□□□□ -0.64
CIITA-207ENST00000571545 LOXHD1Q8IVV2 1947 aa11.03□□□□□ -0.64
CIITA-207ENST00000571545 WDR81Q562E7 1941 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 GPR182O15218 404 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 DHX15O43143 795 aaKnown RBP11.02□□□□□ -0.65
CIITA-207ENST00000571545 GAS7O60861 476 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 CCNE2O96020 404 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 KLRC1P26715 233 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 CTNNB1P35222 781 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 ANAPC15P60006 121 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 CCT2P78371 535 aaKnown RBP11.02□□□□□ -0.65
CIITA-207ENST00000571545 GPM6BQ13491 265 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 TOB2Q14106 344 aaPredicted RBP11.02□□□□□ -0.65
CIITA-207ENST00000571545 PUS10Q3MIT2 529 aaKnown RBP11.02□□□□□ -0.65
CIITA-207ENST00000571545 NAALADL2Q58DX5 795 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 SWSAP1Q6NVH7 229 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 MOXD1Q6UVY6 613 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 CMTR2Q8IYT2 770 aaKnown RBP11.02□□□□□ -0.65
CIITA-207ENST00000571545 DAGLBQ8NCG7 672 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 PPP2R3CQ969Q6 453 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 MAP7D2Q96T17 732 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 NAP1L4Q99733 375 aaKnown RBP11.02□□□□□ -0.65
CIITA-207ENST00000571545 TEKT3Q9BXF9 490 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 C1orf112Q9NSG2 853 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 PDRG1Q9NUG6 133 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 VPS54Q9P1Q0 977 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 PCDHA4Q9UN74 947 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 FAM50BQ9Y247 325 aa11.02□□□□□ -0.65
CIITA-207ENST00000571545 EVPLQ92817 2033 aa11.01□□□□□ -0.65
CIITA-207ENST00000571545 DENND3A2RUS2 1198 aa11.01□□□□□ -0.65
CIITA-207ENST00000571545 ENPP3O14638 875 aa11.01□□□□□ -0.65
CIITA-207ENST00000571545 BMP1P13497 986 aa11.01□□□□□ -0.65
CIITA-207ENST00000571545 CD52P31358 61 aa11.01□□□□□ -0.65
CIITA-207ENST00000571545 BTG3Q14201 252 aaPredicted RBP11.01□□□□□ -0.65
CIITA-207ENST00000571545 LRCH2Q5VUJ6 765 aa11.01□□□□□ -0.65
CIITA-207ENST00000571545 KRT40Q6A162 431 aa11.01□□□□□ -0.65
CIITA-207ENST00000571545 KRT25Q7Z3Z0 450 aa11.01□□□□□ -0.65
CIITA-207ENST00000571545 BLIDQ8IZY5 108 aa11.01□□□□□ -0.65
CIITA-207ENST00000571545 WASF1Q92558 559 aa11.01□□□□□ -0.65
CIITA-207ENST00000571545 CLP1Q92989 425 aaKnown RBP11.01□□□□□ -0.65
CIITA-207ENST00000571545 NSUN3Q9H649 340 aaKnown RBP11.01□□□□□ -0.65
CIITA-207ENST00000571545 NCOA5Q9HCD5 579 aaKnown RBP11.01□□□□□ -0.65
CIITA-207ENST00000571545 NRBP2Q9NSY0 501 aa11.01□□□□□ -0.65
CIITA-207ENST00000571545 PPP4R2Q9NY27 417 aa11.01□□□□□ -0.65
CIITA-207ENST00000571545 LRFN2Q9ULH4 789 aa11.01□□□□□ -0.65
CIITA-207ENST00000571545 PADI3Q9ULW8 664 aa11.01□□□□□ -0.65
CIITA-207ENST00000571545 FSD2A1L4K1 749 aa11□□□□□ -0.65
CIITA-207ENST00000571545 RPS6KA5O75582 802 aa11□□□□□ -0.65
CIITA-207ENST00000571545 DGKIO75912 1065 aa11□□□□□ -0.65
CIITA-207ENST00000571545 C22orf31O95567 290 aa11□□□□□ -0.65
CIITA-207ENST00000571545 OATP04181 439 aa11□□□□□ -0.65
CIITA-207ENST00000571545 GCFC2P16383 781 aaKnown RBP11□□□□□ -0.65
CIITA-207ENST00000571545 BMPR1AP36894 532 aa11□□□□□ -0.65
CIITA-207ENST00000571545 SARSP49591 514 aaKnown RBP11□□□□□ -0.65
CIITA-207ENST00000571545 CRYBB1P53674 252 aaPredicted RBP11□□□□□ -0.65
CIITA-207ENST00000571545 CDC42EP1Q00587 391 aa11□□□□□ -0.65
CIITA-207ENST00000571545 TFF2Q03403 129 aa11□□□□□ -0.65
CIITA-207ENST00000571545 NONOQ15233 471 aaKnown RBP eCLIP11□□□□□ -0.65
CIITA-207ENST00000571545 CSPP1Q1MSJ5 1256 aa11□□□□□ -0.65
CIITA-207ENST00000571545 Q4G0T1 1027 aa11□□□□□ -0.65
CIITA-207ENST00000571545 SPRED2Q7Z698 418 aa11□□□□□ -0.65
CIITA-207ENST00000571545 BANK1Q8NDB2 785 aa11□□□□□ -0.65
CIITA-207ENST00000571545 TBCKQ8TEA7 893 aa11□□□□□ -0.65
CIITA-207ENST00000571545 TRAPPC12Q8WVT3 735 aa11□□□□□ -0.65
CIITA-207ENST00000571545 RSPH1Q8WYR4 309 aa11□□□□□ -0.65
CIITA-207ENST00000571545 P2RX5Q93086 422 aa11□□□□□ -0.65
CIITA-207ENST00000571545 LENG9Q96B70 501 aa11□□□□□ -0.65
CIITA-207ENST00000571545 ZNF689Q96CS4 500 aaPredicted RBP11□□□□□ -0.65
CIITA-207ENST00000571545 UPF3BQ9BZI7 483 aaKnown RBP11□□□□□ -0.65
CIITA-207ENST00000571545 SLKQ9H2G2 1235 aaPredicted RBP11□□□□□ -0.65
CIITA-207ENST00000571545 UBE2ZQ9H832 354 aaPredicted RBP11□□□□□ -0.65
CIITA-207ENST00000571545 AGO3Q9H9G7 860 aaKnown RBP11□□□□□ -0.65
CIITA-207ENST00000571545 RC3H2Q9HBD1 1191 aaKnown RBP11□□□□□ -0.65
CIITA-207ENST00000571545 DISC1Q9NRI5 854 aa11□□□□□ -0.65
CIITA-207ENST00000571545 GABBR1Q9UBS5 961 aa11□□□□□ -0.65
CIITA-207ENST00000571545 GINS2Q9Y248 185 aa11□□□□□ -0.65
CIITA-207ENST00000571545 STK36Q9NRP7 1315 aa11□□□□□ -0.65
CIITA-207ENST00000571545 BRWD1Q9NSI6 2320 aa11□□□□□ -0.65
CIITA-207ENST00000571545 CCDC194A0A1B0GVG4 234 aa10.99□□□□□ -0.65
CIITA-207ENST00000571545 MSH4O15457 936 aa10.99□□□□□ -0.65
CIITA-207ENST00000571545 HOXA2O43364 376 aa10.99□□□□□ -0.65
CIITA-207ENST00000571545 DKC1O60832 514 aaKnown RBP eCLIP10.99□□□□□ -0.65
CIITA-207ENST00000571545 KCNQ1P51787 676 aa10.99□□□□□ -0.65
CIITA-207ENST00000571545 TMEM62Q0P6H9 643 aa10.99□□□□□ -0.65
CIITA-207ENST00000571545 NFX1Q12986 1120 aaKnown RBP10.99□□□□□ -0.65
CIITA-207ENST00000571545 LEXMQ3ZCV2 418 aa10.99□□□□□ -0.65
CIITA-207ENST00000571545 KIAA0319LQ8IZA0 1049 aa10.99□□□□□ -0.65
CIITA-207ENST00000571545 METTL13Q8N6R0 699 aa10.99□□□□□ -0.65
CIITA-207ENST00000571545 RASGRP4Q8TDF6 673 aa10.99□□□□□ -0.65
CIITA-207ENST00000571545 SLC5A5Q92911 643 aa10.99□□□□□ -0.65
CIITA-207ENST00000571545 JPH2Q9BR39 696 aaPredicted RBP10.99□□□□□ -0.65
CIITA-207ENST00000571545 C1QTNF1Q9BXJ1 281 aa10.99□□□□□ -0.65
CIITA-207ENST00000571545 BRMS1Q9HCU9 246 aa10.99□□□□□ -0.65
CIITA-207ENST00000571545 AAASQ9NRG9 546 aa10.99□□□□□ -0.65
CIITA-207ENST00000571545 FARP1Q9Y4F1 1045 aaPredicted RBP10.99□□□□□ -0.65
CIITA-207ENST00000571545 PCDHB7Q9Y5E2 793 aa10.99□□□□□ -0.65
CIITA-207ENST00000571545 TCF20Q9UGU0 1960 aaKnown RBP10.99□□□□□ -0.65
CIITA-207ENST00000571545 CYP3A7-CYP3A51PA0A087WV96 503 aa10.98□□□□□ -0.65
CIITA-207ENST00000571545 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.98□□□□□ -0.65
CIITA-207ENST00000571545 CARNS1A5YM72 827 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms