RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 SYNPO2Q9UMS6 1093 aa7.28□□□□□ -1.24
LINC00556-201ENST00000569603 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.28□□□□□ -1.24
LINC00556-201ENST00000569603 DIS3Q9Y2L1 958 aaKnown RBP7.28□□□□□ -1.24
LINC00556-201ENST00000569603 RIPK3Q9Y572 518 aa7.28□□□□□ -1.24
LINC00556-201ENST00000569603 TACC3Q9Y6A5 838 aa7.28□□□□□ -1.24
LINC00556-201ENST00000569603 GPAA1O43292 621 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 ADCY6O43306 1168 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 ADAMTS4O75173 837 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 KIF4AO95239 1232 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 SNAI1O95863 264 aaPredicted RBP7.27□□□□□ -1.25
LINC00556-201ENST00000569603 PGK2P07205 417 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 FCER1AP12319 257 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 EPHA1P21709 976 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 ITGB8P26012 769 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 CDC27P30260 824 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 STAT3P40763 770 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 RTP1P59025 263 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 IGBP1P78318 339 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 FAM83BQ5T0W9 1011 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 GJC2Q5T442 439 aaPredicted RBP7.27□□□□□ -1.25
LINC00556-201ENST00000569603 ZSCAN25Q6NSZ9 544 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 SLC39A5Q6ZMH5 540 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 KIAA1211Q6ZU35 1233 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 Q7L0L9 218 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 DPP9Q86TI2 863 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 NOP9Q86U38 636 aaKnown RBP7.27□□□□□ -1.25
LINC00556-201ENST00000569603 NCAPG2Q86XI2 1143 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 ZDHHC13Q8IUH4 622 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 DEFB123Q8N688 67 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 GPR152Q8TDT2 470 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 PIK3R5Q8WYR1 880 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 COL26A1Q96A83 441 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 GUCD1Q96NT3 240 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 NUP88Q99567 741 aaPredicted RBP7.27□□□□□ -1.25
LINC00556-201ENST00000569603 SLF1Q9BQI6 1058 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 TINF2Q9BSI4 451 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 SENP6Q9GZR1 1112 aaPredicted RBP7.27□□□□□ -1.25
LINC00556-201ENST00000569603 KATNBL1Q9H079 304 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 PDLIM7Q9NR12 457 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 CXXC1Q9P0U4 656 aaPredicted RBP7.27□□□□□ -1.25
LINC00556-201ENST00000569603 STOML1Q9UBI4 398 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 RPS6KL1Q9Y6S9 549 aa7.27□□□□□ -1.25
LINC00556-201ENST00000569603 TRIOO75962 3097 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 hCG_2014768A0A024R1R8 64 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 TRIM43BA6NCK2 446 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 F5H6K3 240 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 ZBTB39O15060 712 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 CTAGE5O15320 804 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 GSC2O15499 205 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 DDX3YO15523 660 aaKnown RBP7.26□□□□□ -1.25
LINC00556-201ENST00000569603 DHX15O43143 795 aaKnown RBP7.26□□□□□ -1.25
LINC00556-201ENST00000569603 ADAM11O75078 769 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 SMNDC1O75940 238 aaKnown RBP eCLIP7.26□□□□□ -1.25
LINC00556-201ENST00000569603 ZFYP08048 801 aaPredicted RBP7.26□□□□□ -1.25
LINC00556-201ENST00000569603 FGRP09769 529 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 NKX3-2P78367 333 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 KLRC3Q07444 240 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 TRIM60Q495X7 471 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 ANO1Q5XXA6 986 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 MSL3Q8N5Y2 521 aaKnown RBP7.26□□□□□ -1.25
LINC00556-201ENST00000569603 ARRDC4Q8NCT1 418 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 GMCL1P1Q8NEA9 526 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 KLHDC9Q8NEP7 349 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 UBASH3BQ8TF42 649 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 UTP4Q969X6 686 aaKnown RBP7.26□□□□□ -1.25
LINC00556-201ENST00000569603 TRIM43Q96BQ3 446 aaPredicted RBP7.26□□□□□ -1.25
LINC00556-201ENST00000569603 CEP95Q96GE4 821 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 SEC62Q99442 399 aaKnown RBP7.26□□□□□ -1.25
LINC00556-201ENST00000569603 TEX13BQ9BXU2 312 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 C7orf69Q9H7B7 122 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 SLC38A10Q9HBR0 1119 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 SH2B1Q9NRF2 756 aaPredicted RBP7.26□□□□□ -1.25
LINC00556-201ENST00000569603 MTMR4Q9NYA4 1195 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 STXBP5LQ9Y2K9 1186 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.26□□□□□ -1.25
LINC00556-201ENST00000569603 OAS3Q9Y6K5 1087 aaKnown RBP7.26□□□□□ -1.25
LINC00556-201ENST00000569603 ASTN1O14525 1302 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 ZNF536O15090 1300 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 TTC41PQ6P2S7 1318 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 SYNGAP1Q96PV0 1343 aa7.26□□□□□ -1.25
LINC00556-201ENST00000569603 FSCN2O14926 492 aa7.25□□□□□ -1.25
LINC00556-201ENST00000569603 KIAA0355O15063 1070 aa7.25□□□□□ -1.25
LINC00556-201ENST00000569603 CST5P28325 142 aaPredicted RBP7.25□□□□□ -1.25
LINC00556-201ENST00000569603 CNGA1P29973 690 aa7.25□□□□□ -1.25
LINC00556-201ENST00000569603 COPB2P35606 906 aa7.25□□□□□ -1.25
LINC00556-201ENST00000569603 SCNN1AP37088 669 aa7.25□□□□□ -1.25
LINC00556-201ENST00000569603 ADCYAP1R1P41586 468 aa7.25□□□□□ -1.25
LINC00556-201ENST00000569603 EPHB4P54760 987 aa7.25□□□□□ -1.25
LINC00556-201ENST00000569603 TLE2Q04725 743 aa7.25□□□□□ -1.25
LINC00556-201ENST00000569603 ELOAQ14241 798 aaKnown RBP7.25□□□□□ -1.25
LINC00556-201ENST00000569603 PLS1Q14651 629 aa7.25□□□□□ -1.25
LINC00556-201ENST00000569603 C9orf50Q5SZB4 431 aa7.25□□□□□ -1.25
LINC00556-201ENST00000569603 CASC1Q6TDU7 716 aa7.25□□□□□ -1.25
LINC00556-201ENST00000569603 ANKRD33Q7Z3H0 272 aa7.25□□□□□ -1.25
LINC00556-201ENST00000569603 TRIM42Q8IWZ5 723 aa7.25□□□□□ -1.25
LINC00556-201ENST00000569603 IFNL3Q8IZI9 196 aa7.25□□□□□ -1.25
LINC00556-201ENST00000569603 SDR16C5Q8N3Y7 309 aa7.25□□□□□ -1.25
LINC00556-201ENST00000569603 GPATCH3Q96I76 525 aa7.25□□□□□ -1.25
LINC00556-201ENST00000569603 FAM46AQ96IP4 442 aaKnown RBP7.25□□□□□ -1.25
LINC00556-201ENST00000569603 SPACA7Q96KW9 195 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms