RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 PSMC5P62195 406 aa21.18■□□□□ 0.98
SYNGR3-203ENST00000563869 SP4Q02446 784 aa21.18■□□□□ 0.98
SYNGR3-203ENST00000563869 KRT79Q5XKE5 535 aa21.18■□□□□ 0.98
SYNGR3-203ENST00000563869 C4orf32Q8N8J7 132 aa21.18■□□□□ 0.98
SYNGR3-203ENST00000563869 NECAB3Q96P71 396 aaPredicted RBP21.18■□□□□ 0.98
SYNGR3-203ENST00000563869 C1QTNF1Q9BXJ1 281 aa21.18■□□□□ 0.98
SYNGR3-203ENST00000563869 TUFT1Q9NNX1 390 aa21.18■□□□□ 0.98
SYNGR3-203ENST00000563869 LRWD1Q9UFC0 647 aa21.18■□□□□ 0.98
SYNGR3-203ENST00000563869 KDM3AQ9Y4C1 1321 aa21.18■□□□□ 0.98
SYNGR3-203ENST00000563869 REV3LO60673 3130 aa21.18■□□□□ 0.98
SYNGR3-203ENST00000563869 GSTTP1A0A1W2PQM5 241 aa21.17■□□□□ 0.98
SYNGR3-203ENST00000563869 TECP42680 631 aa21.17■□□□□ 0.98
SYNGR3-203ENST00000563869 QARSP47897 775 aaKnown RBP21.17■□□□□ 0.98
SYNGR3-203ENST00000563869 TFF2Q03403 129 aa21.17■□□□□ 0.98
SYNGR3-203ENST00000563869 PKP1Q13835 747 aa21.17■□□□□ 0.98
SYNGR3-203ENST00000563869 IGSF22Q8N9C0 903 aa21.17■□□□□ 0.98
SYNGR3-203ENST00000563869 KRI1Q8N9T8 703 aaKnown RBP21.17■□□□□ 0.98
SYNGR3-203ENST00000563869 USP28Q96RU2 1077 aa21.17■□□□□ 0.98
SYNGR3-203ENST00000563869 NT5C3AQ9H0P0 336 aa21.17■□□□□ 0.98
SYNGR3-203ENST00000563869 TMEM60Q9H2L4 133 aa21.17■□□□□ 0.98
SYNGR3-203ENST00000563869 UNC45AQ9H3U1 944 aa21.17■□□□□ 0.98
SYNGR3-203ENST00000563869 ZSWIM4Q9H7M6 989 aa21.17■□□□□ 0.98
SYNGR3-203ENST00000563869 NRBP2Q9NSY0 501 aa21.17■□□□□ 0.98
SYNGR3-203ENST00000563869 SRPRBQ9Y5M8 271 aaKnown RBP21.17■□□□□ 0.98
SYNGR3-203ENST00000563869 SPTLC2O15270 562 aa21.16■□□□□ 0.98
SYNGR3-203ENST00000563869 CHMP2AO43633 222 aa21.16■□□□□ 0.98
SYNGR3-203ENST00000563869 CCNE2O96020 404 aa21.16■□□□□ 0.98
SYNGR3-203ENST00000563869 NCAPH2Q6IBW4 605 aa21.16■□□□□ 0.98
SYNGR3-203ENST00000563869 PDXDC2PQ6P474 469 aa21.16■□□□□ 0.98
SYNGR3-203ENST00000563869 OTUD6AQ7L8S5 288 aa21.16■□□□□ 0.98
SYNGR3-203ENST00000563869 SESTD1Q86VW0 696 aa21.16■□□□□ 0.98
SYNGR3-203ENST00000563869 ZNF579Q8NAF0 562 aaKnown RBP21.16■□□□□ 0.98
SYNGR3-203ENST00000563869 LINC00301Q8NCQ3 95 aa21.16■□□□□ 0.98
SYNGR3-203ENST00000563869 BBXQ8WY36 941 aaPredicted RBP21.16■□□□□ 0.98
SYNGR3-203ENST00000563869 FAM122AQ96E09 287 aa21.16■□□□□ 0.98
SYNGR3-203ENST00000563869 PYM1Q9BRP8 204 aaKnown RBP21.16■□□□□ 0.98
SYNGR3-203ENST00000563869 C16orf70Q9BSU1 422 aa21.16■□□□□ 0.98
SYNGR3-203ENST00000563869 POLR3CQ9BUI4 534 aaPredicted RBP21.16■□□□□ 0.98
SYNGR3-203ENST00000563869 TRMT13Q9NUP7 481 aaKnown RBP21.16■□□□□ 0.98
SYNGR3-203ENST00000563869 MAFBQ9Y5Q3 323 aaPredicted RBP21.16■□□□□ 0.98
SYNGR3-203ENST00000563869 MTCH2Q9Y6C9 303 aa21.16■□□□□ 0.98
SYNGR3-203ENST00000563869 XIRP2A4UGR9 3374 aa21.16■□□□□ 0.98
SYNGR3-203ENST00000563869 COL1A2P08123 1366 aa21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 IGSF9BQ9UPX0 1349 aa21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 RRN3P2A6NIE6 340 aa21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 GTPBP6O43824 516 aaPredicted RBP21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 CA3P07451 260 aa21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 CYP2C9P11712 490 aa21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 ACTN1P12814 892 aa21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 XRCC6P12956 609 aaKnown RBP eCLIP21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 NCLP19338 710 aaKnown RBP21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 KCNQ1P51787 676 aa21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 SPIRE1Q08AE8 756 aa21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 NBR1Q14596 966 aa21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 MFSD10Q14728 455 aa21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 PTPAQ15257 358 aa21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 SKIV2LQ15477 1246 aaKnown RBP21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 FOXD4L5Q5VV16 416 aaPredicted RBP21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 C7orf31Q8N865 590 aa21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 FOXD4L4Q8WXT5 416 aaPredicted RBP21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 ZDHHC9Q9Y397 364 aa21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 CLIC4Q9Y696 253 aa21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 TANC1Q9C0D5 1861 aa21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 TRANK1O15050 2925 aa21.15■□□□□ 0.98
SYNGR3-203ENST00000563869 NRCAMQ92823 1304 aa21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 VWA3AA6NCI4 1184 aa21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 RFXAPO00287 272 aa21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 WNT7AO00755 349 aa21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 HBP1O60381 514 aa21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 LYPLA2O95372 231 aa21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 RPA1P27694 616 aa21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 RFC2P35250 354 aa21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 UBA7P41226 1012 aa21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 PSEN2P49810 448 aa21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 SWSAP1Q6NVH7 229 aa21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 DEFB128Q7Z7B8 93 aa21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 C4orf19Q8IY42 314 aa21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 CKAP2LQ8IYA6 745 aa21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 ZNF710Q8N1W2 664 aa21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 PHOSPHO2Q8TCD6 241 aa21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 SPATA32Q96LK8 384 aa21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 SLC9A7Q96T83 725 aa21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 JPH2Q9BR39 696 aaPredicted RBP21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 RCOR1Q9UKL0 485 aa21.14■□□□□ 0.97
SYNGR3-203ENST00000563869 PRRC2BQ5JSZ5 2229 aaKnown RBP21.13■□□□□ 0.97
SYNGR3-203ENST00000563869 HAS3O00219 553 aa21.13■□□□□ 0.97
SYNGR3-203ENST00000563869 CUTAO60888 179 aa21.13■□□□□ 0.97
SYNGR3-203ENST00000563869 DNM1Q05193 864 aaKnown RBP21.13■□□□□ 0.97
SYNGR3-203ENST00000563869 KIAA0753Q2KHM9 967 aa21.13■□□□□ 0.97
SYNGR3-203ENST00000563869 XKR3Q5GH77 459 aa21.13■□□□□ 0.97
SYNGR3-203ENST00000563869 UTP14CQ5TAP6 766 aaKnown RBP21.13■□□□□ 0.97
SYNGR3-203ENST00000563869 ATP8B4Q8TF62 1192 aa21.13■□□□□ 0.97
SYNGR3-203ENST00000563869 CALML4Q96GE6 196 aa21.13■□□□□ 0.97
SYNGR3-203ENST00000563869 CDK5RAP3Q96JB5 506 aa21.13■□□□□ 0.97
SYNGR3-203ENST00000563869 CCDC43Q96MW1 224 aaKnown RBP21.13■□□□□ 0.97
SYNGR3-203ENST00000563869 GABBR1Q9UBS5 961 aa21.13■□□□□ 0.97
SYNGR3-203ENST00000563869 CCDC39Q9UFE4 941 aa21.13■□□□□ 0.97
SYNGR3-203ENST00000563869 COG5Q9UP83 839 aa21.13■□□□□ 0.97
SYNGR3-203ENST00000563869 POTEB3A0JP26 581 aa21.12■□□□□ 0.97
SYNGR3-203ENST00000563869 SORBS3O60504 671 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms