RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 ERLIN1O75477 346 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 APBA3O96018 575 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 KCNA6P17658 529 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 SFPQP23246 707 aaKnown RBP eCLIP7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 ZNF131P52739 623 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 CCT2P78371 535 aaKnown RBP7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 PDCD2Q16342 344 aaPredicted RBP7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 ISM2Q6H9L7 571 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 ENOSF1Q7L5Y1 443 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 STAG2Q8N3U4 1231 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 CEP112Q8N8E3 955 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 AFAP1L1Q8TED9 768 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 UCMAQ8WVF2 138 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 UBXN10Q96LJ8 280 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 DZANK1Q9NVP4 752 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 MARF1Q9Y4F3 1742 aaKnown RBP7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 ABCC4O15439 1325 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 NPHP3Q7Z494 1330 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 C19orf81C9J6K1 198 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 EIF3FO00303 357 aaPredicted RBP7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 KHNYNO15037 678 aaKnown RBP7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 FSBPO95073 299 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 HOXB3P14651 431 aaPredicted RBP7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 SMARCA1P28370 1054 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 CCT5P48643 541 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 CLNS1AP54105 237 aaKnown RBP7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 ERVK-21P61565 698 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 EIF4A2Q14240 407 aaKnown RBP7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 SF1Q15637 639 aaKnown RBP7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 FNDC3BQ53EP0 1204 aaKnown RBP7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 ABHD17CQ6PCB6 329 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 KRT25Q7Z3Z0 450 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 C7orf61Q8IZ16 206 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 GIMAP8Q8ND71 665 aaPredicted RBP7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 ACRBPQ8NEB7 543 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 KLHL6Q8WZ60 621 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 APEX2Q9UBZ4 518 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 CAPN7Q9Y6W3 813 aa7.43□□□□□ -1.22
TSPAN3-209ENST00000560715 TRIM64CA6NLI5 447 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 BECN2A8MW95 431 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 TLR5O60602 858 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 PECAM1P16284 738 aaPredicted RBP7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 GCKP35557 465 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 FLT3P36888 993 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 STX1AQ16623 288 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 NUGGCQ68CJ6 796 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 B3GNT9Q6UX72 402 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 C11orf57Q6ZUT1 292 aaPredicted RBP7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 LIX1LQ8IVB5 337 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 SEC62Q99442 399 aaKnown RBP7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 BHMT2Q9H2M3 363 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 KIAA1586Q9HCI6 787 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 MKS1Q9NXB0 559 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 GOLGA6L4A6NEF3 574 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 TBX18O95935 607 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 TP53P04637 393 aaPredicted RBP7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 ARAFP10398 606 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 CTCFP49711 727 aaPredicted RBP7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 ROR1Q01973 937 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 ACAP2Q15057 778 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 TBC1D25Q3MII6 688 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 DHX40Q8IX18 779 aaKnown RBP7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 GRAMD1CQ8IYS0 662 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 ESX1Q8N693 406 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 DRAXINQ8NBI3 349 aaPredicted RBP7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 WDR12Q9GZL7 423 aaKnown RBP7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 KIF9Q9HAQ2 790 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 LIMCH1Q9UPQ0 1083 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 SBNO1A3KN83 1393 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 KIF24Q5T7B8 1368 aa7.42□□□□□ -1.22
TSPAN3-209ENST00000560715 A0A087WZG4 1122 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 PABPN1LA6NDY0 278 aaKnown RBP7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 TRIM64A6NGJ6 449 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 TRIM64BA6NI03 449 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 MYO1FO00160 1098 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 TMCC2O75069 709 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 PRPHP41219 470 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 WNT7BP56706 349 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 SLC8A3P57103 927 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 SH3BP2P78314 561 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 AP3B2Q13367 1082 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 CASP8Q14790 479 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 PPP2R5BQ15173 497 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 ZSCAN1Q8NBB4 408 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 MSANTD4Q8NCY6 345 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 AHCYL2Q96HN2 611 aaKnown RBP7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 SCAND2PQ9GZW5 306 aaPredicted RBP7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 ANKZF1Q9H8Y5 726 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 LRP2BPQ9P2M1 347 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 PPP1R9AQ9ULJ8 1098 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 ARHGEF10O15013 1369 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 FLT4P35916 1363 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 RBAK-RBAKDNI3L0D1 243 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 DDX3XO00571 662 aaKnown RBP eCLIP7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 PRPF6O94906 941 aaKnown RBP7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 SLC3A2P08195 630 aaKnown RBP7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 AARSP49588 968 aaKnown RBP eCLIP7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 MMP16P51512 607 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 CCDC38Q502W7 563 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms