RNA–Protein interactions for RNA: ENST00000560673.1

KNSTRN-211, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-211ENST00000560673 C1QTNF9BB2RNN3 333 aa13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 LILRB5O75023 590 aa13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 ZIC2O95409 532 aaPredicted RBP13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 C1QTNF9P0C862 333 aa13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 MRPS6P82932 125 aaKnown RBP13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 PAK2Q13177 524 aa13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 AAMPQ13685 434 aa13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 BMS1Q14692 1282 aaKnown RBP13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 FAM102BQ5T8I3 360 aa13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 IER5Q5VY09 327 aa13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 CABP7Q86V35 215 aa13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 TRIM50Q86XT4 487 aa13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 IFNL3Q8IZI9 196 aa13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 SLC44A3Q8N4M1 653 aa13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 TMEM57Q8N5G2 664 aa13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 RSAD2Q8WXG1 361 aa13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 FRAT1Q92837 279 aaPredicted RBP13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 BCO2Q9BYV7 579 aa13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 NACAP1Q9BZK3 213 aa13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 FOXQ1Q9C009 403 aa13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 CWH43Q9H720 699 aa13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 RAB23Q9ULC3 237 aa13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 LHX6Q9UPM6 363 aa13.22□□□□□ -0.29
KNSTRN-211ENST00000560673 DENND4AQ7Z401 1863 aa13.21□□□□□ -0.29
KNSTRN-211ENST00000560673 PATL2C9JE40 543 aaKnown RBP13.21□□□□□ -0.29
KNSTRN-211ENST00000560673 GPAA1O43292 621 aa13.21□□□□□ -0.29
KNSTRN-211ENST00000560673 LRP3O75074 770 aa13.21□□□□□ -0.29
KNSTRN-211ENST00000560673 RPLP2P05387 115 aaKnown RBP13.21□□□□□ -0.29
KNSTRN-211ENST00000560673 NOVP48745 357 aa13.21□□□□□ -0.29
KNSTRN-211ENST00000560673 PPARAQ07869 468 aa13.21□□□□□ -0.29
KNSTRN-211ENST00000560673 IL31Q6EBC2 164 aa13.21□□□□□ -0.29
KNSTRN-211ENST00000560673 DCLRE1AQ6PJP8 1040 aa13.21□□□□□ -0.29
KNSTRN-211ENST00000560673 KCNT2Q6UVM3 1135 aa13.21□□□□□ -0.29
KNSTRN-211ENST00000560673 GPR149Q86SP6 731 aa13.21□□□□□ -0.29
KNSTRN-211ENST00000560673 OSBP2Q969R2 916 aa13.21□□□□□ -0.29
KNSTRN-211ENST00000560673 TUBE1Q9UJT0 475 aa13.21□□□□□ -0.29
KNSTRN-211ENST00000560673 KAT6AQ92794 2004 aa13.21□□□□□ -0.29
KNSTRN-211ENST00000560673 FNDC1Q4ZHG4 1894 aaPredicted RBP13.21□□□□□ -0.3
KNSTRN-211ENST00000560673 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 M0QZ92 97 aa13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 LRRN2O75325 713 aa13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 PDHBP11177 359 aa13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 TOP1P11387 765 aaKnown RBP13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 EPCAMP16422 314 aa13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 PDE4AP27815 886 aa13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 RING1Q06587 406 aa13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 ZNF543Q08ER8 600 aa13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 PTPN14Q15678 1187 aa13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 LETM2Q2VYF4 491 aa13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 UTP14CQ5TAP6 766 aaKnown RBP13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 C20orf194Q5TEA3 1177 aa13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 APPBP2Q92624 585 aa13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 GLG1Q92896 1179 aa13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 NXPE3Q969Y0 559 aa13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 KIF1BPQ96EK5 621 aa13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 SHDQ96IW2 340 aa13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 ZNF558Q96NG5 402 aa13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 PDCD2LQ9BRP1 358 aa13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 SPG21Q9NZD8 308 aa13.2□□□□□ -0.3
KNSTRN-211ENST00000560673 RANBP6O60518 1105 aaKnown RBP13.19□□□□□ -0.3
KNSTRN-211ENST00000560673 CXCL14O95715 111 aa13.19□□□□□ -0.3
KNSTRN-211ENST00000560673 MS4A1P11836 297 aa13.19□□□□□ -0.3
KNSTRN-211ENST00000560673 PPFIA1Q13136 1202 aa13.19□□□□□ -0.3
KNSTRN-211ENST00000560673 LAIR1Q6GTX8 287 aa13.19□□□□□ -0.3
KNSTRN-211ENST00000560673 METTL7BQ6UX53 244 aa13.19□□□□□ -0.3
KNSTRN-211ENST00000560673 CENPQQ7L2Z9 268 aaPredicted RBP13.19□□□□□ -0.3
KNSTRN-211ENST00000560673 VSIG10LQ86VR7 867 aa13.19□□□□□ -0.3
KNSTRN-211ENST00000560673 NELL1Q92832 810 aa13.19□□□□□ -0.3
KNSTRN-211ENST00000560673 GPKOWQ92917 476 aaPredicted RBP eCLIP13.19□□□□□ -0.3
KNSTRN-211ENST00000560673 TMEM47Q9BQJ4 181 aa13.19□□□□□ -0.3
KNSTRN-211ENST00000560673 NAPBQ9H115 298 aa13.19□□□□□ -0.3
KNSTRN-211ENST00000560673 TMX1Q9H3N1 280 aa13.19□□□□□ -0.3
KNSTRN-211ENST00000560673 BCAS3Q9H6U6 928 aa13.19□□□□□ -0.3
KNSTRN-211ENST00000560673 SFXN1Q9H9B4 322 aa13.19□□□□□ -0.3
KNSTRN-211ENST00000560673 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.19□□□□□ -0.3
KNSTRN-211ENST00000560673 MRPL11Q9Y3B7 192 aaKnown RBP13.19□□□□□ -0.3
KNSTRN-211ENST00000560673 IGSF9BQ9UPX0 1349 aa13.18□□□□□ -0.3
KNSTRN-211ENST00000560673 DENND3A2RUS2 1198 aa13.18□□□□□ -0.3
KNSTRN-211ENST00000560673 CFBP00751 764 aa13.18□□□□□ -0.3
KNSTRN-211ENST00000560673 RETP07949 1114 aa13.18□□□□□ -0.3
KNSTRN-211ENST00000560673 GBP2P32456 591 aaPredicted RBP13.18□□□□□ -0.3
KNSTRN-211ENST00000560673 PBX3P40426 434 aa13.18□□□□□ -0.3
KNSTRN-211ENST00000560673 STARD6P59095 220 aa13.18□□□□□ -0.3
KNSTRN-211ENST00000560673 NEDD9Q14511 834 aa13.18□□□□□ -0.3
KNSTRN-211ENST00000560673 GRIK4Q16099 956 aa13.18□□□□□ -0.3
KNSTRN-211ENST00000560673 CDC37Q16543 378 aaPredicted RBP13.18□□□□□ -0.3
KNSTRN-211ENST00000560673 CEP85Q6P2H3 762 aa13.18□□□□□ -0.3
KNSTRN-211ENST00000560673 PRR23CQ6ZRP0 262 aa13.18□□□□□ -0.3
KNSTRN-211ENST00000560673 FAM43BQ6ZT52 329 aaPredicted RBP13.18□□□□□ -0.3
KNSTRN-211ENST00000560673 CYFIP1Q7L576 1253 aa13.18□□□□□ -0.3
KNSTRN-211ENST00000560673 FEZF2Q8TBJ5 459 aa13.18□□□□□ -0.3
KNSTRN-211ENST00000560673 FAM49AQ9H0Q0 323 aaPredicted RBP13.18□□□□□ -0.3
KNSTRN-211ENST00000560673 C1orf112Q9NSG2 853 aa13.18□□□□□ -0.3
KNSTRN-211ENST00000560673 SEMA4GQ9NTN9 838 aa13.18□□□□□ -0.3
KNSTRN-211ENST00000560673 TRPV2Q9Y5S1 764 aa13.18□□□□□ -0.3
KNSTRN-211ENST00000560673 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.17□□□□□ -0.3
KNSTRN-211ENST00000560673 MBLAC1A4D2B0 266 aaPredicted RBP13.17□□□□□ -0.3
KNSTRN-211ENST00000560673 TMEM8BA6NDV4 472 aa13.17□□□□□ -0.3
KNSTRN-211ENST00000560673 SRRM3A6NNA2 597 aaPredicted RBP13.17□□□□□ -0.3
KNSTRN-211ENST00000560673 TAF4O00268 1085 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms