RNA–Protein interactions for RNA: ENST00000560631.1

RNF31-222, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-222	ENST00000560631	C4orf19	Q8IY42	314 aa		9.04	□□□□□ -0.96
RNF31-222	ENST00000560631	HS6ST3	Q8IZP7	471 aa		9.04	□□□□□ -0.96
RNF31-222	ENST00000560631	CCDC155	Q8N6L0	562 aa		9.04	□□□□□ -0.96
RNF31-222	ENST00000560631	NEK9	Q8TD19	979 aa		9.04	□□□□□ -0.96
RNF31-222	ENST00000560631	LMBR1	Q8WVP7	490 aa		9.04	□□□□□ -0.96
RNF31-222	ENST00000560631	UIMC1	Q96RL1	719 aa		9.04	□□□□□ -0.96
RNF31-222	ENST00000560631	LBHD1	Q9BQE6	289 aa	Predicted RBP	9.04	□□□□□ -0.96
RNF31-222	ENST00000560631	NIFK	Q9BYG3	293 aa	Known RBP	9.04	□□□□□ -0.96
RNF31-222	ENST00000560631	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	9.04	□□□□□ -0.96
RNF31-222	ENST00000560631	TTC12	Q9H892	705 aa	Predicted RBP	9.04	□□□□□ -0.96
RNF31-222	ENST00000560631	NRBP2	Q9NSY0	501 aa		9.04	□□□□□ -0.96
RNF31-222	ENST00000560631	SETD4	Q9NVD3	440 aa		9.04	□□□□□ -0.96
RNF31-222	ENST00000560631	GABBR1	Q9UBS5	961 aa		9.04	□□□□□ -0.96
RNF31-222	ENST00000560631	MTMR6	Q9Y217	621 aa		9.04	□□□□□ -0.96
RNF31-222	ENST00000560631	SAMM50	Q9Y512	469 aa		9.04	□□□□□ -0.96
RNF31-222	ENST00000560631	PCDHB6	Q9Y5E3	794 aa		9.04	□□□□□ -0.96
RNF31-222	ENST00000560631	MORC2	Q9Y6X9	1032 aa	Predicted RBP	9.04	□□□□□ -0.96
RNF31-222	ENST00000560631	ZBTB42	B2RXF5	422 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	LYPLA2	O95372	231 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	BMP15	O95972	392 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	OR52Z1	P0C646	297 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	CKB	P12277	381 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	ATP2B1	P20020	1258 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	MARK3	P27448	753 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	CYP2C18	P33260	490 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	RFC2	P35250	354 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	TXK	P42681	527 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	QARS	P47897	775 aa	Known RBP	9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	CHMP4BP1	P59074	171 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	FOXK1	P85037	733 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	REST	Q13127	1097 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	PTGDR	Q13258	359 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	PPIG	Q13427	754 aa	Known RBP eCLIP	9.03	□□□□□ -0.96	9e-10	■■■■■ 27.2
RNF31-222	ENST00000560631	XKR3	Q5GH77	459 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	ARL6IP4	Q66PJ3	421 aa	Known RBP	9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	TAF2	Q6P1X5	1199 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	TMEM199	Q8N511	208 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	RETREG2	Q8NC44	543 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	PPP1R13L	Q8WUF5	828 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	BAD	Q92934	168 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	VWCE	Q96DN2	955 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	CEP89	Q96ST8	783 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	HSD17B14	Q9BPX1	270 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	WNT8A	Q9H1J5	351 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	PRDM5	Q9NQX1	630 aa	Predicted RBP	9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	CEP131	Q9UPN4	1083 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	NOD1	Q9Y239	953 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	PPME1	Q9Y570	386 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	PCDHA2	Q9Y5H9	948 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	RANBP2	P49792	3224 aa	Known RBP	9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	MICAL3	Q7RTP6	2002 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	ARID2	Q68CP9	1835 aa		9.03	□□□□□ -0.96
RNF31-222	ENST00000560631	TTC3	P53804	2025 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	SMIM35	A0A1B0GVV1	85 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	VPS37C	A5D8V6	355 aa	Predicted RBP	9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	MAGEB2	O15479	319 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	CHMP2A	O43633	222 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	SLITRK3	O94933	977 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	CXCL10	P02778	98 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	OAT	P04181	439 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	PFKM	P08237	780 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	IQCF3	P0C7M6	154 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	XRCC6	P12956	609 aa	Known RBP eCLIP	9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	SELP	P16109	830 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	KLRC1	P26715	233 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	ATP2C1	P98194	919 aa	Predicted RBP	9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	MDM2	Q00987	491 aa	Predicted RBP	9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	PRKCE	Q02156	737 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	NBR1	Q14596	966 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	UGCG	Q16739	394 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	TRAF7	Q6Q0C0	670 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	MTHFD1L	Q6UB35	978 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	FAM43B	Q6ZT52	329 aa	Predicted RBP	9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	RPUSD2	Q8IZ73	545 aa	Known RBP	9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	NME8	Q8N427	588 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	LINC01465	Q8N7H1	131 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	IGSF22	Q8N9C0	903 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	WNT8B	Q93098	351 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	EIF2AK1	Q9BQI3	630 aa	Known RBP	9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	POLR3C	Q9BUI4	534 aa	Predicted RBP	9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	ZSWIM4	Q9H7M6	989 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	TUFT1	Q9NNX1	390 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	IL23A	Q9NPF7	189 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	TUBE1	Q9UJT0	475 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	SI	P14410	1827 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	UMODL1	Q5DID0	1318 aa		9.02	□□□□□ -0.97
RNF31-222	ENST00000560631	MYH11	P35749	1972 aa		9.01	□□□□□ -0.97
RNF31-222	ENST00000560631	IGKV6-21	A0A0C4DH24	114 aa		9.01	□□□□□ -0.97
RNF31-222	ENST00000560631	C22orf31	O95567	290 aa		9.01	□□□□□ -0.97
RNF31-222	ENST00000560631	HSP90AA1	P07900	732 aa	Known RBP	9.01	□□□□□ -0.97
RNF31-222	ENST00000560631	RPA1	P27694	616 aa		9.01	□□□□□ -0.97
RNF31-222	ENST00000560631	FPGS	Q05932	587 aa		9.01	□□□□□ -0.97
RNF31-222	ENST00000560631	MGAT3	Q09327	533 aa		9.01	□□□□□ -0.97
RNF31-222	ENST00000560631	BECN1	Q14457	450 aa		9.01	□□□□□ -0.97
RNF31-222	ENST00000560631	GPNMB	Q14956	572 aa		9.01	□□□□□ -0.97
RNF31-222	ENST00000560631	TMEM266	Q2M3C6	531 aa		9.01	□□□□□ -0.97
RNF31-222	ENST00000560631	TMEM240	Q5SV17	173 aa		9.01	□□□□□ -0.97
RNF31-222	ENST00000560631	ZNF618	Q5T7W0	954 aa		9.01	□□□□□ -0.97
RNF31-222	ENST00000560631	NCAPH2	Q6IBW4	605 aa		9.01	□□□□□ -0.97
RNF31-222	ENST00000560631	LRRC8D	Q7L1W4	858 aa		9.01	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms