RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 FDPSP14324 419 aaKnown RBP9.04□□□□□ -0.96
LRRC28-219ENST00000560483 CDK7P50613 346 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 USP11P51784 963 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 ACTR2P61160 394 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 INSM1Q01101 510 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-219ENST00000560483 PTPN11Q06124 597 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-219ENST00000560483 NR5A1Q13285 461 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 BFSP2Q13515 415 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 LRCH2Q5VUJ6 765 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 DEFB128Q7Z7B8 93 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 FAM177A1Q8N128 213 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-219ENST00000560483 DAGLBQ8NCG7 672 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 TNPO1Q92973 898 aaKnown RBP9.04□□□□□ -0.96
LRRC28-219ENST00000560483 ATP6V0A1Q93050 837 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 TMX3Q96JJ7 454 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 NAP1L4Q99733 375 aaKnown RBP9.04□□□□□ -0.96
LRRC28-219ENST00000560483 FTOQ9C0B1 505 aaKnown RBP eCLIP9.04□□□□□ -0.96
LRRC28-219ENST00000560483 SMARCAD1Q9H4L7 1026 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 TBC1D22BQ9NU19 505 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 ERAP1Q9NZ08 941 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-219ENST00000560483 TRIP12Q14669 1992 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-219ENST00000560483 SCN10AQ9Y5Y9 1956 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 GRIN2DO15399 1336 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 MYH9P35579 1960 aaKnown RBP9.03□□□□□ -0.96
LRRC28-219ENST00000560483 ZBBXA8MT70 800 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 BTBD18B2RXH4 712 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 KIAA0355O15063 1070 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 ZBTB24O43167 697 aaPredicted RBP9.03□□□□□ -0.96
LRRC28-219ENST00000560483 BAG4O95429 457 aaKnown RBP9.03□□□□□ -0.96
LRRC28-219ENST00000560483 F2P00734 622 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 MMP1P03956 469 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 PSAPP07602 524 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 ACRP10323 421 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 GJB2P29033 226 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 THPOP40225 353 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 STAT5BP51692 787 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 KRT76Q01546 638 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 PPFIA1Q13136 1202 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 ITGB3BPQ13352 177 aaPredicted RBP9.03□□□□□ -0.96
LRRC28-219ENST00000560483 PPIGQ13427 754 aaKnown RBP eCLIP9.03□□□□□ -0.96
LRRC28-219ENST00000560483 GDF6Q6KF10 455 aaPredicted RBP9.03□□□□□ -0.96
LRRC28-219ENST00000560483 PDXDC2PQ6P474 469 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 NIPA1Q7RTP0 329 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 HSCBQ8IWL3 235 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 KAT2BQ92831 832 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 GJA10Q969M2 543 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 SCLYQ96I15 445 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 RNPC3Q96LT9 517 aaKnown RBP9.03□□□□□ -0.96
LRRC28-219ENST00000560483 ZNF302Q9NR11 478 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 SETD4Q9NVD3 440 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 GTF2IRD1Q9UHL9 959 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 NOL7Q9UMY1 257 aaKnown RBP9.03□□□□□ -0.96
LRRC28-219ENST00000560483 TELO2Q9Y4R8 837 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 NFASCO94856 1347 aa9.03□□□□□ -0.96
LRRC28-219ENST00000560483 GSTTP1A0A1W2PQM5 241 aa9.02□□□□□ -0.97
LRRC28-219ENST00000560483 MSH4O15457 936 aa9.02□□□□□ -0.97
LRRC28-219ENST00000560483 DXOO77932 396 aaKnown RBP9.02□□□□□ -0.97
LRRC28-219ENST00000560483 CD4P01730 458 aa9.02□□□□□ -0.97
LRRC28-219ENST00000560483 CTSHP09668 335 aa9.02□□□□□ -0.97
LRRC28-219ENST00000560483 CSF2RAP15509 400 aa9.02□□□□□ -0.97
LRRC28-219ENST00000560483 ZNF200P98182 395 aaPredicted RBP9.02□□□□□ -0.97
LRRC28-219ENST00000560483 ST3GAL1Q11201 340 aa9.02□□□□□ -0.97
LRRC28-219ENST00000560483 HABP4Q5JVS0 413 aaKnown RBP9.02□□□□□ -0.97
LRRC28-219ENST00000560483 MFSD5Q6N075 450 aa9.02□□□□□ -0.97
LRRC28-219ENST00000560483 SWSAP1Q6NVH7 229 aa9.02□□□□□ -0.97
LRRC28-219ENST00000560483 MIER3Q7Z3K6 550 aa9.02□□□□□ -0.97
LRRC28-219ENST00000560483 RPUSD2Q8IZ73 545 aaKnown RBP9.02□□□□□ -0.97
LRRC28-219ENST00000560483 TDHQ8IZJ6 230 aa9.02□□□□□ -0.97
LRRC28-219ENST00000560483 SLC43A3Q8NBI5 491 aa9.02□□□□□ -0.97
LRRC28-219ENST00000560483 IL27Q8NEV9 243 aa9.02□□□□□ -0.97
LRRC28-219ENST00000560483 CCDC43Q96MW1 224 aaKnown RBP9.02□□□□□ -0.97
LRRC28-219ENST00000560483 C16orf70Q9BSU1 422 aa9.02□□□□□ -0.97
LRRC28-219ENST00000560483 MTIF3Q9H2K0 278 aaKnown RBP9.02□□□□□ -0.97
LRRC28-219ENST00000560483 TBX21Q9UL17 535 aa9.02□□□□□ -0.97
LRRC28-219ENST00000560483 UMODL1Q5DID0 1318 aa9.02□□□□□ -0.97
LRRC28-219ENST00000560483 TRIOBPQ9H2D6 2365 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 IGLV3-22A0A075B6J6 115 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 VPS37CA5D8V6 355 aaPredicted RBP9.01□□□□□ -0.97
LRRC28-219ENST00000560483 WDR64B1ANS9 1081 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 M0QZ92 97 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 TREHO43280 583 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 GCFC2P16383 781 aaKnown RBP9.01□□□□□ -0.97
LRRC28-219ENST00000560483 ITGB8P26012 769 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 CIITAP33076 1130 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 MCM7P33993 719 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 GMPRP36959 345 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 JAK3P52333 1124 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 GUCA2AQ02747 115 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 GRIK4Q16099 956 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 CALCRLQ16602 461 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 Q4G0T1 1027 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 NCAPH2Q6IBW4 605 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 ZNF746Q6NUN9 644 aaPredicted RBP9.01□□□□□ -0.97
LRRC28-219ENST00000560483 TRIM46Q7Z4K8 759 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 RSPH3Q86UC2 560 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 SMAP1Q8IYB5 467 aaPredicted RBP9.01□□□□□ -0.97
LRRC28-219ENST00000560483 CAGE1Q8TC20 777 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 GDF15Q99988 308 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 NOC4LQ9BVI4 516 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms