RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 GPR182O15218 404 aa15.91■□□□□ 0.14
TPM1-223ENST00000560445 DHX15O43143 795 aaKnown RBP15.91■□□□□ 0.14
TPM1-223ENST00000560445 NCK2O43639 380 aa15.91■□□□□ 0.14
TPM1-223ENST00000560445 ARHGEF15O94989 841 aa15.91■□□□□ 0.14
TPM1-223ENST00000560445 NONOQ15233 471 aaKnown RBP eCLIP15.91■□□□□ 0.14
TPM1-223ENST00000560445 EPC2Q52LR7 807 aa15.91■□□□□ 0.14
TPM1-223ENST00000560445 LRCH2Q5VUJ6 765 aa15.91■□□□□ 0.14
TPM1-223ENST00000560445 TMEM192Q8IY95 271 aa15.91■□□□□ 0.14
TPM1-223ENST00000560445 PPP2R3CQ969Q6 453 aa15.91■□□□□ 0.14
TPM1-223ENST00000560445 UHRF1Q96T88 793 aaPredicted RBP15.91■□□□□ 0.14
TPM1-223ENST00000560445 PLVAPQ9BX97 442 aa15.91■□□□□ 0.14
TPM1-223ENST00000560445 BRMS1Q9HCU9 246 aa15.91■□□□□ 0.14
TPM1-223ENST00000560445 PRDM6Q9NQX0 595 aa15.91■□□□□ 0.14
TPM1-223ENST00000560445 C1orf112Q9NSG2 853 aa15.91■□□□□ 0.14
TPM1-223ENST00000560445 LRFN2Q9ULH4 789 aa15.91■□□□□ 0.14
TPM1-223ENST00000560445 CCDC194A0A1B0GVG4 234 aa15.9■□□□□ 0.14
TPM1-223ENST00000560445 H3BNC9 293 aa15.9■□□□□ 0.14
TPM1-223ENST00000560445 LPXNO60711 386 aa15.9■□□□□ 0.14
TPM1-223ENST00000560445 DKC1O60832 514 aaKnown RBP eCLIP15.9■□□□□ 0.14
TPM1-223ENST00000560445 GCFC2P16383 781 aaKnown RBP15.9■□□□□ 0.14
TPM1-223ENST00000560445 CD52P31358 61 aa15.9■□□□□ 0.14
TPM1-223ENST00000560445 CTNNB1P35222 781 aa15.9■□□□□ 0.14
TPM1-223ENST00000560445 CDC42EP1Q00587 391 aa15.9■□□□□ 0.14
TPM1-223ENST00000560445 GPM6BQ13491 265 aa15.9■□□□□ 0.14
TPM1-223ENST00000560445 BTG3Q14201 252 aaPredicted RBP15.9■□□□□ 0.14
TPM1-223ENST00000560445 Q4G0T1 1027 aa15.9■□□□□ 0.14
TPM1-223ENST00000560445 CMTR2Q8IYT2 770 aaKnown RBP15.9■□□□□ 0.14
TPM1-223ENST00000560445 TBCKQ8TEA7 893 aa15.9■□□□□ 0.14
TPM1-223ENST00000560445 C17orf80Q9BSJ5 609 aa15.9■□□□□ 0.14
TPM1-223ENST00000560445 DISC1Q9NRI5 854 aa15.9■□□□□ 0.14
TPM1-223ENST00000560445 GABBR1Q9UBS5 961 aa15.9■□□□□ 0.14
TPM1-223ENST00000560445 PADI3Q9ULW8 664 aa15.9■□□□□ 0.14
TPM1-223ENST00000560445 FAM50BQ9Y247 325 aa15.9■□□□□ 0.14
TPM1-223ENST00000560445 TTC3P53804 2025 aa15.9■□□□□ 0.14
TPM1-223ENST00000560445 NLRC5Q86WI3 1866 aa15.89■□□□□ 0.13
TPM1-223ENST00000560445 DENND3A2RUS2 1198 aa15.89■□□□□ 0.13
TPM1-223ENST00000560445 C5orf67F2Z3F1 127 aa15.89■□□□□ 0.13
TPM1-223ENST00000560445 ENPP3O14638 875 aa15.89■□□□□ 0.13
TPM1-223ENST00000560445 RPS6KA5O75582 802 aa15.89■□□□□ 0.13
TPM1-223ENST00000560445 OATP04181 439 aa15.89■□□□□ 0.13
TPM1-223ENST00000560445 CRYBB1P53674 252 aaPredicted RBP15.89■□□□□ 0.13
TPM1-223ENST00000560445 STK3Q13188 491 aa15.89■□□□□ 0.13
TPM1-223ENST00000560445 PUS10Q3MIT2 529 aaKnown RBP15.89■□□□□ 0.13
TPM1-223ENST00000560445 NAALADL2Q58DX5 795 aa15.89■□□□□ 0.13
TPM1-223ENST00000560445 METTL13Q8N6R0 699 aa15.89■□□□□ 0.13
TPM1-223ENST00000560445 RASGRP4Q8TDF6 673 aa15.89■□□□□ 0.13
TPM1-223ENST00000560445 TRAPPC12Q8WVT3 735 aa15.89■□□□□ 0.13
TPM1-223ENST00000560445 SLC5A5Q92911 643 aa15.89■□□□□ 0.13
TPM1-223ENST00000560445 JPH2Q9BR39 696 aaPredicted RBP15.89■□□□□ 0.13
TPM1-223ENST00000560445 CYP3A7-CYP3A51PA0A087WV96 503 aa15.88■□□□□ 0.13
TPM1-223ENST00000560445 MSH4O15457 936 aa15.88■□□□□ 0.13
TPM1-223ENST00000560445 C22orf31O95567 290 aa15.88■□□□□ 0.13
TPM1-223ENST00000560445 CYP3A7P24462 503 aa15.88■□□□□ 0.13
TPM1-223ENST00000560445 TMEM62Q0P6H9 643 aa15.88■□□□□ 0.13
TPM1-223ENST00000560445 NFX1Q12986 1120 aaKnown RBP15.88■□□□□ 0.13
TPM1-223ENST00000560445 EXOC8Q8IYI6 725 aa15.88■□□□□ 0.13
TPM1-223ENST00000560445 LENG9Q96B70 501 aa15.88■□□□□ 0.13
TPM1-223ENST00000560445 AAASQ9NRG9 546 aa15.88■□□□□ 0.13
TPM1-223ENST00000560445 GINS2Q9Y248 185 aa15.88■□□□□ 0.13
TPM1-223ENST00000560445 HOXA2O43364 376 aa15.87■□□□□ 0.13
TPM1-223ENST00000560445 PFKFB2O60825 505 aa15.87■□□□□ 0.13
TPM1-223ENST00000560445 DGKIO75912 1065 aa15.87■□□□□ 0.13
TPM1-223ENST00000560445 BMPR1AP36894 532 aa15.87■□□□□ 0.13
TPM1-223ENST00000560445 DNM2P50570 870 aa15.87■□□□□ 0.13
TPM1-223ENST00000560445 PRKCEQ02156 737 aa15.87■□□□□ 0.13
TPM1-223ENST00000560445 TBC1D8BQ0IIM8 1120 aa15.87■□□□□ 0.13
TPM1-223ENST00000560445 CSPP1Q1MSJ5 1256 aa15.87■□□□□ 0.13
TPM1-223ENST00000560445 MIER3Q7Z3K6 550 aa15.87■□□□□ 0.13
TPM1-223ENST00000560445 KIAA0319LQ8IZA0 1049 aa15.87■□□□□ 0.13
TPM1-223ENST00000560445 BANK1Q8NDB2 785 aa15.87■□□□□ 0.13
TPM1-223ENST00000560445 RSPH1Q8WYR4 309 aa15.87■□□□□ 0.13
TPM1-223ENST00000560445 CLP1Q92989 425 aaKnown RBP15.87■□□□□ 0.13
TPM1-223ENST00000560445 FAM20AQ96MK3 541 aa15.87■□□□□ 0.13
TPM1-223ENST00000560445 SCLT1Q96NL6 688 aa15.87■□□□□ 0.13
TPM1-223ENST00000560445 NSUN3Q9H649 340 aaKnown RBP15.87■□□□□ 0.13
TPM1-223ENST00000560445 AGO3Q9H9G7 860 aaKnown RBP15.87■□□□□ 0.13
TPM1-223ENST00000560445 DDX25Q9UHL0 483 aaKnown RBP15.87■□□□□ 0.13
TPM1-223ENST00000560445 AKT3Q9Y243 479 aa15.87■□□□□ 0.13
TPM1-223ENST00000560445 PCDHB7Q9Y5E2 793 aa15.87■□□□□ 0.13
TPM1-223ENST00000560445 FSD2A1L4K1 749 aa15.86■□□□□ 0.13
TPM1-223ENST00000560445 CHMP2AO43633 222 aa15.86■□□□□ 0.13
TPM1-223ENST00000560445 MARCH6O60337 910 aa15.86■□□□□ 0.13
TPM1-223ENST00000560445 SARSP49591 514 aaKnown RBP15.86■□□□□ 0.13
TPM1-223ENST00000560445 TRIM29Q14134 588 aa15.86■□□□□ 0.13
TPM1-223ENST00000560445 XKR3Q5GH77 459 aa15.86■□□□□ 0.13
TPM1-223ENST00000560445 KRT40Q6A162 431 aa15.86■□□□□ 0.13
TPM1-223ENST00000560445 SLC24A5Q71RS6 500 aa15.86■□□□□ 0.13
TPM1-223ENST00000560445 NEK8Q86SG6 692 aa15.86■□□□□ 0.13
TPM1-223ENST00000560445 P2RX5Q93086 422 aa15.86■□□□□ 0.13
TPM1-223ENST00000560445 UBE2ZQ9H832 354 aaPredicted RBP15.86■□□□□ 0.13
TPM1-223ENST00000560445 PPME1Q9Y570 386 aa15.86■□□□□ 0.13
TPM1-223ENST00000560445 CARNS1A5YM72 827 aa15.85■□□□□ 0.13
TPM1-223ENST00000560445 ZBTB42B2RXF5 422 aa15.85■□□□□ 0.13
TPM1-223ENST00000560445 TBX3O15119 743 aa15.85■□□□□ 0.13
TPM1-223ENST00000560445 PPFIA3O75145 1194 aa15.85■□□□□ 0.13
TPM1-223ENST00000560445 BMP1P13497 986 aa15.85■□□□□ 0.13
TPM1-223ENST00000560445 SCRN1Q12765 414 aa15.85■□□□□ 0.13
TPM1-223ENST00000560445 PPP4R3AQ6IN85 833 aa15.85■□□□□ 0.13
TPM1-223ENST00000560445 ZNF689Q96CS4 500 aaPredicted RBP15.85■□□□□ 0.13
TPM1-223ENST00000560445 MBOAT7Q96N66 472 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms