RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 DTX3Q8N9I9 347 aa7.47□□□□□ -1.21
MARK3-220ENST00000560417 IGDCC4Q8TDY8 1250 aa7.47□□□□□ -1.21
MARK3-220ENST00000560417 TSR2Q969E8 191 aaKnown RBP7.47□□□□□ -1.21
MARK3-220ENST00000560417 AASDHPPTQ9NRN7 309 aa7.47□□□□□ -1.21
MARK3-220ENST00000560417 CCM2LQ9NUG4 571 aaPredicted RBP7.47□□□□□ -1.21
MARK3-220ENST00000560417 ZIM2Q9NZV7 527 aa7.47□□□□□ -1.21
MARK3-220ENST00000560417 ARHGAP28Q9P2N2 729 aa7.47□□□□□ -1.21
MARK3-220ENST00000560417 TMPRSS11EQ9UL52 423 aa7.47□□□□□ -1.21
MARK3-220ENST00000560417 PCDHGA9Q9Y5G4 932 aaKnown RBP7.47□□□□□ -1.21
MARK3-220ENST00000560417 PCDHGA8Q9Y5G5 932 aa7.47□□□□□ -1.21
MARK3-220ENST00000560417 PCDHGA7Q9Y5G6 932 aa7.47□□□□□ -1.21
MARK3-220ENST00000560417 PCDHGA6Q9Y5G7 932 aa7.47□□□□□ -1.21
MARK3-220ENST00000560417 PCDHGA3Q9Y5H0 932 aa7.47□□□□□ -1.21
MARK3-220ENST00000560417 PCDHGA2Q9Y5H1 932 aa7.47□□□□□ -1.21
MARK3-220ENST00000560417 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.47□□□□□ -1.21
MARK3-220ENST00000560417 PRPF6O94906 941 aaKnown RBP7.46□□□□□ -1.22
MARK3-220ENST00000560417 ENPP1P22413 925 aa7.46□□□□□ -1.22
MARK3-220ENST00000560417 IGFBP6P24592 240 aaPredicted RBP7.46□□□□□ -1.22
MARK3-220ENST00000560417 CDR1P51861 262 aa7.46□□□□□ -1.22
MARK3-220ENST00000560417 PPP2R5AQ15172 486 aa7.46□□□□□ -1.22
MARK3-220ENST00000560417 LRRC41Q15345 812 aa7.46□□□□□ -1.22
MARK3-220ENST00000560417 PGM2L1Q6PCE3 622 aa7.46□□□□□ -1.22
MARK3-220ENST00000560417 MPZL3Q6UWV2 235 aa7.46□□□□□ -1.22
MARK3-220ENST00000560417 TUBGCP5Q96RT8 1024 aa7.46□□□□□ -1.22
MARK3-220ENST00000560417 MYL10Q9BUA6 226 aa7.46□□□□□ -1.22
MARK3-220ENST00000560417 RHOBTB2Q9BYZ6 727 aa7.46□□□□□ -1.22
MARK3-220ENST00000560417 MCOLN1Q9GZU1 580 aa7.46□□□□□ -1.22
MARK3-220ENST00000560417 WNT8AQ9H1J5 351 aa7.46□□□□□ -1.22
MARK3-220ENST00000560417 INCENPQ9NQS7 918 aa7.46□□□□□ -1.22
MARK3-220ENST00000560417 GALNT8Q9NY28 637 aa7.46□□□□□ -1.22
MARK3-220ENST00000560417 TEX51A0A1B0GUA7 166 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 PRSS38A1L453 326 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 RFPL1O75677 317 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 SCGB1D2O95969 90 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 SLC6A3Q01959 620 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 ODF1Q14990 250 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 TARBP2Q15633 366 aaKnown RBP7.45□□□□□ -1.22
MARK3-220ENST00000560417 TMEM240Q5SV17 173 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 VASNQ6EMK4 673 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 KIAA1841Q6NSI8 718 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 UNQ6494/PRO21346Q6UXR6 183 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 PRR23BQ6ZRT6 265 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 KCNK18Q7Z418 384 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 B3GNT8Q7Z7M8 397 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 NBPF11Q86T75 865 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 DDX11Q96FC9 970 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 SYT3Q9BQG1 590 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 ANO3Q9BYT9 981 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 EPB41L4BQ9H329 900 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 DLL4Q9NR61 685 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 SIRT5Q9NXA8 310 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 KCNG1Q9UIX4 513 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 FAN1Q9Y2M0 1017 aa7.45□□□□□ -1.22
MARK3-220ENST00000560417 IL18BPO95998 194 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 RGS3P49796 1198 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 ROM1Q03395 351 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 STILQ15468 1287 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 SKIDA1Q1XH10 827 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 CT83Q5H943 113 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 PITRM1Q5JRX3 1037 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 CCDC181Q5TID7 509 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 SLFN12LQ6IEE8 588 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 TIGD7Q6NT04 549 aaPredicted RBP7.44□□□□□ -1.22
MARK3-220ENST00000560417 LYSMD2Q8IV50 215 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 IGDCC3Q8IVU1 814 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 Q8N3U1 123 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 CPA6Q8N4T0 437 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 SMARCC2Q8TAQ2 1214 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 TGFBRAP1Q8WUH2 860 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 TMEM209Q96SK2 561 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 DIRC2Q96SL1 478 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 NSUN3Q9H649 340 aaKnown RBP7.44□□□□□ -1.22
MARK3-220ENST00000560417 ZNF277Q9NRM2 450 aaPredicted RBP7.44□□□□□ -1.22
MARK3-220ENST00000560417 MKS1Q9NXB0 559 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 FAM53CQ9NYF3 392 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 LUC7L2Q9Y383 392 aaKnown RBP7.44□□□□□ -1.22
MARK3-220ENST00000560417 NUMBLQ9Y6R0 609 aa7.44□□□□□ -1.22
MARK3-220ENST00000560417 MAFO75444 373 aaPredicted RBP7.43□□□□□ -1.22
MARK3-220ENST00000560417 PFKMP08237 780 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 CLEC2LP0C7M8 214 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 CYP2C8P10632 490 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 ECE1P42892 770 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 RECQLP46063 649 aaPredicted RBP7.43□□□□□ -1.22
MARK3-220ENST00000560417 MTNR1BP49286 362 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 NCKAP1LP55160 1127 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 ITGA1P56199 1179 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 ADAM9Q13443 819 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 HSP90AB2PQ58FF8 381 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 PRAMEF9Q5VWM5 478 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 LRSAM1Q6UWE0 723 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 TMC5Q6UXY8 1006 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 SLC41A1Q8IVJ1 513 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 CALML6Q8TD86 181 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 MZB1Q8WU39 189 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 EAF2Q96CJ1 260 aaPredicted RBP7.43□□□□□ -1.22
MARK3-220ENST00000560417 BTBD2Q9BX70 525 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 KCNK12Q9HB15 430 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 PCDH18Q9HCL0 1135 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 GCM1Q9NP62 436 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 DCP1AQ9NPI6 582 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms