RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 BHMT2Q9H2M3 363 aa12.92□□□□□ -0.34
TM2D3-208ENST00000559891 HMX1Q9NP08 348 aaPredicted RBP12.92□□□□□ -0.34
TM2D3-208ENST00000559891 XPNPEP3Q9NQH7 507 aa12.92□□□□□ -0.34
TM2D3-208ENST00000559891 DDX20Q9UHI6 824 aaKnown RBP12.92□□□□□ -0.34
TM2D3-208ENST00000559891 IGSF9BQ9UPX0 1349 aa12.92□□□□□ -0.34
TM2D3-208ENST00000559891 CAVIN2O95810 425 aa12.91□□□□□ -0.34
TM2D3-208ENST00000559891 RARBP10826 455 aa12.91□□□□□ -0.34
TM2D3-208ENST00000559891 TXLNAP40222 546 aa12.91□□□□□ -0.34
TM2D3-208ENST00000559891 PSMC5P62195 406 aa12.91□□□□□ -0.34
TM2D3-208ENST00000559891 PRKCEQ02156 737 aa12.91□□□□□ -0.34
TM2D3-208ENST00000559891 CKAP2LQ8IYA6 745 aa12.91□□□□□ -0.34
TM2D3-208ENST00000559891 TRAPPC12Q8WVT3 735 aa12.91□□□□□ -0.34
TM2D3-208ENST00000559891 TSC1Q92574 1164 aa12.91□□□□□ -0.34
TM2D3-208ENST00000559891 RAD54LQ92698 747 aa12.91□□□□□ -0.34
TM2D3-208ENST00000559891 KAT2BQ92831 832 aa12.91□□□□□ -0.34
TM2D3-208ENST00000559891 PAGE5Q96GU1 130 aa12.91□□□□□ -0.34
TM2D3-208ENST00000559891 TUFT1Q9NNX1 390 aa12.91□□□□□ -0.34
TM2D3-208ENST00000559891 NRBP1Q9UHY1 535 aa12.91□□□□□ -0.34
TM2D3-208ENST00000559891 NKRFO15226 690 aaKnown RBP eCLIP12.91□□□□□ -0.34
TM2D3-208ENST00000559891 YWHABP31946 246 aaKnown RBP12.91□□□□□ -0.34
TM2D3-208ENST00000559891 ZNF75DP51815 510 aa12.91□□□□□ -0.34
TM2D3-208ENST00000559891 SOX10P56693 466 aa12.91□□□□□ -0.34
TM2D3-208ENST00000559891 MDM2Q00987 491 aaPredicted RBP12.91□□□□□ -0.34
TM2D3-208ENST00000559891 FSCN1Q16658 493 aaKnown RBP12.91□□□□□ -0.34
TM2D3-208ENST00000559891 GNASQ5JWF2 1037 aa12.91□□□□□ -0.34
TM2D3-208ENST00000559891 IQUBQ8NA54 791 aa12.91□□□□□ -0.34
TM2D3-208ENST00000559891 CNNM3Q8NE01 707 aa12.91□□□□□ -0.34
TM2D3-208ENST00000559891 ZSWIM4Q9H7M6 989 aa12.91□□□□□ -0.34
TM2D3-208ENST00000559891 CTIFO43310 598 aaKnown RBP12.9□□□□□ -0.34
TM2D3-208ENST00000559891 LGR5O75473 907 aa12.9□□□□□ -0.34
TM2D3-208ENST00000559891 MYL3P08590 195 aa12.9□□□□□ -0.34
TM2D3-208ENST00000559891 SLFN14P0C7P3 912 aa12.9□□□□□ -0.34
TM2D3-208ENST00000559891 PLA2G4BP0C869 781 aa12.9□□□□□ -0.34
TM2D3-208ENST00000559891 GJA9P57773 515 aa12.9□□□□□ -0.34
TM2D3-208ENST00000559891 CUL4BQ13620 913 aa12.9□□□□□ -0.34
TM2D3-208ENST00000559891 HIC1Q14526 733 aa12.9□□□□□ -0.34
TM2D3-208ENST00000559891 ARSHQ5FYA8 562 aa12.9□□□□□ -0.34
TM2D3-208ENST00000559891 ISM2Q6H9L7 571 aa12.9□□□□□ -0.34
TM2D3-208ENST00000559891 CXCL17Q6UXB2 119 aa12.9□□□□□ -0.34
TM2D3-208ENST00000559891 MAEAQ7L5Y9 396 aa12.9□□□□□ -0.34
TM2D3-208ENST00000559891 DYMQ7RTS9 669 aa12.9□□□□□ -0.34
TM2D3-208ENST00000559891 LARP4BQ92615 738 aaKnown RBP12.9□□□□□ -0.34
TM2D3-208ENST00000559891 DEFB118Q96PH6 123 aa12.9□□□□□ -0.34
TM2D3-208ENST00000559891 RUSC1Q9BVN2 902 aa12.9□□□□□ -0.34
TM2D3-208ENST00000559891 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.9□□□□□ -0.34
TM2D3-208ENST00000559891 AP5M1Q9H0R1 490 aa12.9□□□□□ -0.34
TM2D3-208ENST00000559891 MYMKA6NI61 221 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 RIOK3O14730 519 aaKnown RBP12.89□□□□□ -0.35
TM2D3-208ENST00000559891 KINO60870 393 aaKnown RBP12.89□□□□□ -0.35
TM2D3-208ENST00000559891 PPFIA4O75335 1185 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 HOXD8P13378 290 aaPredicted RBP12.89□□□□□ -0.35
TM2D3-208ENST00000559891 CCL5P13501 91 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 SLC12A3P55017 1021 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 PLCB4Q15147 1175 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 FBXO46Q6PJ61 603 aaPredicted RBP12.89□□□□□ -0.35
TM2D3-208ENST00000559891 SH3RF1Q7Z6J0 888 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 C4orf19Q8IY42 314 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 RDM1Q8NG50 284 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 RNF208Q9H0X6 261 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 KBTBD4Q9NVX7 518 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 SEPT9Q9UHD8 586 aaPredicted RBP12.89□□□□□ -0.35
TM2D3-208ENST00000559891 KDM3AQ9Y4C1 1321 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 KIAA0100Q14667 2235 aaKnown RBP12.89□□□□□ -0.35
TM2D3-208ENST00000559891 ZBTB42B2RXF5 422 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 CDC25BP30305 580 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 RARRES1P49788 294 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 PURAQ00577 322 aaKnown RBP12.89□□□□□ -0.35
TM2D3-208ENST00000559891 KCNA10Q16322 511 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 DGKDQ16760 1214 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 MTERF2Q49AM1 385 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 CCSAPQ6IQ19 270 aaPredicted RBP12.89□□□□□ -0.35
TM2D3-208ENST00000559891 CCDC186Q7Z3E2 898 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 AFAP1L1Q8TED9 768 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 UPF3AQ9H1J1 476 aaKnown RBP12.89□□□□□ -0.35
TM2D3-208ENST00000559891 AZI2Q9H6S1 392 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 PRDM4Q9UKN5 801 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 DNM3Q9UQ16 869 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 EMSYQ7Z589 1322 aa12.89□□□□□ -0.35
TM2D3-208ENST00000559891 SFI1A8K8P3 1242 aa12.88□□□□□ -0.35
TM2D3-208ENST00000559891 RSPH10B2B2RC85 870 aa12.88□□□□□ -0.35
TM2D3-208ENST00000559891 H3BRB1 525 aa12.88□□□□□ -0.35
TM2D3-208ENST00000559891 OATP04181 439 aa12.88□□□□□ -0.35
TM2D3-208ENST00000559891 RSPH10BP0C881 870 aa12.88□□□□□ -0.35
TM2D3-208ENST00000559891 CYP11B2P19099 503 aa12.88□□□□□ -0.35
TM2D3-208ENST00000559891 ZNF165P49910 485 aa12.88□□□□□ -0.35
TM2D3-208ENST00000559891 XKR9Q5GH70 373 aa12.88□□□□□ -0.35
TM2D3-208ENST00000559891 CEP57L1Q8IYX8 460 aa12.88□□□□□ -0.35
TM2D3-208ENST00000559891 KLHDC9Q8NEP7 349 aa12.88□□□□□ -0.35
TM2D3-208ENST00000559891 ANKRD7Q92527 254 aa12.88□□□□□ -0.35
TM2D3-208ENST00000559891 ATP6V0A1Q93050 837 aa12.88□□□□□ -0.35
TM2D3-208ENST00000559891 HPS3Q969F9 1004 aa12.88□□□□□ -0.35
TM2D3-208ENST00000559891 ZNF333Q96JL9 665 aa12.88□□□□□ -0.35
TM2D3-208ENST00000559891 NACC1Q96RE7 527 aa12.88□□□□□ -0.35
TM2D3-208ENST00000559891 CEP89Q96ST8 783 aa12.88□□□□□ -0.35
TM2D3-208ENST00000559891 NT5C3AQ9H0P0 336 aa12.88□□□□□ -0.35
TM2D3-208ENST00000559891 TUT1Q9H6E5 874 aaKnown RBP12.88□□□□□ -0.35
TM2D3-208ENST00000559891 PAK6Q9NQU5 681 aaPredicted RBP12.88□□□□□ -0.35
TM2D3-208ENST00000559891 Q9Y3F1 56 aa12.88□□□□□ -0.35
TM2D3-208ENST00000559891 FRMPD3Q5JV73 1810 aa12.88□□□□□ -0.35
TM2D3-208ENST00000559891 LYPLA2O95372 231 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms