RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 SETQ01105 290 aaPredicted RBP12.14□□□□□ -0.47
SPG11-217ENST00000559511 MTMR2Q13614 643 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 DCAF15Q66K64 600 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 ANKRD13CQ8N6S4 541 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 DRC1Q96MC2 740 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 UBXN6Q9BZV1 441 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 JADE2Q9NQC1 790 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 FRMPD4Q14CM0 1322 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 IPO5O00410 1097 aaKnown RBP12.14□□□□□ -0.47
SPG11-217ENST00000559511 FAM13AO94988 1023 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 AFPP02771 609 aaKnown RBP12.14□□□□□ -0.47
SPG11-217ENST00000559511 XRCC5P13010 732 aaKnown RBP12.14□□□□□ -0.47
SPG11-217ENST00000559511 ITGB5P18084 799 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 SLC9A1P19634 815 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 ARID5AQ03989 594 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 RAPGEF1Q13905 1077 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 ZC2HC1CQ53FD0 456 aaPredicted RBP12.14□□□□□ -0.47
SPG11-217ENST00000559511 DCAF17Q5H9S7 520 aaPredicted RBP12.14□□□□□ -0.47
SPG11-217ENST00000559511 APOBEC3FQ8IUX4 373 aaKnown RBP12.14□□□□□ -0.47
SPG11-217ENST00000559511 KSR1Q8IVT5 923 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 MYCT1Q8N699 235 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 FAM133AQ8N9E0 248 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 IL31RAQ8NI17 732 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 CLEC4DQ8WXI8 215 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 HOOK2Q96ED9 719 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 FIZ1Q96SL8 496 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 WDR11Q9BZH6 1224 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 SUGCTQ9HAC7 445 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 ABCB6Q9NP58 842 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 RNF216Q9NWF9 866 aaPredicted RBP12.14□□□□□ -0.47
SPG11-217ENST00000559511 SNX12Q9UMY4 172 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 FZD1Q9UP38 647 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 JRKLQ9Y4A0 524 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 PTPRFP10586 1907 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 WDR81Q562E7 1941 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 VCAM1P19320 739 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 SCYL3Q8IZE3 742 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 GPC2Q8N158 579 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 BANK1Q8NDB2 785 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 ZKSCAN4Q969J2 545 aaPredicted RBP12.13□□□□□ -0.47
SPG11-217ENST00000559511 MXRA8Q9BRK3 442 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 LXNQ9BS40 222 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 TEKT3Q9BXF9 490 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 ZMYND15Q9H091 742 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 PARVGQ9HBI0 331 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 AIPL1Q9NZN9 384 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 PKD2L1Q9P0L9 805 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 RPTORQ8N122 1335 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 KIAA1217Q5T5P2 1943 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 DDX39AO00148 427 aaKnown RBP12.13□□□□□ -0.47
SPG11-217ENST00000559511 MAP2K7O14733 419 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 EIF3DO15371 548 aaKnown RBP eCLIP12.13□□□□□ -0.47
SPG11-217ENST00000559511 SLC16A3O15427 465 aaKnown RBP12.13□□□□□ -0.47
SPG11-217ENST00000559511 EPB41P11171 864 aaKnown RBP12.13□□□□□ -0.47
SPG11-217ENST00000559511 LMNB1P20700 586 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 RPL13P26373 211 aaKnown RBP12.13□□□□□ -0.47
SPG11-217ENST00000559511 PON1P27169 355 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 ZNF131P52739 623 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 HIRAP54198 1017 aaPredicted RBP12.13□□□□□ -0.47
SPG11-217ENST00000559511 USP14P54578 494 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 CKAP4Q07065 602 aaKnown RBP12.13□□□□□ -0.47
SPG11-217ENST00000559511 SPP2Q13103 211 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 COG2Q14746 738 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 EPHA7Q15375 998 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 TERF2Q15554 542 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 ENOX2Q16206 610 aaKnown RBP12.13□□□□□ -0.47
SPG11-217ENST00000559511 UTP14CQ5TAP6 766 aaKnown RBP12.13□□□□□ -0.47
SPG11-217ENST00000559511 CREG2Q8IUH2 290 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 COG1Q8WTW3 980 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 SLC35C1Q96A29 364 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 NACC1Q96RE7 527 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 WRNIP1Q96S55 665 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 SLC38A10Q9HBR0 1119 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 GGA3Q9NZ52 723 aa12.13□□□□□ -0.47
SPG11-217ENST00000559511 SSC5DA1L4H1 1573 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 A0A087X0T9 212 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 BUB1O43683 1085 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 FLOT1O75955 427 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 FAM228BP0C875 321 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 UCHL3P15374 230 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 MUTP22033 750 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 ASIC2Q16515 512 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 SLC18A3Q16572 532 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 EXOC3L4Q17RC7 722 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 KLHDC7AQ5VTJ3 777 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 CPXCR1Q8N123 301 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 CAGE1Q8TC20 777 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 BORCS6Q96GS4 357 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 RPAP3Q9H6T3 665 aaPredicted RBP12.12□□□□□ -0.47
SPG11-217ENST00000559511 RAVER2Q9HCJ3 691 aaKnown RBP12.12□□□□□ -0.47
SPG11-217ENST00000559511 PLCB1Q9NQ66 1216 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 KCNH7Q9NS40 1196 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 PPP1R9AQ9ULJ8 1098 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 PCDHB13Q9Y5F0 798 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 OTOFQ9HC10 1997 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 PAPPA2Q9BXP8 1791 aa12.12□□□□□ -0.47
SPG11-217ENST00000559511 NCK2O43639 380 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 PTPRAP18433 802 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 GHRHRQ02643 423 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 C2orf54Q08AI8 447 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms