RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 TM4SF1P30408 202 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 HOXA10P31260 410 aaPredicted RBP8.1□□□□□ -1.11
MARK3-212ENST00000558223 SYKP43405 635 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 SNW1Q13573 536 aaKnown RBP8.1□□□□□ -1.11
MARK3-212ENST00000558223 DHCR24Q15392 516 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 SEC23AQ15436 765 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 CAMK4Q16566 473 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 CRY2Q49AN0 593 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 MINDY4Q4G0A6 757 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 ANO6Q4KMQ2 910 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 C4orf17Q53FE4 359 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 RRP12Q5JTH9 1297 aaKnown RBP8.1□□□□□ -1.11
MARK3-212ENST00000558223 FAM209AQ5JX71 171 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 LRRC69Q6ZNQ3 347 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 ZNF354CQ86Y25 554 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 MEIOBQ8N635 442 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 CNTD1Q8N815 330 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 TRIML1Q8N9V2 468 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 KDF1Q8NAX2 398 aaPredicted RBP8.1□□□□□ -1.11
MARK3-212ENST00000558223 PIBF1Q8WXW3 757 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 TIFAQ96CG3 184 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 TRERF1Q96PN7 1200 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 OSMRQ99650 979 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 ELAC2Q9BQ52 826 aaKnown RBP8.1□□□□□ -1.11
MARK3-212ENST00000558223 SLC26A6Q9BXS9 759 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 CBX8Q9HC52 389 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 SH3GLB2Q9NR46 395 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 TCP11L1Q9NUJ3 509 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 ZNF69Q9UC07 566 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 GTF2A1LQ9UNN4 478 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 CYP8B1Q9UNU6 501 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 TNKSO95271 1327 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 TRBV23-1A0A0A0MS06 115 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 A0A0G2JLW4 131 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 KLRG2A4D1S0 409 aaPredicted RBP8.09□□□□□ -1.11
MARK3-212ENST00000558223 IKBKBO14920 756 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 PRKAB2O43741 272 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 GRIN3BO60391 1043 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 ZNF202O95125 648 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 ATE1O95260 518 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 ITPKAP23677 461 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 SMARCA1P28370 1054 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 GSDMDP57764 484 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 NLRP12P59046 1061 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 TMPRSS15P98073 1019 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 MECOMQ03112 1051 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 CEBPZQ03701 1054 aaKnown RBP8.09□□□□□ -1.11
MARK3-212ENST00000558223 PPP2R3AQ06190 1150 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 NFIXQ14938 502 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 SYDE2Q5VT97 1194 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 CTR9Q6PD62 1173 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 NCAPG2Q86XI2 1143 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 MIGA1Q8NAN2 632 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 USP7Q93009 1102 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 FERMT2Q96AC1 680 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 HERPUD2Q9BSE4 406 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 GTPBP4Q9BZE4 634 aaKnown RBP8.09□□□□□ -1.11
MARK3-212ENST00000558223 TRIM5Q9C035 493 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 DCP1AQ9NPI6 582 aaPredicted RBP8.09□□□□□ -1.11
MARK3-212ENST00000558223 C11orf16Q9NQ32 467 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 IMPACTQ9P2X3 320 aa8.09□□□□□ -1.11
MARK3-212ENST00000558223 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.09□□□□□ -1.11
MARK3-212ENST00000558223 MYH14Q7Z406 1995 aaKnown RBP8.09□□□□□ -1.11
MARK3-212ENST00000558223 LAMA4Q16363 1823 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 AFF2P51816 1311 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 TRAV20A0A0B4J274 112 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 GABRDO14764 452 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 CBFA2T2O43439 604 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 TIMM44O43615 452 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 RANBP6O60518 1105 aaKnown RBP8.08□□□□□ -1.12
MARK3-212ENST00000558223 FBXO21O94952 628 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 BMP2P12643 396 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 IL1R1P14778 569 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 KRT2P35908 639 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 GRIA4P48058 902 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 GUCY1B3Q02153 619 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 CHAF1AQ13111 956 aaPredicted RBP8.08□□□□□ -1.12
MARK3-212ENST00000558223 LRRC14Q15048 493 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 PTPAQ15257 358 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 COBLL1Q53SF7 1204 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 RPS26P11Q5JNZ5 115 aaPredicted RBP8.08□□□□□ -1.12
MARK3-212ENST00000558223 RESP18Q5W5W9 173 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 KIAA1211LQ6NV74 962 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 OLFM4Q6UX06 510 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 NBPF11Q86T75 865 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 PLA2G4DQ86XP0 818 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 DIS3L2Q8IYB7 885 aaKnown RBP8.08□□□□□ -1.12
MARK3-212ENST00000558223 ZNF444Q8N0Y2 327 aaPredicted RBP8.08□□□□□ -1.12
MARK3-212ENST00000558223 STK11IPQ8N1F8 1099 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 LINC00528Q8N1L1 170 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 VPS37AQ8NEZ2 397 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 SCLT1Q96NL6 688 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 TTC1Q99614 292 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 ZKSCAN3Q9BRR0 538 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 TRIM8Q9BZR9 551 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 TMEM39AQ9NV64 488 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 LUZP4Q9P127 313 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 SRP68Q9UHB9 627 aaKnown RBP8.08□□□□□ -1.12
MARK3-212ENST00000558223 GGA1Q9UJY5 639 aa8.08□□□□□ -1.12
MARK3-212ENST00000558223 HPSEQ9Y251 543 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms