RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 NKX3-2P78367 333 aa2.34□□□□□ -2.04
HIF1A-212ENST00000557538 PIN1Q13526 163 aaPredicted RBP2.34□□□□□ -2.04
HIF1A-212ENST00000557538 GTF2H3Q13889 308 aa2.34□□□□□ -2.04
HIF1A-212ENST00000557538 MYBPC3Q14896 1274 aa2.34□□□□□ -2.04
HIF1A-212ENST00000557538 TTF1Q15361 905 aaPredicted RBP2.34□□□□□ -2.04
HIF1A-212ENST00000557538 TRIM68Q6AZZ1 485 aa2.34□□□□□ -2.04
HIF1A-212ENST00000557538 TIGD7Q6NT04 549 aaPredicted RBP2.34□□□□□ -2.04
HIF1A-212ENST00000557538 SAPCD2Q86UD0 394 aa2.34□□□□□ -2.04
HIF1A-212ENST00000557538 PRR18Q8N4B5 295 aa2.34□□□□□ -2.04
HIF1A-212ENST00000557538 CALML6Q8TD86 181 aa2.34□□□□□ -2.04
HIF1A-212ENST00000557538 USP33Q8TEY7 942 aa2.34□□□□□ -2.04
HIF1A-212ENST00000557538 MZB1Q8WU39 189 aa2.34□□□□□ -2.04
HIF1A-212ENST00000557538 FAM168AQ92567 244 aa2.34□□□□□ -2.04
HIF1A-212ENST00000557538 LPPQ93052 612 aa2.34□□□□□ -2.04
HIF1A-212ENST00000557538 AHCYL2Q96HN2 611 aaKnown RBP2.34□□□□□ -2.04
HIF1A-212ENST00000557538 AJUBAQ96IF1 538 aa2.34□□□□□ -2.04
HIF1A-212ENST00000557538 CD320Q9NPF0 282 aa2.34□□□□□ -2.04
HIF1A-212ENST00000557538 MYOCOSA0A1B0GUC4 107 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 UBA6A0AVT1 1052 aaPredicted RBP2.33□□□□□ -2.04
HIF1A-212ENST00000557538 ELL2O00472 640 aaPredicted RBP2.33□□□□□ -2.04
HIF1A-212ENST00000557538 SCDO00767 359 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 KNG1P01042 644 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 ATF2P15336 505 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 AGXTP21549 392 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 APEX1P27695 318 aaKnown RBP2.33□□□□□ -2.04
HIF1A-212ENST00000557538 KIF11P52732 1056 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 SESN2P58004 480 aaPredicted RBP2.33□□□□□ -2.04
HIF1A-212ENST00000557538 ROM1Q03395 351 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 NFYCQ13952 458 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 DDB1Q16531 1140 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 SKOR2Q2VWA4 1001 aaPredicted RBP2.33□□□□□ -2.04
HIF1A-212ENST00000557538 FAM102BQ5T8I3 360 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 CCSAPQ6IQ19 270 aaPredicted RBP2.33□□□□□ -2.04
HIF1A-212ENST00000557538 LIPIQ6XZB0 460 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 KYQ8NBH2 561 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 ALG3Q92685 438 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 NKD2Q969F2 451 aaPredicted RBP2.33□□□□□ -2.04
HIF1A-212ENST00000557538 OR10A5Q9H207 317 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 PCIF1Q9H4Z3 704 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 INCENPQ9NQS7 918 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.33□□□□□ -2.04
HIF1A-212ENST00000557538 KCMF1Q9P0J7 381 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 TRHDEQ9UKU6 1024 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 ANKRD6Q9Y2G4 727 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 GIT1Q9Y2X7 761 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 C9orf118A6NHY6 69 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 KIF3BO15066 747 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 TSPAN6O43657 245 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 ADAM9Q13443 819 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 EIF4HQ15056 248 aaKnown RBP2.33□□□□□ -2.04
HIF1A-212ENST00000557538 FAM26FQ5R3K3 315 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 CPA6Q8N4T0 437 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 CD244Q9BZW8 370 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 EPB41L4BQ9H329 900 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 TOMM22Q9NS69 142 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 FAM30AQ9NZY2 134 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 NOC2LQ9Y3T9 749 aaKnown RBP2.33□□□□□ -2.04
HIF1A-212ENST00000557538 EID1Q9Y6B2 187 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 WASHC2AQ641Q2 1341 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 KRTAP4-8A0A0G2JLE6 195 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.33□□□□□ -2.04
HIF1A-212ENST00000557538 A0A1W2PQJ5 194 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 PCDHGA12O60330 932 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 KRT1P04264 644 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 FOXO4P98177 505 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 MUM1Q2TAK8 710 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 MCTP1Q6DN14 999 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 CYB5RLQ6IPT4 315 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 UBR7Q8N806 425 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 RUNDC1Q96C34 613 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 C11orf84Q9BUA3 381 aaPredicted RBP2.33□□□□□ -2.04
HIF1A-212ENST00000557538 EPB41L4AQ9HCS5 686 aaPredicted RBP2.33□□□□□ -2.04
HIF1A-212ENST00000557538 JADE2Q9NQC1 790 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 H2AFY2Q9P0M6 372 aaPredicted RBP2.33□□□□□ -2.04
HIF1A-212ENST00000557538 PCDHGA9Q9Y5G4 932 aaKnown RBP2.33□□□□□ -2.04
HIF1A-212ENST00000557538 PCDHGA8Q9Y5G5 932 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 PCDHGA7Q9Y5G6 932 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 PCDHGA6Q9Y5G7 932 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 PCDHGA3Q9Y5H0 932 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 PCDHGA2Q9Y5H1 932 aa2.33□□□□□ -2.04
HIF1A-212ENST00000557538 MYPNQ86TC9 1320 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 OPHN1O60890 802 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 PARNO95453 639 aaKnown RBP2.32□□□□□ -2.04
HIF1A-212ENST00000557538 IL18BPO95998 194 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 LTFP02788 710 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 ZNF28P17035 718 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 KRT15P19012 456 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 SLC9A1P19634 815 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 IRAK1P51617 712 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 ITKQ08881 620 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 GBX1Q14549 363 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 MAN2A1Q16706 1144 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 ODR4Q5SWX8 454 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 ADGRF1Q5T601 910 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 VASNQ6EMK4 673 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 BCL6BQ8N143 479 aaPredicted RBP2.32□□□□□ -2.04
HIF1A-212ENST00000557538 HOXB13Q92826 284 aaPredicted RBP2.32□□□□□ -2.04
HIF1A-212ENST00000557538 RPGRQ92834 1020 aaKnown RBP2.32□□□□□ -2.04
HIF1A-212ENST00000557538 FATE1Q969F0 183 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 ZNF496Q96IT1 587 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms