RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 ONECUT3O60422 494 aaPredicted RBP19.38■□□□□ 0.69
XRCC3-218ENST00000557439 HSF2BPO75031 334 aa19.38■□□□□ 0.69
XRCC3-218ENST00000557439 IRAK1P51617 712 aa19.38■□□□□ 0.69
XRCC3-218ENST00000557439 PLS1Q14651 629 aa19.38■□□□□ 0.69
XRCC3-218ENST00000557439 PRMT6Q96LA8 375 aaPredicted RBP19.38■□□□□ 0.69
XRCC3-218ENST00000557439 SH3GL2Q99962 352 aa19.38■□□□□ 0.69
XRCC3-218ENST00000557439 GLT8D2Q9H1C3 349 aa19.38■□□□□ 0.69
XRCC3-218ENST00000557439 WRAP73Q9P2S5 460 aaPredicted RBP19.38■□□□□ 0.69
XRCC3-218ENST00000557439 TULP1O00294 542 aaPredicted RBP19.38■□□□□ 0.69
XRCC3-218ENST00000557439 PDXKO00764 312 aa19.38■□□□□ 0.69
XRCC3-218ENST00000557439 RPS6KA1Q15418 735 aa19.38■□□□□ 0.69
XRCC3-218ENST00000557439 PODNQ7Z5L7 613 aa19.38■□□□□ 0.69
XRCC3-218ENST00000557439 IFT20Q8IY31 132 aa19.38■□□□□ 0.69
XRCC3-218ENST00000557439 MYCT1Q8N699 235 aa19.38■□□□□ 0.69
XRCC3-218ENST00000557439 USP38Q8NB14 1042 aa19.38■□□□□ 0.69
XRCC3-218ENST00000557439 RUFY1Q96T51 708 aa19.38■□□□□ 0.69
XRCC3-218ENST00000557439 TSKSQ9UJT2 592 aa19.38■□□□□ 0.69
XRCC3-218ENST00000557439 C10orf71Q711Q0 1435 aa19.37■□□□□ 0.69
XRCC3-218ENST00000557439 ATAD5Q96QE3 1844 aa19.37■□□□□ 0.69
XRCC3-218ENST00000557439 ZMYM2Q9UBW7 1377 aa19.37■□□□□ 0.69
XRCC3-218ENST00000557439 ZNF233A6NK53 670 aa19.37■□□□□ 0.69
XRCC3-218ENST00000557439 CALUO43852 315 aaPredicted RBP19.37■□□□□ 0.69
XRCC3-218ENST00000557439 ALDH1B1P30837 517 aa19.37■□□□□ 0.69
XRCC3-218ENST00000557439 GNGT1P63211 74 aa19.37■□□□□ 0.69
XRCC3-218ENST00000557439 AOC3Q16853 763 aa19.37■□□□□ 0.69
XRCC3-218ENST00000557439 MOXD1Q6UVY6 613 aa19.37■□□□□ 0.69
XRCC3-218ENST00000557439 U2AF1L4Q8WU68 220 aaKnown RBP19.37■□□□□ 0.69
XRCC3-218ENST00000557439 IDI2Q9BXS1 227 aa19.37■□□□□ 0.69
XRCC3-218ENST00000557439 TMX4Q9H1E5 349 aaPredicted RBP19.37■□□□□ 0.69
XRCC3-218ENST00000557439 TYW1Q9NV66 732 aaKnown RBP19.37■□□□□ 0.69
XRCC3-218ENST00000557439 IGLV3-22A0A075B6J6 115 aa19.37■□□□□ 0.69
XRCC3-218ENST00000557439 KIF4AO95239 1232 aa19.37■□□□□ 0.69
XRCC3-218ENST00000557439 TRIM49P0CI25 452 aa19.37■□□□□ 0.69
XRCC3-218ENST00000557439 TRIM49CP0CI26 452 aa19.37■□□□□ 0.69
XRCC3-218ENST00000557439 CCT5P48643 541 aa19.37■□□□□ 0.69
XRCC3-218ENST00000557439 PDCLQ13371 301 aa19.37■□□□□ 0.69
XRCC3-218ENST00000557439 RDH13Q8NBN7 331 aa19.37■□□□□ 0.69
XRCC3-218ENST00000557439 TAF4BQ92750 862 aa19.37■□□□□ 0.69
XRCC3-218ENST00000557439 CAVIN3Q969G5 261 aa19.37■□□□□ 0.69
XRCC3-218ENST00000557439 PKD2L1Q9P0L9 805 aa19.37■□□□□ 0.69
XRCC3-218ENST00000557439 DDX3XO00571 662 aaKnown RBP eCLIP19.36■□□□□ 0.69
XRCC3-218ENST00000557439 PPFIA4O75335 1185 aa19.36■□□□□ 0.69
XRCC3-218ENST00000557439 EPB41P11171 864 aaKnown RBP19.36■□□□□ 0.69
XRCC3-218ENST00000557439 ITGA4P13612 1032 aa19.36■□□□□ 0.69
XRCC3-218ENST00000557439 CHRNA5P30532 468 aa19.36■□□□□ 0.69
XRCC3-218ENST00000557439 ARHGAP27Q6ZUM4 889 aa19.36■□□□□ 0.69
XRCC3-218ENST00000557439 MAEAQ7L5Y9 396 aa19.36■□□□□ 0.69
XRCC3-218ENST00000557439 BANK1Q8NDB2 785 aa19.36■□□□□ 0.69
XRCC3-218ENST00000557439 PIK3R5Q8WYR1 880 aa19.36■□□□□ 0.69
XRCC3-218ENST00000557439 CSRNP1Q96S65 589 aa19.36■□□□□ 0.69
XRCC3-218ENST00000557439 CAPS2Q9BXY5 557 aa19.36■□□□□ 0.69
XRCC3-218ENST00000557439 DDX47Q9H0S4 455 aaKnown RBP19.36■□□□□ 0.69
XRCC3-218ENST00000557439 PLCB1Q9NQ66 1216 aa19.36■□□□□ 0.69
XRCC3-218ENST00000557439 SPATA31A6Q5VVP1 1343 aa19.36■□□□□ 0.69
XRCC3-218ENST00000557439 TCP10L2B9ZVM9 353 aa19.36■□□□□ 0.69
XRCC3-218ENST00000557439 SLITRK3O94933 977 aa19.36■□□□□ 0.69
XRCC3-218ENST00000557439 CYP2J2P51589 502 aa19.36■□□□□ 0.69
XRCC3-218ENST00000557439 ERVK-9P63128 1117 aa19.36■□□□□ 0.69
XRCC3-218ENST00000557439 GBP6Q6ZN66 633 aa19.36■□□□□ 0.69
XRCC3-218ENST00000557439 LRRC57Q8N9N7 239 aa19.36■□□□□ 0.69
XRCC3-218ENST00000557439 MASTLQ96GX5 879 aa19.36■□□□□ 0.69
XRCC3-218ENST00000557439 QTRT2Q9H974 415 aaKnown RBP19.36■□□□□ 0.69
XRCC3-218ENST00000557439 OSGEPQ9NPF4 335 aa19.36■□□□□ 0.69
XRCC3-218ENST00000557439 GRIN2DO15399 1336 aa19.35■□□□□ 0.69
XRCC3-218ENST00000557439 CLRN2A0PK11 232 aa19.35■□□□□ 0.69
XRCC3-218ENST00000557439 TBX3O15119 743 aa19.35■□□□□ 0.69
XRCC3-218ENST00000557439 SHOX2O60902 331 aaPredicted RBP19.35■□□□□ 0.69
XRCC3-218ENST00000557439 LRRN2O75325 713 aa19.35■□□□□ 0.69
XRCC3-218ENST00000557439 FAM13AO94988 1023 aa19.35■□□□□ 0.69
XRCC3-218ENST00000557439 EYA4O95677 639 aa19.35■□□□□ 0.69
XRCC3-218ENST00000557439 HOXA7P31268 230 aaPredicted RBP19.35■□□□□ 0.69
XRCC3-218ENST00000557439 RBM26Q5T8P6 1007 aaKnown RBP19.35■□□□□ 0.69
XRCC3-218ENST00000557439 TRMT1LQ7Z2T5 733 aaKnown RBP19.35■□□□□ 0.69
XRCC3-218ENST00000557439 CDAN1Q8IWY9 1227 aa19.35■□□□□ 0.69
XRCC3-218ENST00000557439 METTL13Q8N6R0 699 aa19.35■□□□□ 0.69
XRCC3-218ENST00000557439 FAM20AQ96MK3 541 aa19.35■□□□□ 0.69
XRCC3-218ENST00000557439 TRPC5Q9UL62 973 aaPredicted RBP19.35■□□□□ 0.69
XRCC3-218ENST00000557439 DDX39AO00148 427 aaKnown RBP19.35■□□□□ 0.69
XRCC3-218ENST00000557439 HLTFQ14527 1009 aaKnown RBP eCLIP19.35■□□□□ 0.69
XRCC3-218ENST00000557439 CFAP58Q5T655 872 aa19.35■□□□□ 0.69
XRCC3-218ENST00000557439 STRIP1Q5VSL9 837 aa19.35■□□□□ 0.69
XRCC3-218ENST00000557439 GMCL1P1Q8NEA9 526 aa19.35■□□□□ 0.69
XRCC3-218ENST00000557439 OR2W6PQ8NHA6 318 aa19.35■□□□□ 0.69
XRCC3-218ENST00000557439 TPCN2Q8NHX9 752 aa19.35■□□□□ 0.69
XRCC3-218ENST00000557439 GMCL1Q96IK5 515 aa19.35■□□□□ 0.69
XRCC3-218ENST00000557439 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.35■□□□□ 0.69
XRCC3-218ENST00000557439 SAMM50Q9Y512 469 aa19.35■□□□□ 0.69
XRCC3-218ENST00000557439 ABCB4P21439 1286 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 PPFIA1Q13136 1202 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 NNTQ13423 1086 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 CBWD6Q4V339 395 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 GLE1Q53GS7 698 aaKnown RBP19.34■□□□□ 0.69
XRCC3-218ENST00000557439 CBWD3Q5JTY5 395 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 CBWD5Q5RIA9 395 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 LRCH2Q5VUJ6 765 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 OTOP1Q7RTM1 612 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 GLYCTKQ8IVS8 523 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 LNX1Q8TBB1 728 aaPredicted RBP19.34■□□□□ 0.69
XRCC3-218ENST00000557439 SH2D3AQ9BRG2 576 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 NEUROG2Q9H2A3 272 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms