RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 MICAL3Q7RTP6 2002 aa10□□□□□ -0.81
VRK1-206ENST00000557222 BAZ2BQ9UIF8 2168 aaKnown RBP10□□□□□ -0.81
VRK1-206ENST00000557222 ERICH2A1L162 156 aa10□□□□□ -0.81
VRK1-206ENST00000557222 SPATA31C2B4DYI2 1134 aa10□□□□□ -0.81
VRK1-206ENST00000557222 NCK2O43639 380 aa10□□□□□ -0.81
VRK1-206ENST00000557222 IGHDP01880 384 aa10□□□□□ -0.81
VRK1-206ENST00000557222 LGALS2P05162 132 aa10□□□□□ -0.81
VRK1-206ENST00000557222 SMIM10L2AP0DMW4 78 aa10□□□□□ -0.81
VRK1-206ENST00000557222 SMIM10L2BP0DMW5 78 aa10□□□□□ -0.81
VRK1-206ENST00000557222 SMARCA1P28370 1054 aa10□□□□□ -0.81
VRK1-206ENST00000557222 HOXA13P31271 388 aaPredicted RBP10□□□□□ -0.81
VRK1-206ENST00000557222 CBLBQ13191 982 aa10□□□□□ -0.81
VRK1-206ENST00000557222 SART3Q15020 963 aaKnown RBP10□□□□□ -0.81
VRK1-206ENST00000557222 TIGD5Q53EQ6 642 aa10□□□□□ -0.81
VRK1-206ENST00000557222 FAM26DQ5JW98 314 aa10□□□□□ -0.81
VRK1-206ENST00000557222 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10□□□□□ -0.817e-9■□□□□ 9.8
VRK1-206ENST00000557222 SPRED2Q7Z698 418 aa10□□□□□ -0.81
VRK1-206ENST00000557222 TMCO2Q7Z6W1 182 aaPredicted RBP10□□□□□ -0.81
VRK1-206ENST00000557222 RPAINQ86UA6 219 aa10□□□□□ -0.81
VRK1-206ENST00000557222 GIMAP8Q8ND71 665 aaPredicted RBP10□□□□□ -0.81
VRK1-206ENST00000557222 RUFY2Q8WXA3 655 aa10□□□□□ -0.81
VRK1-206ENST00000557222 RNPEPQ9H4A4 650 aa10□□□□□ -0.81
VRK1-206ENST00000557222 RAPGEFL1Q9UHV5 662 aa10□□□□□ -0.81
VRK1-206ENST00000557222 SIP14410 1827 aa10□□□□□ -0.81
VRK1-206ENST00000557222 COL4A6Q14031 1691 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 H3BNC9 293 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 PIK3CDO00329 1044 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 NOP56O00567 594 aaKnown RBP9.99□□□□□ -0.81
VRK1-206ENST00000557222 IFIT3O14879 490 aaKnown RBP9.99□□□□□ -0.81
VRK1-206ENST00000557222 FIBPO43427 364 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 RPLP2P05387 115 aaKnown RBP9.99□□□□□ -0.81
VRK1-206ENST00000557222 RB1P06400 928 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 ADAM17P78536 824 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 TROAPQ12815 778 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 COL19A1Q14993 1142 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 SLC35G1Q2M3R5 365 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 EPC2Q52LR7 807 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 FAM43BQ6ZT52 329 aaPredicted RBP9.99□□□□□ -0.81
VRK1-206ENST00000557222 Q6ZVU0 165 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 CYB5R4Q7L1T6 521 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 FAM178BQ8IXR5 827 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 MYOCDQ8IZQ8 938 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 GJD3Q8N144 294 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 IL31RAQ8NI17 732 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 PIGSQ96S52 555 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 MTA3Q9BTC8 594 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 ZNF215Q9UL58 517 aaPredicted RBP9.99□□□□□ -0.81
VRK1-206ENST00000557222 FAM50BQ9Y247 325 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 NRCAMQ92823 1304 aa9.99□□□□□ -0.81
VRK1-206ENST00000557222 MYO7AQ13402 2215 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 TREHO43280 583 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 CYTH3O43739 400 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 CYP21A2P08686 494 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 ALADP13716 330 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 MRPS9P82933 396 aaKnown RBP9.98□□□□□ -0.81
VRK1-206ENST00000557222 WTAPQ15007 396 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 PCNX4Q63HM2 1172 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 FAM117BQ6P1L5 589 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 CATIPQ7Z7H3 387 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 NLRX1Q86UT6 975 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 FCHSD1Q86WN1 690 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 HOMER1Q86YM7 354 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 TMEM192Q8IY95 271 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 NCOA7Q8NI08 942 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.98□□□□□ -0.81
VRK1-206ENST00000557222 NEK9Q8TD19 979 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 CDHR1Q96JP9 859 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 YME1L1Q96TA2 773 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 GPR20Q99678 358 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 LZTS2Q9BRK4 669 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 C17orf80Q9BSJ5 609 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 SPZ1Q9BXG8 430 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 PRKAG3Q9UGI9 489 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 MTUS1Q9ULD2 1270 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 RWDD3Q9Y3V2 267 aa9.98□□□□□ -0.81
VRK1-206ENST00000557222 COL4A4P53420 1690 aaPredicted RBP9.98□□□□□ -0.81
VRK1-206ENST00000557222 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.97□□□□□ -0.81
VRK1-206ENST00000557222 PRR33A8MZF0 331 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 ESPNB1AK53 854 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 C5orf67F2Z3F1 127 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 MAN1A2O60476 641 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 FBXO45P0C2W1 286 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 KCNA5P22460 613 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 KIF5BP33176 963 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 GNAQP50148 359 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 RAB15P59190 212 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 SEMA3FQ13275 785 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 GPM6BQ13491 265 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 TAF2Q6P1X5 1199 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 CYFIP1Q7L576 1253 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 RALYLQ86SE5 291 aaKnown RBP9.97□□□□□ -0.81
VRK1-206ENST00000557222 RSPH3Q86UC2 560 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 TEX2Q8IWB9 1127 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 NPAS3Q8IXF0 933 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 TMTC2Q8N394 836 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 CUL5Q93034 780 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 PABPC5Q96DU9 382 aaKnown RBP9.97□□□□□ -0.81
VRK1-206ENST00000557222 IFIH1Q9BYX4 1025 aaKnown RBP9.97□□□□□ -0.81
VRK1-206ENST00000557222 LMAN2LQ9H0V9 348 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 C11orf16Q9NQ32 467 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms