RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 GRM8O00222 908 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 SEPT4O43236 478 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 PEX10O60683 326 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 MAP4K4O95819 1239 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-223ENST00000557076 CLTBP09497 229 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 CYBAP13498 195 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 NTF4P34130 210 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 ZEB1P37275 1124 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-223ENST00000557076 CCNA1P78396 465 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 TFF2Q03403 129 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 RING1Q06587 406 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 LRRC14Q15048 493 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 ENOX2Q16206 610 aaKnown RBP5.86□□□□□ -1.47
SCFD1-223ENST00000557076 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.86□□□□□ -1.47
SCFD1-223ENST00000557076 METTL24Q5JXM2 366 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 CCDC174Q6PII3 467 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 C16orf59Q7L2K0 433 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 ANKRD33Q7Z3H0 272 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 CCDC84Q86UT8 332 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-223ENST00000557076 FOXQ1Q9C009 403 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 AS3MTQ9HBK9 375 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 DDX4Q9NQI0 724 aaKnown RBP5.86□□□□□ -1.47
SCFD1-223ENST00000557076 PRDM7Q9NQW5 492 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 TMOD4Q9NZQ9 345 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 LMCD1Q9NZU5 365 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-223ENST00000557076 MSRAQ9UJ68 235 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 MAPK8IP1Q9UQF2 711 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 RABGAP1Q9Y3P9 1069 aa5.86□□□□□ -1.47
SCFD1-223ENST00000557076 ARAP2Q8WZ64 1704 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 SALL1Q9NSC2 1324 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 PNMA6FA0A0J9YX94 578 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 PRR33A8MZF0 331 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 STRNO43815 780 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 TIMP1P01033 207 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 PRDX5P30044 214 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 CYP2C19P33261 490 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 AFMP43652 599 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 KCNQ1P51787 676 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 LRRC41Q15345 812 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 PUM3Q15397 648 aaKnown RBP5.85□□□□□ -1.47
SCFD1-223ENST00000557076 RAB30Q15771 203 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 NKPD1Q17RQ9 610 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 LRRC24Q50LG9 513 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 TMEM240Q5SV17 173 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 OLFML2BQ68BL8 750 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 CCDC129Q6ZRS4 1044 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 SLC44A5Q8NCS7 719 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 C3orf58Q8NDZ4 430 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 FBF1Q8TES7 1133 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 LPIN2Q92539 896 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 FERMT2Q96AC1 680 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 KAZALD1Q96I82 304 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 PPP1R16BQ96T49 567 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.85□□□□□ -1.472e-9■□□□□ 9.9
SCFD1-223ENST00000557076 KRTAP4-9Q9BYQ8 210 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 GINM1Q9NU53 330 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 GNL3LQ9NVN8 582 aaKnown RBP5.85□□□□□ -1.47
SCFD1-223ENST00000557076 C9orf78Q9NZ63 289 aaPredicted RBP5.85□□□□□ -1.47
SCFD1-223ENST00000557076 COG5Q9UP83 839 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 CTNND2Q9UQB3 1225 aa5.85□□□□□ -1.47
SCFD1-223ENST00000557076 TRANK1O15050 2925 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 GAKO14976 1311 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 GPR75-ASB3A0A0A6YYF3 556 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 DCDC2CA8MYV0 355 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 ENC1O14682 589 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 APAF1O14727 1248 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 ALDH1L1O75891 902 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 EOMESO95936 686 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 ASNSP08243 561 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 SLC5A1P13866 664 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 BMP6P22004 513 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 PLCB3Q01970 1234 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 NHLH1Q02575 133 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 GRB14Q14449 540 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 DSC3Q14574 896 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 RRP1BQ14684 758 aaKnown RBP5.84□□□□□ -1.47
SCFD1-223ENST00000557076 WDR43Q15061 677 aaKnown RBP eCLIP5.84□□□□□ -1.47
SCFD1-223ENST00000557076 MLANAQ16655 118 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 TWISTNBQ3B726 338 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-223ENST00000557076 RABL6Q3YEC7 729 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-223ENST00000557076 ZBTB37Q5TC79 503 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 MFSD5Q6N075 450 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 LLGL2Q6P1M3 1020 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 LBX2Q6XYB7 198 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 ZGPATQ8N5A5 531 aaKnown RBP5.84□□□□□ -1.47
SCFD1-223ENST00000557076 NPLOC4Q8TAT6 608 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 SLC28A3Q9HAS3 691 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 CWC22Q9HCG8 908 aaKnown RBP5.84□□□□□ -1.47
SCFD1-223ENST00000557076 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.84□□□□□ -1.47
SCFD1-223ENST00000557076 HERC5Q9UII4 1024 aaKnown RBP5.84□□□□□ -1.47
SCFD1-223ENST00000557076 DENND2AQ9ULE3 1009 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 IVNS1ABPQ9Y6Y0 642 aa5.84□□□□□ -1.47
SCFD1-223ENST00000557076 ZDBF2Q9HCK1 2354 aa5.84□□□□□ -1.48
SCFD1-223ENST00000557076 C5orf42Q9H799 3197 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 USP34Q70CQ2 3546 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 ZNF503-AS2A6NEH8 195 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 GRXCR1A8MXD5 290 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 TREHO43280 583 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 CNMDO75829 334 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms