RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 FNIP1Q8TF40 1166 aa6.33□□□□□ -1.4
PCNX1-212ENST00000556516 ZNF496Q96IT1 587 aaPredicted RBP6.33□□□□□ -1.4
PCNX1-212ENST00000556516 PWWP2AQ96N64 755 aa6.33□□□□□ -1.4
PCNX1-212ENST00000556516 INCENPQ9NQS7 918 aa6.33□□□□□ -1.4
PCNX1-212ENST00000556516 HOMER2Q9NSB8 354 aa6.33□□□□□ -1.4
PCNX1-212ENST00000556516 ARHGAP20Q9P2F6 1191 aa6.33□□□□□ -1.4
PCNX1-212ENST00000556516 MSRAQ9UJ68 235 aa6.33□□□□□ -1.4
PCNX1-212ENST00000556516 KCTD3Q9Y597 815 aa6.33□□□□□ -1.4
PCNX1-212ENST00000556516 UBA6A0AVT1 1052 aaPredicted RBP6.32□□□□□ -1.4
PCNX1-212ENST00000556516 NPIPB6E9PJ23 425 aa6.32□□□□□ -1.4
PCNX1-212ENST00000556516 PAX4O43316 350 aa6.32□□□□□ -1.4
PCNX1-212ENST00000556516 KDM1AO60341 852 aa6.32□□□□□ -1.4
PCNX1-212ENST00000556516 CYP17A1P05093 508 aa6.32□□□□□ -1.4
PCNX1-212ENST00000556516 MED14OSP0DP75 135 aa6.32□□□□□ -1.4
PCNX1-212ENST00000556516 ADCY8P40145 1251 aa6.32□□□□□ -1.4
PCNX1-212ENST00000556516 FNTBP49356 437 aa6.32□□□□□ -1.4
PCNX1-212ENST00000556516 ITKQ08881 620 aa6.32□□□□□ -1.4
PCNX1-212ENST00000556516 MYBPC3Q14896 1274 aa6.32□□□□□ -1.4
PCNX1-212ENST00000556516 PDCD1Q15116 288 aa6.32□□□□□ -1.4
PCNX1-212ENST00000556516 BRDTQ58F21 947 aaPredicted RBP6.32□□□□□ -1.4
PCNX1-212ENST00000556516 UNQ6494/PRO21346Q6UXR6 183 aa6.32□□□□□ -1.4
PCNX1-212ENST00000556516 ANKRD13AQ8IZ07 590 aa6.32□□□□□ -1.4
PCNX1-212ENST00000556516 IGDCC4Q8TDY8 1250 aa6.32□□□□□ -1.4
PCNX1-212ENST00000556516 ZNF526Q8TF50 670 aaPredicted RBP6.32□□□□□ -1.4
PCNX1-212ENST00000556516 TUBGCP5Q96RT8 1024 aa6.32□□□□□ -1.4
PCNX1-212ENST00000556516 MYL10Q9BUA6 226 aa6.32□□□□□ -1.4
PCNX1-212ENST00000556516 CD320Q9NPF0 282 aa6.32□□□□□ -1.4
PCNX1-212ENST00000556516 DLL4Q9NR61 685 aa6.32□□□□□ -1.4
PCNX1-212ENST00000556516 SPATA6Q9NWH7 488 aaPredicted RBP6.32□□□□□ -1.4
PCNX1-212ENST00000556516 DDX56Q9NY93 547 aaKnown RBP6.32□□□□□ -1.4
PCNX1-212ENST00000556516 MAGEL2Q9UJ55 1249 aa6.32□□□□□ -1.4
PCNX1-212ENST00000556516 SYNJ1O43426 1573 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 ERCC6Q03468 1493 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.31□□□□□ -1.4
PCNX1-212ENST00000556516 ELL2O00472 640 aaPredicted RBP6.31□□□□□ -1.4
PCNX1-212ENST00000556516 RAB11FIP3O75154 756 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 PRLP01236 227 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 CD40P25942 277 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 LSP1P33241 339 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 MLLT6P55198 1093 aaPredicted RBP6.31□□□□□ -1.4
PCNX1-212ENST00000556516 SCAND1P57086 179 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 LINC00310P59036 64 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 IL13RA1P78552 427 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 HTRA3P83110 453 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 EPHA7Q15375 998 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 ZBTB41Q5SVQ8 909 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 C7orf31Q8N865 590 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 ZNF610Q8N9Z0 462 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 KYQ8NBH2 561 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 TGFBRAP1Q8WUH2 860 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 CLIC6Q96NY7 704 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 TMEM209Q96SK2 561 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 SLC38A3Q99624 504 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 ANO3Q9BYT9 981 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 NGRNQ9NPE2 291 aaKnown RBP6.31□□□□□ -1.4
PCNX1-212ENST00000556516 C14orf119Q9NWQ9 140 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 HSPBP1Q9NZL4 362 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 EDARQ9UNE0 448 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 NOC2LQ9Y3T9 749 aaKnown RBP6.31□□□□□ -1.4
PCNX1-212ENST00000556516 ASB1Q9Y576 335 aa6.31□□□□□ -1.4
PCNX1-212ENST00000556516 CUX1P39880 1505 aa6.3□□□□□ -1.4
PCNX1-212ENST00000556516 WASHC2CQ9Y4E1 1318 aa6.3□□□□□ -1.4
PCNX1-212ENST00000556516 ULK1O75385 1050 aa6.3□□□□□ -1.4
PCNX1-212ENST00000556516 FBXO21O94952 628 aa6.3□□□□□ -1.4
PCNX1-212ENST00000556516 IARSP41252 1262 aaKnown RBP6.3□□□□□ -1.4
PCNX1-212ENST00000556516 PHC1P78364 1004 aa6.3□□□□□ -1.4
PCNX1-212ENST00000556516 ALDH6A1Q02252 535 aaKnown RBP6.3□□□□□ -1.4
PCNX1-212ENST00000556516 DLX2Q07687 328 aaPredicted RBP6.3□□□□□ -1.4
PCNX1-212ENST00000556516 ABCB5Q2M3G0 1257 aa6.3□□□□□ -1.4
PCNX1-212ENST00000556516 SLFN12LQ6IEE8 588 aa6.3□□□□□ -1.4
PCNX1-212ENST00000556516 FERMT3Q86UX7 667 aa6.3□□□□□ -1.4
PCNX1-212ENST00000556516 LINC00482Q8N8I6 264 aa6.3□□□□□ -1.4
PCNX1-212ENST00000556516 ZCCHC14Q8WYQ9 949 aaKnown RBP6.3□□□□□ -1.4
PCNX1-212ENST00000556516 ZDHHC5Q9C0B5 715 aa6.3□□□□□ -1.4
PCNX1-212ENST00000556516 PRDM12Q9H4Q4 367 aa6.3□□□□□ -1.4
PCNX1-212ENST00000556516 GALNT8Q9NY28 637 aa6.3□□□□□ -1.4
PCNX1-212ENST00000556516 TRHDEQ9UKU6 1024 aa6.3□□□□□ -1.4
PCNX1-212ENST00000556516 TNIKQ9UKE5 1360 aa6.3□□□□□ -1.4
PCNX1-212ENST00000556516 BIVM-ERCC5R4GMW8 1640 aa6.29□□□□□ -1.4
PCNX1-212ENST00000556516 PRPF6O94906 941 aaKnown RBP6.29□□□□□ -1.4
PCNX1-212ENST00000556516 TSPAN15O95858 294 aa6.29□□□□□ -1.4
PCNX1-212ENST00000556516 MT-CO1P00395 513 aa6.29□□□□□ -1.4
PCNX1-212ENST00000556516 ECE1P42892 770 aa6.29□□□□□ -1.4
PCNX1-212ENST00000556516 SESN3P58005 492 aa6.29□□□□□ -1.4
PCNX1-212ENST00000556516 CD83Q01151 205 aa6.29□□□□□ -1.4
PCNX1-212ENST00000556516 LRRC32Q14392 662 aa6.29□□□□□ -1.4
PCNX1-212ENST00000556516 NOLC1Q14978 699 aaKnown RBP eCLIP6.29□□□□□ -1.4
PCNX1-212ENST00000556516 KCNA10Q16322 511 aa6.29□□□□□ -1.4
PCNX1-212ENST00000556516 VWA3BQ502W6 1294 aa6.29□□□□□ -1.4
PCNX1-212ENST00000556516 CT83Q5H943 113 aa6.29□□□□□ -1.4
PCNX1-212ENST00000556516 TTC38Q5R3I4 469 aa6.29□□□□□ -1.4
PCNX1-212ENST00000556516 DNMBPQ6XZF7 1577 aa6.29□□□□□ -1.4
PCNX1-212ENST00000556516 POU5F2Q8N7G0 328 aa6.29□□□□□ -1.4
PCNX1-212ENST00000556516 AHCYL2Q96HN2 611 aaKnown RBP6.29□□□□□ -1.4
PCNX1-212ENST00000556516 PUS7Q96PZ0 661 aaKnown RBP6.29□□□□□ -1.4
PCNX1-212ENST00000556516 ASPSCR1Q9BZE9 553 aa6.29□□□□□ -1.4
PCNX1-212ENST00000556516 IRF2BPLQ9H1B7 796 aa6.29□□□□□ -1.4
PCNX1-212ENST00000556516 KCND1Q9NSA2 647 aa6.29□□□□□ -1.4
PCNX1-212ENST00000556516 PPP2R3BQ9Y5P8 575 aa6.29□□□□□ -1.4
PCNX1-212ENST00000556516 TOPBP1Q92547 1522 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms