RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 NME8Q8N427 588 aa12.97□□□□□ -0.33
SLIRP-206ENST00000556375 FAM161BQ96MY7 647 aa12.97□□□□□ -0.33
SLIRP-206ENST00000556375 GUCD1Q96NT3 240 aa12.97□□□□□ -0.33
SLIRP-206ENST00000556375 IFIH1Q9BYX4 1025 aaKnown RBP12.97□□□□□ -0.33
SLIRP-206ENST00000556375 OSBPL7Q9BZF2 842 aa12.97□□□□□ -0.33
SLIRP-206ENST00000556375 NRBP2Q9NSY0 501 aa12.97□□□□□ -0.33
SLIRP-206ENST00000556375 YBX2Q9Y2T7 364 aaKnown RBP12.97□□□□□ -0.33
SLIRP-206ENST00000556375 SQORQ9Y6N5 450 aa12.97□□□□□ -0.33
SLIRP-206ENST00000556375 TRANK1O15050 2925 aa12.97□□□□□ -0.33
SLIRP-206ENST00000556375 MYO9BQ13459 2157 aa12.97□□□□□ -0.33
SLIRP-206ENST00000556375 COL6A3P12111 3177 aa12.97□□□□□ -0.33
SLIRP-206ENST00000556375 EML1O00423 815 aa12.96□□□□□ -0.33
SLIRP-206ENST00000556375 WNT7AO00755 349 aa12.96□□□□□ -0.33
SLIRP-206ENST00000556375 MAGEB2O15479 319 aa12.96□□□□□ -0.33
SLIRP-206ENST00000556375 PSMC5P62195 406 aa12.96□□□□□ -0.33
SLIRP-206ENST00000556375 SPIRE1Q08AE8 756 aa12.96□□□□□ -0.33
SLIRP-206ENST00000556375 ORC2Q13416 577 aaPredicted RBP12.96□□□□□ -0.33
SLIRP-206ENST00000556375 GNL2Q13823 731 aaKnown RBP12.96□□□□□ -0.33
SLIRP-206ENST00000556375 LPIN1Q14693 890 aa12.96□□□□□ -0.33
SLIRP-206ENST00000556375 CALCRLQ16602 461 aa12.96□□□□□ -0.33
SLIRP-206ENST00000556375 XKR3Q5GH77 459 aa12.96□□□□□ -0.33
SLIRP-206ENST00000556375 TRMT1LQ7Z2T5 733 aaKnown RBP12.96□□□□□ -0.33
SLIRP-206ENST00000556375 NOSTRINQ8IVI9 506 aa12.96□□□□□ -0.33
SLIRP-206ENST00000556375 KIAA0319LQ8IZA0 1049 aa12.96□□□□□ -0.33
SLIRP-206ENST00000556375 USP38Q8NB14 1042 aa12.96□□□□□ -0.33
SLIRP-206ENST00000556375 NKX2-4Q9H2Z4 354 aa12.96□□□□□ -0.33
SLIRP-206ENST00000556375 ZNF576Q9H609 170 aa12.96□□□□□ -0.33
SLIRP-206ENST00000556375 SEPT9Q9UHD8 586 aaPredicted RBP12.96□□□□□ -0.33
SLIRP-206ENST00000556375 STXBP5LQ9Y2K9 1186 aa12.96□□□□□ -0.33
SLIRP-206ENST00000556375 COL4A6Q14031 1691 aa12.96□□□□□ -0.34
SLIRP-206ENST00000556375 KIF28PB7ZC32 967 aa12.95□□□□□ -0.34
SLIRP-206ENST00000556375 DKC1O60832 514 aaKnown RBP eCLIP12.95□□□□□ -0.34
SLIRP-206ENST00000556375 AMHP03971 560 aa12.95□□□□□ -0.34
SLIRP-206ENST00000556375 QARSP47897 775 aaKnown RBP12.95□□□□□ -0.34
SLIRP-206ENST00000556375 TRAPPC10P48553 1259 aa12.95□□□□□ -0.34
SLIRP-206ENST00000556375 TMEM62Q0P6H9 643 aa12.95□□□□□ -0.34
SLIRP-206ENST00000556375 EPHA7Q15375 998 aa12.95□□□□□ -0.34
SLIRP-206ENST00000556375 TARBP2Q15633 366 aaKnown RBP12.95□□□□□ -0.34
SLIRP-206ENST00000556375 NCAPH2Q6IBW4 605 aa12.95□□□□□ -0.34
SLIRP-206ENST00000556375 LINC01465Q8N7H1 131 aa12.95□□□□□ -0.34
SLIRP-206ENST00000556375 BANK1Q8NDB2 785 aa12.95□□□□□ -0.34
SLIRP-206ENST00000556375 NIFKQ9BYG3 293 aaKnown RBP12.95□□□□□ -0.34
SLIRP-206ENST00000556375 CELF4Q9BZC1 486 aaKnown RBP12.95□□□□□ -0.34
SLIRP-206ENST00000556375 SLC28A3Q9HAS3 691 aa12.95□□□□□ -0.34
SLIRP-206ENST00000556375 COL4A4P53420 1690 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-206ENST00000556375 RBAK-RBAKDNI3L0D1 243 aa12.94□□□□□ -0.34
SLIRP-206ENST00000556375 TLL1O43897 1013 aa12.94□□□□□ -0.34
SLIRP-206ENST00000556375 STBD1O95210 358 aa12.94□□□□□ -0.34
SLIRP-206ENST00000556375 GJB5O95377 273 aa12.94□□□□□ -0.34
SLIRP-206ENST00000556375 P4HBP07237 508 aaKnown RBP12.94□□□□□ -0.34
SLIRP-206ENST00000556375 CA3P07451 260 aa12.94□□□□□ -0.34
SLIRP-206ENST00000556375 MYOGP15173 224 aa12.94□□□□□ -0.34
SLIRP-206ENST00000556375 ATP2B1P20020 1258 aa12.94□□□□□ -0.34
SLIRP-206ENST00000556375 U2AF2P26368 475 aaKnown RBP eCLIP12.94□□□□□ -0.341e-7■□□□□ 8
SLIRP-206ENST00000556375 GJB2P29033 226 aa12.94□□□□□ -0.34
SLIRP-206ENST00000556375 MCM7P33993 719 aa12.94□□□□□ -0.34
SLIRP-206ENST00000556375 CLCN3P51790 818 aa12.94□□□□□ -0.34
SLIRP-206ENST00000556375 TBC1D8BQ0IIM8 1120 aa12.94□□□□□ -0.34
SLIRP-206ENST00000556375 PPP2R2DQ66LE6 453 aa12.94□□□□□ -0.34
SLIRP-206ENST00000556375 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.94□□□□□ -0.34
SLIRP-206ENST00000556375 METTL13Q8N6R0 699 aa12.94□□□□□ -0.34
SLIRP-206ENST00000556375 MTMR9Q96QG7 549 aa12.94□□□□□ -0.34
SLIRP-206ENST00000556375 MAP7D2Q96T17 732 aa12.94□□□□□ -0.34
SLIRP-206ENST00000556375 CDX2Q99626 313 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-206ENST00000556375 LXNQ9BS40 222 aa12.94□□□□□ -0.34
SLIRP-206ENST00000556375 AGO3Q9H9G7 860 aaKnown RBP12.94□□□□□ -0.34
SLIRP-206ENST00000556375 NOL7Q9UMY1 257 aaKnown RBP12.94□□□□□ -0.34
SLIRP-206ENST00000556375 PCDHA12Q9UN75 941 aa12.94□□□□□ -0.34
SLIRP-206ENST00000556375 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-206ENST00000556375 TTC3P53804 2025 aa12.94□□□□□ -0.34
SLIRP-206ENST00000556375 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-206ENST00000556375 TMEM150BA6NC51 233 aa12.93□□□□□ -0.34
SLIRP-206ENST00000556375 TMOD1P28289 359 aa12.93□□□□□ -0.34
SLIRP-206ENST00000556375 CD52P31358 61 aa12.93□□□□□ -0.34
SLIRP-206ENST00000556375 PAK2Q13177 524 aa12.93□□□□□ -0.34
SLIRP-206ENST00000556375 GRIN2CQ14957 1233 aa12.93□□□□□ -0.34
SLIRP-206ENST00000556375 MTERF2Q49AM1 385 aa12.93□□□□□ -0.34
SLIRP-206ENST00000556375 TTC38Q5R3I4 469 aa12.93□□□□□ -0.34
SLIRP-206ENST00000556375 EFCAB12Q6NXP0 572 aa12.93□□□□□ -0.34
SLIRP-206ENST00000556375 ANO5Q75V66 913 aa12.93□□□□□ -0.34
SLIRP-206ENST00000556375 TMCO2Q7Z6W1 182 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-206ENST00000556375 C4orf19Q8IY42 314 aa12.93□□□□□ -0.34
SLIRP-206ENST00000556375 MYOCDQ8IZQ8 938 aa12.93□□□□□ -0.34
SLIRP-206ENST00000556375 ZNF710Q8N1W2 664 aa12.93□□□□□ -0.34
SLIRP-206ENST00000556375 NEK9Q8TD19 979 aa12.93□□□□□ -0.34
SLIRP-206ENST00000556375 CEP89Q96ST8 783 aa12.93□□□□□ -0.34
SLIRP-206ENST00000556375 ZBED2Q9BTP6 218 aa12.93□□□□□ -0.34
SLIRP-206ENST00000556375 TMEM60Q9H2L4 133 aa12.93□□□□□ -0.34
SLIRP-206ENST00000556375 TTC12Q9H892 705 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-206ENST00000556375 SMC3Q9UQE7 1217 aa12.93□□□□□ -0.34
SLIRP-206ENST00000556375 PPME1Q9Y570 386 aa12.93□□□□□ -0.34
SLIRP-206ENST00000556375 NLRC5Q86WI3 1866 aa12.93□□□□□ -0.34
SLIRP-206ENST00000556375 DDX11L8A8MPP1 907 aa12.92□□□□□ -0.34
SLIRP-206ENST00000556375 VTNP04004 478 aa12.92□□□□□ -0.34
SLIRP-206ENST00000556375 OR52Z1P0C646 297 aa12.92□□□□□ -0.34
SLIRP-206ENST00000556375 TXKP42681 527 aa12.92□□□□□ -0.34
SLIRP-206ENST00000556375 CRYBB1P53674 252 aaPredicted RBP12.92□□□□□ -0.34
SLIRP-206ENST00000556375 CUL4AQ13619 759 aa12.92□□□□□ -0.34
SLIRP-206ENST00000556375 KIZQ2M2Z5 673 aa12.92□□□□□ -0.34
SLIRP-206ENST00000556375 RALGAPA2Q2PPJ7 1873 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms