RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573	ZC3H18	Q86VM9	953 aa	Known RBP	6.26	□□□□□ -1.41
KTN1-223	ENST00000555573	LDHD	Q86WU2	507 aa		6.26	□□□□□ -1.41
KTN1-223	ENST00000555573	TSR2	Q969E8	191 aa	Known RBP	6.26	□□□□□ -1.41
KTN1-223	ENST00000555573	FAXDC2	Q96IV6	333 aa		6.26	□□□□□ -1.41
KTN1-223	ENST00000555573	ANO3	Q9BYT9	981 aa		6.26	□□□□□ -1.41
KTN1-223	ENST00000555573	RNF38	Q9H0F5	515 aa		6.26	□□□□□ -1.41
KTN1-223	ENST00000555573	SIRT5	Q9NXA8	310 aa		6.26	□□□□□ -1.41
KTN1-223	ENST00000555573	MBD1	Q9UIS9	605 aa	Predicted RBP	6.26	□□□□□ -1.41
KTN1-223	ENST00000555573	PCDHA5	Q9Y5H7	936 aa		6.26	□□□□□ -1.41
KTN1-223	ENST00000555573	ATF2	P15336	505 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	CDR1	P51861	262 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	SLC6A3	Q01959	620 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	ALDH6A1	Q02252	535 aa	Known RBP	6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	PIN1	Q13526	163 aa	Predicted RBP	6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	MYBPC3	Q14896	1274 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	TTC38	Q5R3I4	469 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	ZBTB41	Q5SVQ8	909 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	PRAMEF9	Q5VWM5	478 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	VASN	Q6EMK4	673 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	LRSAM1	Q6UWE0	723 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	ESPNL	Q6ZVH7	1005 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	MYL10	Q9BUA6	226 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	AMN	Q9BXJ7	453 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	MCOLN1	Q9GZU1	580 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	EPB41L4B	Q9H329	900 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	NGRN	Q9NPE2	291 aa	Known RBP	6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	CCM2L	Q9NUG4	571 aa	Predicted RBP	6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	ZIM2	Q9NZV7	527 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	PPP2R3B	Q9Y5P8	575 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	PEX10	O60683	326 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	PRPF6	O94906	941 aa	Known RBP	6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	APOL3	O95236	402 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	ENO2	P09104	434 aa	Predicted RBP	6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	RBP3	P10745	1247 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	RGS3	P49796	1198 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	MANF	P55145	182 aa	Known RBP	6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	CT83	Q5H943	113 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	UNQ6494/PRO21346	Q6UXR6	183 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	SMARCC2	Q8TAQ2	1214 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	E2F7	Q96AV8	911 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	MAML3	Q96JK9	1138 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	ACAP3	Q96P50	834 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	ORAI2	Q96SN7	254 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	FOXB1	Q99853	325 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	RTFDC1	Q9BY42	306 aa	Predicted RBP	6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	SLC13A1	Q9BZW2	595 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	DCP1A	Q9NPI6	582 aa	Predicted RBP	6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	INCENP	Q9NQS7	918 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	MKS1	Q9NXB0	559 aa		6.25	□□□□□ -1.41
KTN1-223	ENST00000555573	TRIM75P	A6NK02	468 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	PCDHGA12	O60330	932 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	SCGB1D2	O95969	90 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	CFB	P00751	764 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	CYP2C8	P10632	490 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	IRAK1	P51617	712 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	PPP2R5A	Q15172	486 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	FSCN1	Q16658	493 aa	Known RBP	6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	SKIDA1	Q1XH10	827 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	PHF19	Q5T6S3	580 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	SLFN12L	Q6IEE8	588 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	CCDC62	Q6P9F0	684 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	STK32C	Q86UX6	486 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	DTX3	Q8N9I9	347 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	IGDCC4	Q8TDY8	1250 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	SGPP1	Q9BX95	441 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	CDH19	Q9H159	772 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	LUC7L2	Q9Y383	392 aa	Known RBP	6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	PCDHGA9	Q9Y5G4	932 aa	Known RBP	6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	PCDHGA8	Q9Y5G5	932 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	PCDHGA7	Q9Y5G6	932 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	PCDHGA6	Q9Y5G7	932 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	PCDHGA3	Q9Y5H0	932 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	PCDHGA2	Q9Y5H1	932 aa		6.24	□□□□□ -1.41
KTN1-223	ENST00000555573	PRSS38	A1L453	326 aa		6.23	□□□□□ -1.41
KTN1-223	ENST00000555573	TSPAN6	O43657	245 aa		6.23	□□□□□ -1.41
KTN1-223	ENST00000555573	ENPP1	P22413	925 aa		6.23	□□□□□ -1.41
KTN1-223	ENST00000555573	CCND1	P24385	295 aa		6.23	□□□□□ -1.41
KTN1-223	ENST00000555573	EPHB3	P54753	998 aa		6.23	□□□□□ -1.41
KTN1-223	ENST00000555573	ROM1	Q03395	351 aa		6.23	□□□□□ -1.41
KTN1-223	ENST00000555573	ODF1	Q14990	250 aa		6.23	□□□□□ -1.41
KTN1-223	ENST00000555573	TARBP2	Q15633	366 aa	Known RBP	6.23	□□□□□ -1.41
KTN1-223	ENST00000555573	MLANA	Q16655	118 aa		6.23	□□□□□ -1.41
KTN1-223	ENST00000555573	TIGD7	Q6NT04	549 aa	Predicted RBP	6.23	□□□□□ -1.41
KTN1-223	ENST00000555573	B3GNT8	Q7Z7M8	397 aa		6.23	□□□□□ -1.41
KTN1-223	ENST00000555573	IGDCC3	Q8IVU1	814 aa		6.23	□□□□□ -1.41
KTN1-223	ENST00000555573	AMOTL1	Q8IY63	956 aa		6.23	□□□□□ -1.41
KTN1-223	ENST00000555573	MZB1	Q8WU39	189 aa		6.23	□□□□□ -1.41
KTN1-223	ENST00000555573	EAF2	Q96CJ1	260 aa	Predicted RBP	6.23	□□□□□ -1.41
KTN1-223	ENST00000555573	PRDM12	Q9H4Q4	367 aa		6.23	□□□□□ -1.41
KTN1-223	ENST00000555573	GALNT8	Q9NY28	637 aa		6.23	□□□□□ -1.41
KTN1-223	ENST00000555573	KCNG1	Q9UIX4	513 aa		6.23	□□□□□ -1.41
KTN1-223	ENST00000555573	TEX51	A0A1B0GUA7	166 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	ABLIM3	O94929	683 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	IGFBP6	P24592	240 aa	Predicted RBP	6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	ITGA1	P56199	1179 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	ADCY2	Q08462	1091 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	CLUL1	Q15846	466 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	PITRM1	Q5JRX3	1037 aa		6.22	□□□□□ -1.41
KTN1-223	ENST00000555573	TMEM132E	Q6IEE7	984 aa		6.22	□□□□□ -1.41

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