RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	FGD2	Q7Z6J4	655 aa		7.32	□□□□□ -1.24
PSMC6-208	ENST00000554956	TP53I13	Q8NBR0	393 aa	Predicted RBP	7.32	□□□□□ -1.24
PSMC6-208	ENST00000554956	UHMK1	Q8TAS1	419 aa	Known RBP	7.32	□□□□□ -1.24
PSMC6-208	ENST00000554956	CLEC4D	Q8WXI8	215 aa		7.32	□□□□□ -1.24
PSMC6-208	ENST00000554956	ZBTB8A	Q96BR9	441 aa		7.32	□□□□□ -1.24
PSMC6-208	ENST00000554956	SCLY	Q96I15	445 aa		7.32	□□□□□ -1.24
PSMC6-208	ENST00000554956	CD244	Q9BZW8	370 aa		7.32	□□□□□ -1.24
PSMC6-208	ENST00000554956	NCOA5	Q9HCD5	579 aa	Known RBP	7.32	□□□□□ -1.24
PSMC6-208	ENST00000554956	DTL	Q9NZJ0	730 aa		7.32	□□□□□ -1.24
PSMC6-208	ENST00000554956	RBPJL	Q9UBG7	517 aa		7.32	□□□□□ -1.24
PSMC6-208	ENST00000554956	PRAG1	Q86YV5	1406 aa		7.32	□□□□□ -1.24
PSMC6-208	ENST00000554956	CDK12	Q9NYV4	1490 aa	Predicted RBP	7.31	□□□□□ -1.24
PSMC6-208	ENST00000554956	NHSL1	Q5SYE7	1610 aa		7.31	□□□□□ -1.24
PSMC6-208	ENST00000554956	KRTAP19-4	Q3LI73	84 aa		7.31	□□□□□ -1.24
PSMC6-208	ENST00000554956	TRIM61	Q5EBN2	209 aa		7.31	□□□□□ -1.24
PSMC6-208	ENST00000554956	CYP4F22	Q6NT55	531 aa		7.31	□□□□□ -1.24
PSMC6-208	ENST00000554956	TEPP	Q6URK8	271 aa		7.31	□□□□□ -1.24
PSMC6-208	ENST00000554956	SPATA31E1	Q6ZUB1	1445 aa		7.31	□□□□□ -1.24
PSMC6-208	ENST00000554956	ZC3H18	Q86VM9	953 aa	Known RBP	7.31	□□□□□ -1.24
PSMC6-208	ENST00000554956	NALCN	Q8IZF0	1738 aa		7.31	□□□□□ -1.24
PSMC6-208	ENST00000554956	PHOSPHO1	Q8TCT1	267 aa		7.31	□□□□□ -1.24
PSMC6-208	ENST00000554956	SH3RF2	Q8TEC5	729 aa		7.31	□□□□□ -1.24
PSMC6-208	ENST00000554956	TOE1	Q96GM8	510 aa	Known RBP	7.31	□□□□□ -1.24
PSMC6-208	ENST00000554956	MPHOSPH9	Q99550	1183 aa		7.31	□□□□□ -1.24
PSMC6-208	ENST00000554956	KRTAP9-9	Q9BYP9	154 aa		7.31	□□□□□ -1.24
PSMC6-208	ENST00000554956	KRTAP9-4	Q9BYQ2	154 aa		7.31	□□□□□ -1.24
PSMC6-208	ENST00000554956	DSE	Q9UL01	958 aa		7.31	□□□□□ -1.24
PSMC6-208	ENST00000554956	CBLC	Q9ULV8	474 aa		7.31	□□□□□ -1.24
PSMC6-208	ENST00000554956	ESYT3	A0FGR9	886 aa		7.3	□□□□□ -1.24
PSMC6-208	ENST00000554956	MAFK	O60675	156 aa		7.3	□□□□□ -1.24
PSMC6-208	ENST00000554956	LRG1	P02750	347 aa		7.3	□□□□□ -1.24
PSMC6-208	ENST00000554956	BMP7	P18075	431 aa		7.3	□□□□□ -1.24
PSMC6-208	ENST00000554956	ITGA1	P56199	1179 aa		7.3	□□□□□ -1.24
PSMC6-208	ENST00000554956	SAPCD2	Q86UD0	394 aa		7.3	□□□□□ -1.24
PSMC6-208	ENST00000554956	SIAH1	Q8IUQ4	282 aa		7.3	□□□□□ -1.24
PSMC6-208	ENST00000554956	ZC3H7A	Q8IWR0	971 aa	Known RBP	7.3	□□□□□ -1.24
PSMC6-208	ENST00000554956	NLGN1	Q8N2Q7	840 aa		7.3	□□□□□ -1.24
PSMC6-208	ENST00000554956	FBXW5	Q969U6	566 aa		7.3	□□□□□ -1.24
PSMC6-208	ENST00000554956	RNPC3	Q96LT9	517 aa	Known RBP	7.3	□□□□□ -1.24
PSMC6-208	ENST00000554956	C11orf84	Q9BUA3	381 aa	Predicted RBP	7.3	□□□□□ -1.24
PSMC6-208	ENST00000554956	MRPL4	Q9BYD3	311 aa	Known RBP	7.3	□□□□□ -1.24
PSMC6-208	ENST00000554956	CATSPERZ	Q9NTU4	200 aa		7.3	□□□□□ -1.24
PSMC6-208	ENST00000554956	SPATA6	Q9NWH7	488 aa	Predicted RBP	7.3	□□□□□ -1.24
PSMC6-208	ENST00000554956	WASF3	Q9UPY6	502 aa		7.3	□□□□□ -1.24
PSMC6-208	ENST00000554956	CCDC66	A2RUB6	948 aa		7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	KCNK3	O14649	394 aa		7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	WNT9A	O14904	365 aa		7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	PPP1R12A	O14974	1030 aa	Predicted RBP	7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	EFCAB14	O75071	495 aa		7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	PDE6A	P16499	860 aa		7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	KRT15	P19012	456 aa		7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	DNM2	P50570	870 aa		7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	NKX3-2	P78367	333 aa		7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	CISD2	Q8N5K1	135 aa	Known RBP	7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	LINC01356	Q8N9X3	169 aa		7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	SYT8	Q8NBV8	401 aa		7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	ZSWIM3	Q96MP5	696 aa		7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	CLUHP3	Q96NS8	147 aa		7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	TRIM39	Q9HCM9	518 aa		7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	COQ6	Q9Y2Z9	468 aa		7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	LRPPRC	P42704	1394 aa	Known RBP	7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	ABCC11	Q96J66	1382 aa		7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	MYOM2	P54296	1465 aa		7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	BCL9L	Q86UU0	1499 aa		7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	PXDN	Q92626	1479 aa		7.29	□□□□□ -1.24
PSMC6-208	ENST00000554956	TECPR2	O15040	1411 aa		7.28	□□□□□ -1.24
PSMC6-208	ENST00000554956	ATRN	O75882	1429 aa		7.28	□□□□□ -1.24
PSMC6-208	ENST00000554956	CCDC163	A0A0D9SF12	145 aa		7.28	□□□□□ -1.24
PSMC6-208	ENST00000554956	AMY2A	P04746	511 aa		7.28	□□□□□ -1.24
PSMC6-208	ENST00000554956	AMY2B	P19961	511 aa		7.28	□□□□□ -1.24
PSMC6-208	ENST00000554956	JAM2	P57087	298 aa		7.28	□□□□□ -1.24
PSMC6-208	ENST00000554956	TMC5	Q6UXY8	1006 aa		7.28	□□□□□ -1.24
PSMC6-208	ENST00000554956	ARHGAP36	Q6ZRI8	547 aa		7.28	□□□□□ -1.24
PSMC6-208	ENST00000554956	JAZF1	Q86VZ6	243 aa		7.28	□□□□□ -1.24
PSMC6-208	ENST00000554956	OSTM1	Q86WC4	334 aa		7.28	□□□□□ -1.24
PSMC6-208	ENST00000554956	PTRH1	Q86Y79	214 aa	Known RBP	7.28	□□□□□ -1.24
PSMC6-208	ENST00000554956	LINC00482	Q8N8I6	264 aa		7.28	□□□□□ -1.24
PSMC6-208	ENST00000554956	MAGEB10	Q96LZ2	347 aa	Predicted RBP	7.28	□□□□□ -1.24
PSMC6-208	ENST00000554956	TMEM260	Q9NX78	707 aa		7.28	□□□□□ -1.24
PSMC6-208	ENST00000554956	NPHP3	Q7Z494	1330 aa		7.27	□□□□□ -1.24
PSMC6-208	ENST00000554956	CCDC144A	A2RUR9	1427 aa		7.27	□□□□□ -1.24
PSMC6-208	ENST00000554956	LAMC1	P11047	1609 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	MAN2B1	O00754	1011 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	PLD2	O14939	933 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	ASMTL	O95671	621 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	CKM	P06732	381 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	NAT1	P18440	290 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	THBS2	P35442	1172 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	ST5	P78524	1137 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	CAP1	Q01518	475 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	ADAM9	Q13443	819 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	RTP5	Q14D33	572 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	GPR19	Q15760	415 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	ABHD17C	Q6PCB6	329 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	LIPI	Q6XZB0	460 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	KCTD1	Q719H9	257 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	PROSER1	Q86XN7	944 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	TRIM48	Q8IWZ4	208 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	KY	Q8NBH2	561 aa		7.27	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms