RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 NPTXRO95502 500 aa6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 PNLIPP16233 465 aa6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 YBX3P16989 372 aaKnown RBP eCLIP6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 SDHBP21912 280 aa6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 SPIRE1Q08AE8 756 aa6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 STRN3Q13033 797 aa6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 SNX17Q15036 470 aa6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 SEPT7Q16181 437 aaKnown RBP6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 TMEM177Q53S58 311 aa6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 MROH9Q5TGP6 573 aa6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 WWC2Q6AWC2 1192 aa6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 STRA8Q7Z7C7 330 aa6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 Q8N1Y9 231 aa6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 PIP4K2CQ8TBX8 421 aa6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 PNISRQ8TF01 805 aaKnown RBP6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 KIRREL1Q96J84 757 aa6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 RXFP1Q9HBX9 757 aa6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 CABP5Q9NP86 173 aa6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 KTN1Q86UP2 1357 aaKnown RBP6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 ABCC11Q96J66 1382 aa6.54□□□□□ -1.36
MTHFD1-206ENST00000554353 KIAA1210Q9ULL0 1709 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 BRWD3Q6RI45 1802 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 TECPR2O15040 1411 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 PIK3C2GO75747 1445 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 SMG6Q86US8 1419 aaKnown RBP6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 YTHDC2Q9H6S0 1430 aaKnown RBP6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 WNT9AO14904 365 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 PDE6AP16499 860 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 SKOR2Q2VWA4 1001 aaPredicted RBP6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 FYB2Q5VWT5 728 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 ERICH6BQ5W0A0 696 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 OVCH1Q7RTY7 1134 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 OSTM1Q86WC4 334 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 RIOX2Q8IUF8 465 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 C2orf69Q8N8R5 385 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 FLAD1Q8NFF5 587 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 PANK1Q8TE04 598 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 SHISA4Q96DD7 197 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 C14orf93Q9H972 538 aaKnown RBP6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 CRTAC1Q9NQ79 661 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 CHPF2Q9P2E5 772 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 OAS3Q9Y6K5 1087 aaKnown RBP6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 BRD4O60885 1362 aaPredicted RBP6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 PARD3Q8TEW0 1356 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 MYOM2P54296 1465 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 BCL9LQ86UU0 1499 aa6.53□□□□□ -1.36
MTHFD1-206ENST00000554353 KIF1AQ12756 1690 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 ATRNO75882 1429 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 ZNF891A8MT65 544 aaPredicted RBP6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 CBX4O00257 560 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 KRIT1O00522 736 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 KCNK3O14649 394 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 NKRFO15226 690 aaKnown RBP eCLIP6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 GLI4P10075 376 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 SCNN1BP51168 640 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 SART3Q15020 963 aaKnown RBP6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 RALBP1Q15311 655 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 STEAP3Q658P3 488 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 ARHGAP36Q6ZRI8 547 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 EP400NLQ6ZTU2 488 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 OTOP3Q7RTS5 596 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 KRT28Q7Z3Y7 464 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 NXPE1Q8N323 547 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 OR2W6PQ8NHA6 318 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 ATL2Q8NHH9 583 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 STAG1Q8WVM7 1258 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 IRF2BPLQ9H1B7 796 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 DBR1Q9UK59 544 aaKnown RBP6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 G3BP2Q9UN86 482 aaKnown RBP6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 ZKSCAN5Q9Y2L8 839 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 SIT1Q9Y3P8 196 aa6.52□□□□□ -1.37
MTHFD1-206ENST00000554353 RNF123Q5XPI4 1314 aa6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 MYBBP1AQ9BQG0 1328 aaKnown RBP6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 NUDT19A8MXV4 375 aa6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 TRAF5O00463 557 aa6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 KRT37O76014 449 aa6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 MAP4K4O95819 1239 aaPredicted RBP6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 JAM2P57087 298 aa6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 SAFB2Q14151 953 aaKnown RBP eCLIP6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 GPR19Q15760 415 aa6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 ADGRF1Q5T601 910 aa6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 SPTY2D1Q68D10 685 aaPredicted RBP6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 DDX42Q86XP3 938 aaKnown RBP eCLIP6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 PTRH1Q86Y79 214 aaKnown RBP6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 AFAP1L2Q8N4X5 818 aa6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 CHST14Q8NCH0 376 aa6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 USP7Q93009 1102 aa6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 NAP1L5Q96NT1 182 aaPredicted RBP6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 DDX56Q9NY93 547 aaKnown RBP6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 MCM8Q9UJA3 840 aa6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 DSEQ9UL01 958 aa6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 ATP8A1Q9Y2Q0 1164 aa6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 YBX2Q9Y2T7 364 aaKnown RBP6.51□□□□□ -1.37
MTHFD1-206ENST00000554353 SPATA31A3Q5VYP0 1347 aa6.5□□□□□ -1.37
MTHFD1-206ENST00000554353 UTRNP46939 3433 aa6.5□□□□□ -1.37
MTHFD1-206ENST00000554353 MYOM1P52179 1685 aa6.5□□□□□ -1.37
MTHFD1-206ENST00000554353 NRXN1Q9ULB1 1477 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms