RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 TMEM63CQ9P1W3 806 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 KCNH3Q9ULD8 1083 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 HPSEQ9Y251 543 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 MRVI1Q9Y6F6 885 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 KMT2EQ8IZD2 1858 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 TANC1Q9C0D5 1861 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 RIF1Q5UIP0 2472 aaKnown RBP16.24■□□□□ 0.19
SHMT2-208ENST00000553868 PLXNA3P51805 1871 aa16.23■□□□□ 0.19
SHMT2-208ENST00000553868 LINC01553A4QN01 128 aa16.23■□□□□ 0.19
SHMT2-208ENST00000553868 NR1I2O75469 434 aa16.23■□□□□ 0.19
SHMT2-208ENST00000553868 KRT37O76014 449 aa16.23■□□□□ 0.19
SHMT2-208ENST00000553868 KCNJ6P48051 423 aa16.23■□□□□ 0.19
SHMT2-208ENST00000553868 FXR2P51116 673 aaKnown RBP eCLIP16.23■□□□□ 0.19
SHMT2-208ENST00000553868 NDUFA8P51970 172 aa16.23■□□□□ 0.19
SHMT2-208ENST00000553868 WDR5P61964 334 aaKnown RBP16.23■□□□□ 0.19
SHMT2-208ENST00000553868 PRR16Q569H4 304 aa16.23■□□□□ 0.19
SHMT2-208ENST00000553868 HERC4Q5GLZ8 1057 aaPredicted RBP16.23■□□□□ 0.19
SHMT2-208ENST00000553868 ENGASEQ8NFI3 743 aa16.23■□□□□ 0.19
SHMT2-208ENST00000553868 TIGD1Q96MW7 591 aa16.23■□□□□ 0.19
SHMT2-208ENST00000553868 TGS1Q96RS0 853 aaKnown RBP16.23■□□□□ 0.19
SHMT2-208ENST00000553868 MPHOSPH6Q99547 160 aaKnown RBP16.23■□□□□ 0.19
SHMT2-208ENST00000553868 TNMDQ9H2S6 317 aa16.23■□□□□ 0.19
SHMT2-208ENST00000553868 CLSTN2Q9H4D0 955 aa16.23■□□□□ 0.19
SHMT2-208ENST00000553868 PXMP2Q9NR77 195 aa16.23■□□□□ 0.19
SHMT2-208ENST00000553868 PDGFCQ9NRA1 345 aa16.23■□□□□ 0.19
SHMT2-208ENST00000553868 USP25Q9UHP3 1055 aa16.23■□□□□ 0.19
SHMT2-208ENST00000553868 HOOK1Q9UJC3 728 aaKnown RBP16.23■□□□□ 0.19
SHMT2-208ENST00000553868 STK24Q9Y6E0 443 aa16.23■□□□□ 0.19
SHMT2-208ENST00000553868 CACNA1GO43497 2377 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 COL4A6Q14031 1691 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 SOWAHBA6NEL2 793 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 EDIL3O43854 480 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 CCND2P30279 289 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 UBA7P41226 1012 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 TXKP42681 527 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 PDIA5Q14554 519 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 ZSCAN23Q3MJ62 389 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 CEP55Q53EZ4 464 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 FAM117BQ6P1L5 589 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 RNF135Q8IUD6 432 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 DNERQ8NFT8 737 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 TAAR1Q96RJ0 339 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 C17orf80Q9BSJ5 609 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 KCNMB3Q9NPA1 279 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 COL20A1Q9P218 1284 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 ADD3Q9UEY8 706 aaKnown RBP16.22■□□□□ 0.19
SHMT2-208ENST00000553868 CCDC39Q9UFE4 941 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 PRKAG3Q9UGI9 489 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 PCDHA12Q9UN75 941 aa16.22■□□□□ 0.19
SHMT2-208ENST00000553868 MYO7AQ13402 2215 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 TMEM221A6NGB7 291 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 M0R296 226 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 SLC26A4O43511 780 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 ZEB2O60315 1214 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 STAM2O75886 525 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 ZNF202O95125 648 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 SUPT20HL2P0C7V6 817 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 EIF2AK2P19525 551 aaKnown RBP16.21■□□□□ 0.19
SHMT2-208ENST00000553868 RFC2P35250 354 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 GRIN1Q05586 938 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 SNW1Q13573 536 aaKnown RBP16.21■□□□□ 0.19
SHMT2-208ENST00000553868 CLUL1Q15846 466 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 TCTN1Q2MV58 587 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 KANK3Q6NY19 840 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 ASCL5Q7RTU5 278 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 PLA2G4DQ86XP0 818 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 EDAQ92838 391 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 ATOH1Q92858 354 aaPredicted RBP16.21■□□□□ 0.19
SHMT2-208ENST00000553868 IWS1Q96ST2 819 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 MXRA8Q9BRK3 442 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 SDF4Q9BRK5 362 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 PDCD2LQ9BRP1 358 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 SEZ6LQ9BYH1 1024 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 CCSER1Q9C0I3 900 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 TTC12Q9H892 705 aaPredicted RBP16.21■□□□□ 0.19
SHMT2-208ENST00000553868 ZFHX4Q86UP3 3567 aa16.21■□□□□ 0.19
SHMT2-208ENST00000553868 DNAH14Q0VDD8 3507 aa16.2■□□□□ 0.18
SHMT2-208ENST00000553868 TRIP12Q14669 1992 aaPredicted RBP16.2■□□□□ 0.18
SHMT2-208ENST00000553868 FAM186AA6NE01 2351 aa16.2■□□□□ 0.18
SHMT2-208ENST00000553868 FAM86B1E9PN63 330 aa16.2■□□□□ 0.18
SHMT2-208ENST00000553868 MEIS1O00470 390 aa16.2■□□□□ 0.18
SHMT2-208ENST00000553868 BAIAP3O94812 1187 aa16.2■□□□□ 0.18
SHMT2-208ENST00000553868 FAM86B2P0C5J1 330 aa16.2■□□□□ 0.18
SHMT2-208ENST00000553868 TECP42680 631 aa16.2■□□□□ 0.18
SHMT2-208ENST00000553868 VCPP55072 806 aaKnown RBP16.2■□□□□ 0.18
SHMT2-208ENST00000553868 PGM5Q15124 567 aa16.2■□□□□ 0.18
SHMT2-208ENST00000553868 IL17AQ16552 155 aa16.2■□□□□ 0.18
SHMT2-208ENST00000553868 TCEAL5Q5H9L2 206 aa16.2■□□□□ 0.18
SHMT2-208ENST00000553868 FAM47CQ5HY64 1035 aa16.2■□□□□ 0.18
SHMT2-208ENST00000553868 SPECC1Q5M775 1068 aa16.2■□□□□ 0.18
SHMT2-208ENST00000553868 EEPD1Q7L9B9 569 aa16.2■□□□□ 0.18
SHMT2-208ENST00000553868 ERMP1Q7Z2K6 904 aa16.2■□□□□ 0.18
SHMT2-208ENST00000553868 BMP8AQ7Z5Y6 402 aa16.2■□□□□ 0.18
SHMT2-208ENST00000553868 IGSF22Q8N9C0 903 aa16.2■□□□□ 0.18
SHMT2-208ENST00000553868 RASSF8Q8NHQ8 419 aa16.2■□□□□ 0.18
SHMT2-208ENST00000553868 LRWD1Q9UFC0 647 aa16.2■□□□□ 0.18
SHMT2-208ENST00000553868 VPS13AQ96RL7 3174 aa16.2■□□□□ 0.18
SHMT2-208ENST00000553868 MYH7BA7E2Y1 1941 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 IGLV3-22A0A075B6J6 115 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 LOC102724159A0A0B4J2E5 919 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms