RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 INF2Q27J81 1249 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 MFSD5Q6N075 450 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 MOXD1Q6UVY6 613 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 PIK3AP1Q6ZUJ8 805 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 RSPH3Q86UC2 560 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 SESTD1Q86VW0 696 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 CKAP2LQ8IYA6 745 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 SMAP1Q8IYB5 467 aaPredicted RBP9.42□□□□□ -0.9
PSEN1-209ENST00000553855 DIS3L2Q8IYB7 885 aaKnown RBP9.42□□□□□ -0.9
PSEN1-209ENST00000553855 TDHQ8IZJ6 230 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 CYP2W1Q8TAV3 490 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 CAGE1Q8TC20 777 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 TRIM43Q96BQ3 446 aaPredicted RBP9.42□□□□□ -0.9
PSEN1-209ENST00000553855 KIF2CQ99661 725 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 VRTNQ9H8Y1 702 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 TRMT13Q9NUP7 481 aaKnown RBP9.42□□□□□ -0.9
PSEN1-209ENST00000553855 MAP10Q9P2G4 905 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 HDAC6Q9UBN7 1215 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 DDX25Q9UHL0 483 aaKnown RBP9.42□□□□□ -0.9
PSEN1-209ENST00000553855 GTF2IRD1Q9UHL9 959 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 TBX21Q9UL17 535 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 SMC3Q9UQE7 1217 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 PCDHB3Q9Y5E6 796 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 GRIN2DO15399 1336 aa9.41□□□□□ -0.9
PSEN1-209ENST00000553855 NRCAMQ92823 1304 aa9.41□□□□□ -0.9
PSEN1-209ENST00000553855 RRN3P2A6NIE6 340 aa9.41□□□□□ -0.9
PSEN1-209ENST00000553855 H3BQV1 296 aa9.41□□□□□ -0.9
PSEN1-209ENST00000553855 HAS3O00219 553 aa9.41□□□□□ -0.9
PSEN1-209ENST00000553855 CCNT1O60563 726 aaKnown RBP9.41□□□□□ -0.9
PSEN1-209ENST00000553855 PARNO95453 639 aaKnown RBP9.41□□□□□ -0.9
PSEN1-209ENST00000553855 CYP2C9P11712 490 aa9.41□□□□□ -0.9
PSEN1-209ENST00000553855 FDPSP14324 419 aaKnown RBP9.41□□□□□ -0.9
PSEN1-209ENST00000553855 SFNP31947 248 aa9.41□□□□□ -0.9
PSEN1-209ENST00000553855 SLC26A2P50443 739 aa9.41□□□□□ -0.9
PSEN1-209ENST00000553855 STAT5BP51692 787 aa9.41□□□□□ -0.9
PSEN1-209ENST00000553855 JAK3P52333 1124 aa9.41□□□□□ -0.9
PSEN1-209ENST00000553855 PTK7Q13308 1070 aa9.41□□□□□ -0.9
PSEN1-209ENST00000553855 Q4G0T1 1027 aa9.41□□□□□ -0.9
PSEN1-209ENST00000553855 HABP4Q5JVS0 413 aaKnown RBP9.41□□□□□ -0.9
PSEN1-209ENST00000553855 LRCH2Q5VUJ6 765 aa9.41□□□□□ -0.9
PSEN1-209ENST00000553855 KRT40Q6A162 431 aa9.41□□□□□ -0.9
PSEN1-209ENST00000553855 ZNF746Q6NUN9 644 aaPredicted RBP9.41□□□□□ -0.9
PSEN1-209ENST00000553855 KAT2BQ92831 832 aa9.41□□□□□ -0.9
PSEN1-209ENST00000553855 ATP6V0A1Q93050 837 aa9.41□□□□□ -0.9
PSEN1-209ENST00000553855 TMX3Q96JJ7 454 aa9.41□□□□□ -0.9
PSEN1-209ENST00000553855 RIT2Q99578 217 aa9.41□□□□□ -0.9
PSEN1-209ENST00000553855 C16orf70Q9BSU1 422 aa9.41□□□□□ -0.9
PSEN1-209ENST00000553855 NOL7Q9UMY1 257 aaKnown RBP9.41□□□□□ -0.9
PSEN1-209ENST00000553855 EMSYQ7Z589 1322 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 IGLV3-22A0A075B6J6 115 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 GSTTP1A0A1W2PQM5 241 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 WDR64B1ANS9 1081 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 DKC1O60832 514 aaKnown RBP eCLIP9.4□□□□□ -0.9
PSEN1-209ENST00000553855 RPLP2P05387 115 aaKnown RBP9.4□□□□□ -0.9
PSEN1-209ENST00000553855 PFKMP08237 780 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 SMIM10L2AP0DMW4 78 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 SMIM10L2BP0DMW5 78 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 ACTN1P12814 892 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 MARK3P27448 753 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 CYP2C18P33260 490 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 RFC2P35250 354 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 CCL23P55773 120 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 PPFIA1Q13136 1202 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 ITGB3BPQ13352 177 aaPredicted RBP9.4□□□□□ -0.9
PSEN1-209ENST00000553855 ELOAQ14241 798 aaKnown RBP9.4□□□□□ -0.9
PSEN1-209ENST00000553855 PPP4R3AQ6IN85 833 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 GDF6Q6KF10 455 aaPredicted RBP9.4□□□□□ -0.9
PSEN1-209ENST00000553855 PDXDC2PQ6P474 469 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 PSRC1Q6PGN9 363 aaPredicted RBP9.4□□□□□ -0.9
PSEN1-209ENST00000553855 PLPPR4Q7Z2D5 763 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 TRIM50Q86XT4 487 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 AFAP1L1Q8TED9 768 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 CRYGNQ8WXF5 182 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 FAM20AQ96MK3 541 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 NOC4LQ9BVI4 516 aaKnown RBP9.4□□□□□ -0.9
PSEN1-209ENST00000553855 FTOQ9C0B1 505 aaKnown RBP eCLIP9.4□□□□□ -0.9
PSEN1-209ENST00000553855 BCAS3Q9H6U6 928 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 ZNF302Q9NR11 478 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 PCDHA10Q9Y5I2 948 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 KIAA1217Q5T5P2 1943 aa9.4□□□□□ -0.9
PSEN1-209ENST00000553855 CYP3A7-CYP3A51PA0A087WV96 503 aa9.39□□□□□ -0.91
PSEN1-209ENST00000553855 BTBD18B2RXH4 712 aa9.39□□□□□ -0.91
PSEN1-209ENST00000553855 M0QZ92 97 aa9.39□□□□□ -0.91
PSEN1-209ENST00000553855 M0R2N6 131 aa9.39□□□□□ -0.91
PSEN1-209ENST00000553855 MSH4O15457 936 aa9.39□□□□□ -0.91
PSEN1-209ENST00000553855 CHMP2AO43633 222 aa9.39□□□□□ -0.91
PSEN1-209ENST00000553855 DTNBO60941 627 aa9.39□□□□□ -0.91
PSEN1-209ENST00000553855 TDP2O95551 362 aa9.39□□□□□ -0.91
PSEN1-209ENST00000553855 FGBP02675 491 aa9.39□□□□□ -0.91
PSEN1-209ENST00000553855 HSP90AA1P07900 732 aaKnown RBP9.39□□□□□ -0.91
PSEN1-209ENST00000553855 CSF2RAP15509 400 aa9.39□□□□□ -0.91
PSEN1-209ENST00000553855 ATP2B1P20020 1258 aa9.39□□□□□ -0.91
PSEN1-209ENST00000553855 CYP3A7P24462 503 aa9.39□□□□□ -0.91
PSEN1-209ENST00000553855 IGBP1P78318 339 aa9.39□□□□□ -0.91
PSEN1-209ENST00000553855 GUCY1B3Q02153 619 aa9.39□□□□□ -0.91
PSEN1-209ENST00000553855 NR5A1Q13285 461 aa9.39□□□□□ -0.91
PSEN1-209ENST00000553855 MCTP1Q6DN14 999 aa9.39□□□□□ -0.91
PSEN1-209ENST00000553855 SWSAP1Q6NVH7 229 aa9.39□□□□□ -0.91
PSEN1-209ENST00000553855 TAF2Q6P1X5 1199 aa9.39□□□□□ -0.91
PSEN1-209ENST00000553855 MIER3Q7Z3K6 550 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms