RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 CYFIP1Q7L576 1253 aa17.84■□□□□ 0.45
CHMP1A-206ENST00000549139 RNF135Q8IUD6 432 aa17.84■□□□□ 0.45
CHMP1A-206ENST00000549139 PRSS33Q8NF86 280 aa17.84■□□□□ 0.45
CHMP1A-206ENST00000549139 CYP2W1Q8TAV3 490 aa17.84■□□□□ 0.45
CHMP1A-206ENST00000549139 LMAN2LQ9H0V9 348 aa17.84■□□□□ 0.45
CHMP1A-206ENST00000549139 RC3H2Q9HBD1 1191 aaKnown RBP17.84■□□□□ 0.45
CHMP1A-206ENST00000549139 KCNH7Q9NS40 1196 aa17.84■□□□□ 0.45
CHMP1A-206ENST00000549139 KCNJ14Q9UNX9 436 aa17.84■□□□□ 0.45
CHMP1A-206ENST00000549139 TTC3P53804 2025 aa17.84■□□□□ 0.45
CHMP1A-206ENST00000549139 WDR81Q562E7 1941 aa17.83■□□□□ 0.44
CHMP1A-206ENST00000549139 H3BRB1 525 aa17.83■□□□□ 0.44
CHMP1A-206ENST00000549139 JAK2O60674 1132 aa17.83■□□□□ 0.44
CHMP1A-206ENST00000549139 RB1P06400 928 aa17.83■□□□□ 0.44
CHMP1A-206ENST00000549139 CTSHP09668 335 aa17.83■□□□□ 0.44
CHMP1A-206ENST00000549139 ARP10275 920 aa17.83■□□□□ 0.44
CHMP1A-206ENST00000549139 CIITAP33076 1130 aa17.83■□□□□ 0.44
CHMP1A-206ENST00000549139 BMPR1AP36894 532 aa17.83■□□□□ 0.44
CHMP1A-206ENST00000549139 CLUL1Q15846 466 aa17.83■□□□□ 0.44
CHMP1A-206ENST00000549139 FAM26DQ5JW98 314 aa17.83■□□□□ 0.44
CHMP1A-206ENST00000549139 BMP8AQ7Z5Y6 402 aa17.83■□□□□ 0.44
CHMP1A-206ENST00000549139 POP1Q99575 1024 aaKnown RBP17.83■□□□□ 0.44
CHMP1A-206ENST00000549139 TUT1Q9H6E5 874 aaKnown RBP17.83■□□□□ 0.44
CHMP1A-206ENST00000549139 FAM86B1E9PN63 330 aa17.82■□□□□ 0.44
CHMP1A-206ENST00000549139 NOP56O00567 594 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-206ENST00000549139 TBX10O75333 385 aa17.82■□□□□ 0.44
CHMP1A-206ENST00000549139 LGALS2P05162 132 aa17.82■□□□□ 0.44
CHMP1A-206ENST00000549139 FAM86B2P0C5J1 330 aa17.82■□□□□ 0.44
CHMP1A-206ENST00000549139 CTNNB1P35222 781 aa17.82■□□□□ 0.44
CHMP1A-206ENST00000549139 GTF2F1P35269 517 aaKnown RBP eCLIP17.82■□□□□ 0.44
CHMP1A-206ENST00000549139 ADAM17P78536 824 aa17.82■□□□□ 0.44
CHMP1A-206ENST00000549139 HMGN5P82970 282 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-206ENST00000549139 SMAD4Q13485 552 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-206ENST00000549139 PLA2G4DQ86XP0 818 aa17.82■□□□□ 0.44
CHMP1A-206ENST00000549139 FIBCD1Q8N539 461 aa17.82■□□□□ 0.44
CHMP1A-206ENST00000549139 TBCKQ8TEA7 893 aa17.82■□□□□ 0.44
CHMP1A-206ENST00000549139 EDAQ92838 391 aa17.82■□□□□ 0.44
CHMP1A-206ENST00000549139 APBB2Q92870 758 aa17.82■□□□□ 0.44
CHMP1A-206ENST00000549139 CLP1Q92989 425 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-206ENST00000549139 GPR20Q99678 358 aa17.82■□□□□ 0.44
CHMP1A-206ENST00000549139 C11orf84Q9BUA3 381 aaPredicted RBP17.82■□□□□ 0.44
CHMP1A-206ENST00000549139 GJB4Q9NTQ9 266 aa17.82■□□□□ 0.44
CHMP1A-206ENST00000549139 NFASCO94856 1347 aa17.81■□□□□ 0.44
CHMP1A-206ENST00000549139 MYH9P35579 1960 aaKnown RBP17.81■□□□□ 0.44
CHMP1A-206ENST00000549139 IGLV3-22A0A075B6J6 115 aa17.81■□□□□ 0.44
CHMP1A-206ENST00000549139 EDIL3O43854 480 aa17.81■□□□□ 0.44
CHMP1A-206ENST00000549139 CAMK1Q14012 370 aa17.81■□□□□ 0.44
CHMP1A-206ENST00000549139 IER5LQ5T953 404 aa17.81■□□□□ 0.44
CHMP1A-206ENST00000549139 KRT25Q7Z3Z0 450 aa17.81■□□□□ 0.44
CHMP1A-206ENST00000549139 AGO4Q9HCK5 861 aaKnown RBP17.81■□□□□ 0.44
CHMP1A-206ENST00000549139 MYO15AQ9UKN7 3530 aa17.8■□□□□ 0.44
CHMP1A-206ENST00000549139 FAM186AA6NE01 2351 aa17.8■□□□□ 0.44
CHMP1A-206ENST00000549139 LINC01565O15544 149 aa17.8■□□□□ 0.44
CHMP1A-206ENST00000549139 CD2BP2O95400 341 aaKnown RBP17.8■□□□□ 0.44
CHMP1A-206ENST00000549139 SETQ01105 290 aaPredicted RBP17.8■□□□□ 0.44
CHMP1A-206ENST00000549139 ADAM15Q13444 863 aa17.8■□□□□ 0.44
CHMP1A-206ENST00000549139 TRIM29Q14134 588 aa17.8■□□□□ 0.44
CHMP1A-206ENST00000549139 NONOQ15233 471 aaKnown RBP eCLIP17.8■□□□□ 0.44
CHMP1A-206ENST00000549139 SEPT1Q8WYJ6 367 aa17.8■□□□□ 0.44
CHMP1A-206ENST00000549139 TMX3Q96JJ7 454 aa17.8■□□□□ 0.44
CHMP1A-206ENST00000549139 MSLNLQ96KJ4 702 aa17.8■□□□□ 0.44
CHMP1A-206ENST00000549139 SETD4Q9NVD3 440 aa17.8■□□□□ 0.44
CHMP1A-206ENST00000549139 RWDD3Q9Y3V2 267 aa17.8■□□□□ 0.44
CHMP1A-206ENST00000549139 ADGRA3Q8IWK6 1321 aa17.79■□□□□ 0.44
CHMP1A-206ENST00000549139 EYA4O95677 639 aa17.79■□□□□ 0.44
CHMP1A-206ENST00000549139 CHRNA1P02708 482 aa17.79■□□□□ 0.44
CHMP1A-206ENST00000549139 MMP1P03956 469 aa17.79■□□□□ 0.44
CHMP1A-206ENST00000549139 KRT2P35908 639 aa17.79■□□□□ 0.44
CHMP1A-206ENST00000549139 OXER1Q8TDS5 423 aa17.79■□□□□ 0.44
CHMP1A-206ENST00000549139 ZNF689Q96CS4 500 aaPredicted RBP17.79■□□□□ 0.44
CHMP1A-206ENST00000549139 SDF4Q9BRK5 362 aa17.79■□□□□ 0.44
CHMP1A-206ENST00000549139 BRMS1Q9HCU9 246 aa17.79■□□□□ 0.44
CHMP1A-206ENST00000549139 ALG13Q9NP73 1137 aaKnown RBP17.79■□□□□ 0.44
CHMP1A-206ENST00000549139 PKD2L1Q9P0L9 805 aa17.79■□□□□ 0.44
CHMP1A-206ENST00000549139 SLC9A2Q9UBY0 812 aa17.79■□□□□ 0.44
CHMP1A-206ENST00000549139 CD207Q9UJ71 328 aa17.79■□□□□ 0.44
CHMP1A-206ENST00000549139 CYP3A7-CYP3A51PA0A087WV96 503 aa17.78■□□□□ 0.44
CHMP1A-206ENST00000549139 CCDC194A0A1B0GVG4 234 aa17.78■□□□□ 0.44
CHMP1A-206ENST00000549139 GSTTP1A0A1W2PQM5 241 aa17.78■□□□□ 0.44
CHMP1A-206ENST00000549139 CYP3A7P24462 503 aa17.78■□□□□ 0.44
CHMP1A-206ENST00000549139 PTPN5P54829 565 aa17.78■□□□□ 0.44
CHMP1A-206ENST00000549139 TCF15Q12870 199 aa17.78■□□□□ 0.44
CHMP1A-206ENST00000549139 ITGB3BPQ13352 177 aaPredicted RBP17.78■□□□□ 0.44
CHMP1A-206ENST00000549139 PRR16Q569H4 304 aa17.78■□□□□ 0.44
CHMP1A-206ENST00000549139 MOXD1Q6UVY6 613 aa17.78■□□□□ 0.44
CHMP1A-206ENST00000549139 TRIM67Q6ZTA4 783 aa17.78■□□□□ 0.44
CHMP1A-206ENST00000549139 JPH1Q9HDC5 661 aaPredicted RBP17.78■□□□□ 0.44
CHMP1A-206ENST00000549139 TELO2Q9Y4R8 837 aa17.78■□□□□ 0.44
CHMP1A-206ENST00000549139 KMT2EQ8IZD2 1858 aa17.78■□□□□ 0.44
CHMP1A-206ENST00000549139 TMEM221A6NGB7 291 aa17.77■□□□□ 0.44
CHMP1A-206ENST00000549139 M0R296 226 aa17.77■□□□□ 0.44
CHMP1A-206ENST00000549139 IPO5O00410 1097 aaKnown RBP17.77■□□□□ 0.44
CHMP1A-206ENST00000549139 DHX15O43143 795 aaKnown RBP17.77■□□□□ 0.44
CHMP1A-206ENST00000549139 GNAT1P11488 350 aa17.77■□□□□ 0.44
CHMP1A-206ENST00000549139 TCF7P36402 384 aaPredicted RBP17.77■□□□□ 0.44
CHMP1A-206ENST00000549139 SP4Q02446 784 aa17.77■□□□□ 0.44
CHMP1A-206ENST00000549139 INF2Q27J81 1249 aa17.77■□□□□ 0.44
CHMP1A-206ENST00000549139 Q4G0T1 1027 aa17.77■□□□□ 0.44
CHMP1A-206ENST00000549139 FAM184AQ8NB25 1140 aa17.77■□□□□ 0.44
CHMP1A-206ENST00000549139 LMBR1Q8WVP7 490 aa17.77■□□□□ 0.44
CHMP1A-206ENST00000549139 TNFRSF25Q93038 417 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms