RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 CENPOQ9BU64 300 aa7.27□□□□□ -1.24
NECAP1-208ENST00000545807 XPO4Q9C0E2 1151 aaKnown RBP7.27□□□□□ -1.24
NECAP1-208ENST00000545807 ZSWIM4Q9H7M6 989 aa7.27□□□□□ -1.24
NECAP1-208ENST00000545807 SERPINB13Q9UIV8 391 aa7.27□□□□□ -1.24
NECAP1-208ENST00000545807 CFAP45Q9UL16 551 aa7.27□□□□□ -1.24
NECAP1-208ENST00000545807 ZNF148Q9UQR1 794 aa7.27□□□□□ -1.24
NECAP1-208ENST00000545807 TNS1Q9HBL0 1735 aaKnown RBP7.27□□□□□ -1.25
NECAP1-208ENST00000545807 SCN9AQ15858 1988 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 TMEM110-MUSTN1A8MSY1 372 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 USP17L5A8MUK1 530 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 BIRC5O15392 142 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 ORC4O43929 436 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 MTRF1O75570 445 aaKnown RBP7.27□□□□□ -1.25
NECAP1-208ENST00000545807 FLOT1O75955 427 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 RHOXF2BP0C7M4 288 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 SP100P23497 879 aaPredicted RBP7.27□□□□□ -1.25
NECAP1-208ENST00000545807 CCND1P24385 295 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 SBK1Q52WX2 424 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 ZNF362Q5T0B9 420 aaPredicted RBP7.27□□□□□ -1.25
NECAP1-208ENST00000545807 STRIP1Q5VSL9 837 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 ATL3Q6DD88 541 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 OR52E8Q6IFG1 317 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 NEPROQ6NW34 567 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 ZNF554Q86TJ5 538 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 NIM1KQ8IY84 436 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 SPICE1Q8N0Z3 855 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 PDILTQ8N807 584 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 RNF25Q96BH1 459 aaPredicted RBP7.27□□□□□ -1.25
NECAP1-208ENST00000545807 RHOXF2Q9BQY4 288 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 TAOK3Q9H2K8 898 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 IKBKBO14920 756 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 LDHAP00338 332 aaKnown RBP7.27□□□□□ -1.25
NECAP1-208ENST00000545807 EGFRP00533 1210 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 MYBL1P10243 752 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 TOP1P11387 765 aaKnown RBP7.27□□□□□ -1.25
NECAP1-208ENST00000545807 MCCD1P59942 119 aaPredicted RBP7.27□□□□□ -1.25
NECAP1-208ENST00000545807 IKQ13123 557 aaPredicted RBP7.27□□□□□ -1.25
NECAP1-208ENST00000545807 EIF2B5Q13144 721 aaKnown RBP7.27□□□□□ -1.25
NECAP1-208ENST00000545807 EARS2Q5JPH6 523 aaKnown RBP7.27□□□□□ -1.25
NECAP1-208ENST00000545807 CFAP157Q5JU67 520 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 KCTD1Q719H9 257 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 CCDC12Q8WUD4 166 aaPredicted RBP7.27□□□□□ -1.25
NECAP1-208ENST00000545807 JDP2Q8WYK2 163 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 SHISA4Q96DD7 197 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 FGD4Q96M96 766 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 NAP1L3Q99457 506 aaPredicted RBP7.27□□□□□ -1.25
NECAP1-208ENST00000545807 TCHPQ9BT92 498 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 FAM167BQ9BTA0 163 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 VCX3BQ9H321 246 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 SYNCQ9H7C4 482 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 VCX3AQ9NNX9 186 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 RHBDL2Q9NX52 303 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 PCDHA7Q9UN72 937 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 FZD1Q9UP38 647 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 R3HDM2Q9Y2K5 976 aaKnown RBP7.27□□□□□ -1.25
NECAP1-208ENST00000545807 SLC30A1Q9Y6M5 507 aa7.27□□□□□ -1.25
NECAP1-208ENST00000545807 GAKO14976 1311 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 WDR19Q8NEZ3 1342 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 CTAGE15A4D2H0 777 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 C5orf60A6NFR6 353 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 TTI1O43156 1089 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 KDM1AO60341 852 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 PFDN1O60925 122 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 PPP1R37O75864 691 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 STK10O94804 968 aaKnown RBP7.26□□□□□ -1.25
NECAP1-208ENST00000545807 HLA-DOAP06340 250 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 GSTA1P08263 222 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 MSL3P1P0C860 447 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 CTAGE8P0CG41 777 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 TAL1P17542 331 aaPredicted RBP7.26□□□□□ -1.25
NECAP1-208ENST00000545807 ENDOUP21128 410 aaKnown RBP7.26□□□□□ -1.25
NECAP1-208ENST00000545807 USP14P54578 494 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 CSE1LP55060 971 aaKnown RBP7.26□□□□□ -1.25
NECAP1-208ENST00000545807 POLE2P56282 527 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 CXCL9Q07325 125 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 DLGAP5Q15398 846 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 ZNF174Q15697 407 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 SH2D4BQ5SQS7 431 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 ARHGAP27Q6ZUM4 889 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 CTAGE6Q86UF2 777 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 BPHLQ86WA6 291 aaPredicted RBP7.26□□□□□ -1.25
NECAP1-208ENST00000545807 CTAGE4Q8IX94 777 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 TTC30BQ8N4P2 665 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 SYT2Q8N9I0 419 aaPredicted RBP7.26□□□□□ -1.25
NECAP1-208ENST00000545807 NUP88Q99567 741 aaPredicted RBP7.26□□□□□ -1.25
NECAP1-208ENST00000545807 CGREF1Q99674 301 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 CCDC68Q9H2F9 335 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 LRRC42Q9Y546 428 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 KLRF2D3W0D1 207 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 SPTLC2O15270 562 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 UPP2O95045 317 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 DEXIO95424 95 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 GEMIN4P57678 1058 aaKnown RBP7.26□□□□□ -1.25
NECAP1-208ENST00000545807 ITGA7Q13683 1181 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 PRKG1Q13976 671 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 CNGA3Q16281 694 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 INAQ16352 499 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 FOXB2Q5VYV0 432 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 ANO1Q5XXA6 986 aa7.26□□□□□ -1.25
NECAP1-208ENST00000545807 TTBK2Q6IQ55 1244 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms